Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978086

Identifier: 156978086

GI number: 156978086

Start: 1990637

End: 1990945

Strand: Reverse

Name: 156978086

Synonym: VIBHAR_06890

Alternate gene names: NA

Gene position: 1990945-1990637 (Counterclockwise)

Preceding gene: 156978087

Following gene: 156978084

Centisome position: 90.33

GC content: 45.95

Gene sequence:

>309_bases
ATGATTTCTCTTCCGGCTAAAATCACTTTGACACTAGGTAGTTTGCTTGTAGTTGGAGGCTGTACTTCCAATGTGCCGGA
GTACCAATATCAGTGTGTTGACGGCCATCGGTTTGCTGCCCATTTTGAGCAGGAAAAAGCGCGGATTACCGTTGATGGCG
GAAGAGAGCTTGAGCTCAAACAAGTCCGCTCGGCTTCTGGTGTAAGGTATCTATCTGATGACCAAATGTTAGTGCTCCAC
ACCAAAGGTGACGAAGCGATTTTGATCGTCAATGAAATATCGCAGAGTACATGTCGCATTACGAAGTAA

Upstream 100 bases:

>100_bases
TGCCAACACGCGACCTTTACCGTTACAACAGCAAGCTACCTGTTGTGGTTTACGCACCAGCGGATTTGGACGTGAACATT
CGCGTTTGGGCGCCTGAAGA

Downstream 100 bases:

>100_bases
TCCGATCGCTCAAAGGCTTGGTTGATACCGAGCCTTTTTTATACTCAAAAGCTAAACGGATTGTATTCGGTGAGTGATTC
CAGTGAATATTGAGGACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MISLPAKITLTLGSLLVVGGCTSNVPEYQYQCVDGHRFAAHFEQEKARITVDGGRELELKQVRSASGVRYLSDDQMLVLH
TKGDEAILIVNEISQSTCRITK

Sequences:

>Translated_102_residues
MISLPAKITLTLGSLLVVGGCTSNVPEYQYQCVDGHRFAAHFEQEKARITVDGGRELELKQVRSASGVRYLSDDQMLVLH
TKGDEAILIVNEISQSTCRITK
>Mature_102_residues
MISLPAKITLTLGSLLVVGGCTSNVPEYQYQCVDGHRFAAHFEQEKARITVDGGRELELKQVRSASGVRYLSDDQMLVLH
TKGDEAILIVNEISQSTCRITK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11250; Mature: 11250

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLPAKITLTLGSLLVVGGCTSNVPEYQYQCVDGHRFAAHFEQEKARITVDGGRELELK
CCCCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCEEEHH
QVRSASGVRYLSDDQMLVLHTKGDEAILIVNEISQSTCRITK
HHCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCEEEECC
>Mature Secondary Structure
MISLPAKITLTLGSLLVVGGCTSNVPEYQYQCVDGHRFAAHFEQEKARITVDGGRELELK
CCCCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCEEEHH
QVRSASGVRYLSDDQMLVLHTKGDEAILIVNEISQSTCRITK
HHCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA