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The map label for this gene is viuB [H]

Identifier: 156978115

GI number: 156978115

Start: 2017235

End: 2018053

Strand: Direct

Name: viuB [H]

Synonym: VIBHAR_06920

Alternate gene names: 156978115

Gene position: 2017235-2018053 (Clockwise)

Preceding gene: 156978114

Following gene: 156978120

Centisome position: 91.53

GC content: 49.08

Gene sequence:

>819_bases
ATGCGAAAGAGAATTGTTATCAAAAATCGCAAGGTAAAAACTAAAGTGAAAAAGAAGCTACAACCTAAAAGTCTCGTGAT
CAAAAAAACACAAACCATTACGCCGAACATGCAACGCATTACTCTGCAGGGCGAGGCGTTAGGCAATTTTCCGCTCGATT
GCGAAGGCAGCTATGTTAAGTTGCTGTTCAACGAAGTTGGGGGGACAGATATCCAAGGCTTTTCTGAGGAAAATCGCCCA
GTAATGCGCACTTACACCATTCGCCGCTTCGATCCACAGGCATGCACGATTGAAGTCGACTTCGTACGTCACATCACCAA
AGATCTACAATGTGGCTTTGCGGCGCGCTGGGCAATGGCGGCGAAAGAAGGCGACACAATCAGCATAGTAGGCCCTGGTA
GCATTTCGAACCTTAACACAGACGCAGATTGGTTCTTTATGGCAGCGGATATGACGGCGCTGCCTGCTCTATCTGCAAAA
ATTCGTACTCTGCCAGCCGACGCAAAAGGCTATGCGGTGATCAGCGTAATTTCTGAGGCGGATATTCAACCTATCGAAGC
GCCGGCAGGCATGGAGCTTCATTGGGTTACTGAGCAACCTCTCGCAGACAAAGTTCGTGAACTTGAATGGCAGCAAGGTG
AAGCCGCGGTGTGGTGTGCTTGTGAATTCGATTCAATGCGCGCACTGCGTCAGTACTTCCGCAACGAAATGGATGTAGAC
CGCGAAAACATCTACATCAGCAGCTATTGGAAACAGGGAGTGTCGGAAGACGGCCACAAGGTCATCAAGCGCGAAGATGC
AGAGTTAAACGAGCAGTAA

Upstream 100 bases:

>100_bases
AAATTCGTGATGTTTTTTGAAATGCTGACTTTTGCGAACCGATGAAGGTGTAAAGGTAGGTAAAAATGCTGTTTGGCCGT
ACAATTAGTTGTTACGATTA

Downstream 100 bases:

>100_bases
TTCCCACTGACAAAAAATAAAAGCCAAGTCGCTTTCATAGCAACTTGGCTTATTTTTCTCATTTAGCCTGTCTCTCAGTT
CATGTTTTCAGCCAAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRKRIVIKNRKVKTKVKKKLQPKSLVIKKTQTITPNMQRITLQGEALGNFPLDCEGSYVKLLFNEVGGTDIQGFSEENRP
VMRTYTIRRFDPQACTIEVDFVRHITKDLQCGFAARWAMAAKEGDTISIVGPGSISNLNTDADWFFMAADMTALPALSAK
IRTLPADAKGYAVISVISEADIQPIEAPAGMELHWVTEQPLADKVRELEWQQGEAAVWCACEFDSMRALRQYFRNEMDVD
RENIYISSYWKQGVSEDGHKVIKREDAELNEQ

Sequences:

>Translated_272_residues
MRKRIVIKNRKVKTKVKKKLQPKSLVIKKTQTITPNMQRITLQGEALGNFPLDCEGSYVKLLFNEVGGTDIQGFSEENRP
VMRTYTIRRFDPQACTIEVDFVRHITKDLQCGFAARWAMAAKEGDTISIVGPGSISNLNTDADWFFMAADMTALPALSAK
IRTLPADAKGYAVISVISEADIQPIEAPAGMELHWVTEQPLADKVRELEWQQGEAAVWCACEFDSMRALRQYFRNEMDVD
RENIYISSYWKQGVSEDGHKVIKREDAELNEQ
>Mature_272_residues
MRKRIVIKNRKVKTKVKKKLQPKSLVIKKTQTITPNMQRITLQGEALGNFPLDCEGSYVKLLFNEVGGTDIQGFSEENRP
VMRTYTIRRFDPQACTIEVDFVRHITKDLQCGFAARWAMAAKEGDTISIVGPGSISNLNTDADWFFMAADMTALPALSAK
IRTLPADAKGYAVISVISEADIQPIEAPAGMELHWVTEQPLADKVRELEWQQGEAAVWCACEFDSMRALRQYFRNEMDVD
RENIYISSYWKQGVSEDGHKVIKREDAELNEQ

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=254, Percent_Identity=23.6220472440945, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 30837; Mature: 30837

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRIVIKNRKVKTKVKKKLQPKSLVIKKTQTITPNMQRITLQGEALGNFPLDCEGSYVK
CCCEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEE
LLFNEVGGTDIQGFSEENRPVMRTYTIRRFDPQACTIEVDFVRHITKDLQCGFAARWAMA
EEEHHCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEHHHHHHHHHHHHCCHHHHHHHH
AKEGDTISIVGPGSISNLNTDADWFFMAADMTALPALSAKIRTLPADAKGYAVISVISEA
CCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEECCCCCCCEEEEEEECCC
DIQPIEAPAGMELHWVTEQPLADKVRELEWQQGEAAVWCACEFDSMRALRQYFRNEMDVD
CCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHCCCC
RENIYISSYWKQGVSEDGHKVIKREDAELNEQ
HHEEEEEHHHHCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MRKRIVIKNRKVKTKVKKKLQPKSLVIKKTQTITPNMQRITLQGEALGNFPLDCEGSYVK
CCCEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEE
LLFNEVGGTDIQGFSEENRPVMRTYTIRRFDPQACTIEVDFVRHITKDLQCGFAARWAMA
EEEHHCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEHHHHHHHHHHHHCCHHHHHHHH
AKEGDTISIVGPGSISNLNTDADWFFMAADMTALPALSAKIRTLPADAKGYAVISVISEA
CCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEECCCCCCCEEEEEEECCC
DIQPIEAPAGMELHWVTEQPLADKVRELEWQQGEAAVWCACEFDSMRALRQYFRNEMDVD
CCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHCCCC
RENIYISSYWKQGVSEDGHKVIKREDAELNEQ
HHEEEEEHHHHCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]