Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978067

Identifier: 156978067

GI number: 156978067

Start: 1979606

End: 1980142

Strand: Direct

Name: 156978067

Synonym: VIBHAR_06871

Alternate gene names: NA

Gene position: 1979606-1980142 (Clockwise)

Preceding gene: 156978066

Following gene: 156978068

Centisome position: 89.82

GC content: 47.11

Gene sequence:

>537_bases
ATGTACCAAGATATCCTGACTTTCTGGTTTGAAGAACTGGAACCAAAAGACTGGTTTGTGAGCAACGCCGACGTCGATAA
ACAAATCGAAACGCGCTTTCTCACCACCTTAGAGCAAGCCGCTCAATCTGAATTGTTTGACTGGCGAGAGACAGCGCAAG
GTCGACTCGCAGAGATCATTGTGCTCGACCAATTCTCTCGCAATGTTTACCGCAATACACCCAAAGCATTCGCTCAAGAT
GCCCTCGCGCTTGCCTTGGCACAAGAGGCAATTCGTTTAGGCTTAGACCAAGAATTGACGGACGTTGAACGCAGCTTCTT
GTACATGCCATTTATGCACAGTGAATCTAAGCGAATTCATGAAGAGGCAGAGAAGCTGTTCAAAGCTCTTGGGCGAGAAT
CTAATTACGAGTTCGAGCTAAAGCATAAAGTGATCATCGATCGCTTTGGTCGCTACCCACACCGCAATACGATTTTAGGC
CGTGATAGCACCGCAGAAGAAGTGGAATTCTTACAACAGCCGGGGTCCAGTTTTTAA

Upstream 100 bases:

>100_bases
TGAGCAGTTTGAGCACTACATCCAAAAGACTTACGGTCGATAAGCCAAACCAAGAGCTAGGGGTTATACTCCTAGCTCTT
TTTCTATCAGGGAAGCAACC

Downstream 100 bases:

>100_bases
GCAAGCACACCTGCCAACTGAAAACGAACTATTACACCAAGCATAAAGCCTTTTGCTCTCTTAAGGCTTTGTGTATCGTA
CTTGCCTTACGTAGCTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MYQDILTFWFEELEPKDWFVSNADVDKQIETRFLTTLEQAAQSELFDWRETAQGRLAEIIVLDQFSRNVYRNTPKAFAQD
ALALALAQEAIRLGLDQELTDVERSFLYMPFMHSESKRIHEEAEKLFKALGRESNYEFELKHKVIIDRFGRYPHRNTILG
RDSTAEEVEFLQQPGSSF

Sequences:

>Translated_178_residues
MYQDILTFWFEELEPKDWFVSNADVDKQIETRFLTTLEQAAQSELFDWRETAQGRLAEIIVLDQFSRNVYRNTPKAFAQD
ALALALAQEAIRLGLDQELTDVERSFLYMPFMHSESKRIHEEAEKLFKALGRESNYEFELKHKVIIDRFGRYPHRNTILG
RDSTAEEVEFLQQPGSSF
>Mature_178_residues
MYQDILTFWFEELEPKDWFVSNADVDKQIETRFLTTLEQAAQSELFDWRETAQGRLAEIIVLDQFSRNVYRNTPKAFAQD
ALALALAQEAIRLGLDQELTDVERSFLYMPFMHSESKRIHEEAEKLFKALGRESNYEFELKHKVIIDRFGRYPHRNTILG
RDSTAEEVEFLQQPGSSF

Specific function: Unknown

COG id: COG3803

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20946; Mature: 20946

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQDILTFWFEELEPKDWFVSNADVDKQIETRFLTTLEQAAQSELFDWRETAQGRLAEII
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLDQFSRNVYRNTPKAFAQDALALALAQEAIRLGLDQELTDVERSFLYMPFMHSESKRIH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCHHHHHH
EEAEKLFKALGRESNYEFELKHKVIIDRFGRYPHRNTILGRDSTAEEVEFLQQPGSSF
HHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MYQDILTFWFEELEPKDWFVSNADVDKQIETRFLTTLEQAAQSELFDWRETAQGRLAEII
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLDQFSRNVYRNTPKAFAQDALALALAQEAIRLGLDQELTDVERSFLYMPFMHSESKRIH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCHHHHHH
EEAEKLFKALGRESNYEFELKHKVIIDRFGRYPHRNTILGRDSTAEEVEFLQQPGSSF
HHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA