Click here to switch to the map view.

The map label for this gene is 156978097

Identifier: 156978097

GI number: 156978097

Start: 2000218

End: 2000463

Strand: Direct

Name: 156978097

Synonym: VIBHAR_06901

Alternate gene names: NA

Gene position: 2000218-2000463 (Clockwise)

Preceding gene: 156978093

Following gene: 156978101

Centisome position: 90.75

GC content: 44.31

Gene sequence:

>246_bases
ATGGTGACCTGCAGCCAATACGATTTTATTGAAATCGCCTGTATGTTTAATCTGCCCGTACAGATCACCCTCAAAAACGG
TGAGAAACATCAAGGCAGCGCCTTTGATACAGGCTACGATATTGAACGACAAGAGTGCTTGTTTTTGGATATCGATGGCG
AGCACATTTCGTTCCCAACCGAACAATTGATTGCGATGAGAGCACTCAAAGACAATCCGCATTTCAGTGAAGTGACCTTC
GGTTAA

Upstream 100 bases:

>100_bases
TTTTTCATGACCAAAATAGGGCGTAAGATGAAGATTAGGTTTCAGAGAAGTATTTCTGTCCTTTATCGGTCTTGATAAGG
AAGAGAGAAGGAGAAAAGTT

Downstream 100 bases:

>100_bases
CTGCTCGAAAACCGATAGAAACGTCAGACATAAAAAAGCGCCCTTAACTGGCTGAGTTAAGTGCGCTTTTGTTTGGCGTT
AGAGGTTTACCTTGAGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Antiterminator; Modulator Of Rho-Dependent Transcription Termination

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MVTCSQYDFIEIACMFNLPVQITLKNGEKHQGSAFDTGYDIERQECLFLDIDGEHISFPTEQLIAMRALKDNPHFSEVTF
G

Sequences:

>Translated_81_residues
MVTCSQYDFIEIACMFNLPVQITLKNGEKHQGSAFDTGYDIERQECLFLDIDGEHISFPTEQLIAMRALKDNPHFSEVTF
G
>Mature_81_residues
MVTCSQYDFIEIACMFNLPVQITLKNGEKHQGSAFDTGYDIERQECLFLDIDGEHISFPTEQLIAMRALKDNPHFSEVTF
G

Specific function: Unknown

COG id: COG4568

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9247; Mature: 9247

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTCSQYDFIEIACMFNLPVQITLKNGEKHQGSAFDTGYDIERQECLFLDIDGEHISFPT
CCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCH
EQLIAMRALKDNPHFSEVTFG
HHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MVTCSQYDFIEIACMFNLPVQITLKNGEKHQGSAFDTGYDIERQECLFLDIDGEHISFPT
CCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCH
EQLIAMRALKDNPHFSEVTFG
HHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA