| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978056
Identifier: 156978056
GI number: 156978056
Start: 1969575
End: 1970366
Strand: Direct
Name: 156978056
Synonym: VIBHAR_06860
Alternate gene names: NA
Gene position: 1969575-1970366 (Clockwise)
Preceding gene: 156978055
Following gene: 156978057
Centisome position: 89.36
GC content: 36.74
Gene sequence:
>792_bases ATGGTATCCGTAAAATTTTTCCAATTTTTCAGGTATTTAGATATGAACGTTGAAGAAAGAAACATGGAAGAAGCATGCAA GAAATTTAAAAGCCACCTTGGCTTCAATAATAGAAACGTGATTCACGTTGCATTTTCAAGAATAGATACTGTTCAAAATA AACTATTAACAATCTGTACAGACTACAGCTGGCACTTAGAATATTGGTCAGAAGATATGTATAAATCCGTTGGGAAACGG TGTGGAGAGGGTGTAAATGTCTGGGATAAGATAGATGAAGATCATAAGCAAATACTCAAAAAGATACATGCTGAACAAAA AGTGGATGTTACCACAAAGAACGAAGAATATATCGATATACTTTCATTGGCTTCCAATCAACCACTCAGCGCTCGTTCTA TTTTGAACCTTTCTTCACTAAAACCGAAAATAGGCTTTTTAGCTCAAAACATATGGCATATGGAAAAACCAAGCTGCCTT AATATCCCCACACCTGAACTCTCTCCGGCCAGTGATGAAGCGTTAATTAACATCGATATTTCTCAATACTCGTTTGGTGG CCTAACTTTCTCAGAAAAAGAAATGCAAACGATTCAATGGCTCTTACAGCTGAAATCAATAAAAGAAATCGCTTGGACTC ATCGATGTAGCGAGACAGCAGAAAGAAAAAGAATTGAATCTATCAAAAGAAAGCTTAATTGCTCTGGAAAATCATCTTCA TACCTCTTTAATGCGCTCAAGAGATCGGGGATCGCTCAAGCATGTCTATCCAACTACACCATGTCTCAATAA
Upstream 100 bases:
>100_bases ATATAGTTTATTAATCGATGTAACAGTGGTATACATTATCCATTAATCTCATATTTATTGTCAGGTTACTAATTTTAGAA CCTGACAAATACATAAAAAT
Downstream 100 bases:
>100_bases CATGTCAAAATCTCGAACAATGTTGCCGTTTCTACGAAAAAATCGGCTTTGATAAATACCGCTCTTATCAGGATGATGGC GTCACTATCTTATTGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICTDYSWHLEYWSEDMYKSVGKR CGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDILSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCL NIPTPELSPASDEALINIDISQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS YLFNALKRSGIAQACLSNYTMSQ
Sequences:
>Translated_263_residues MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICTDYSWHLEYWSEDMYKSVGKR CGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDILSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCL NIPTPELSPASDEALINIDISQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS YLFNALKRSGIAQACLSNYTMSQ >Mature_263_residues MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICTDYSWHLEYWSEDMYKSVGKR CGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDILSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCL NIPTPELSPASDEALINIDISQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS YLFNALKRSGIAQACLSNYTMSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30419; Mature: 30419
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICT CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHC DYSWHLEYWSEDMYKSVGKRCGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDI CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHH LSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCLNIPTPELSPASDEALINIDI HHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE SQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH YLFNALKRSGIAQACLSNYTMSQ HHHHHHHHCCHHHHHHHCCCCCC >Mature Secondary Structure MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICT CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHC DYSWHLEYWSEDMYKSVGKRCGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDI CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHH LSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCLNIPTPELSPASDEALINIDI HHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE SQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH YLFNALKRSGIAQACLSNYTMSQ HHHHHHHHCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA