Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978056

Identifier: 156978056

GI number: 156978056

Start: 1969575

End: 1970366

Strand: Direct

Name: 156978056

Synonym: VIBHAR_06860

Alternate gene names: NA

Gene position: 1969575-1970366 (Clockwise)

Preceding gene: 156978055

Following gene: 156978057

Centisome position: 89.36

GC content: 36.74

Gene sequence:

>792_bases
ATGGTATCCGTAAAATTTTTCCAATTTTTCAGGTATTTAGATATGAACGTTGAAGAAAGAAACATGGAAGAAGCATGCAA
GAAATTTAAAAGCCACCTTGGCTTCAATAATAGAAACGTGATTCACGTTGCATTTTCAAGAATAGATACTGTTCAAAATA
AACTATTAACAATCTGTACAGACTACAGCTGGCACTTAGAATATTGGTCAGAAGATATGTATAAATCCGTTGGGAAACGG
TGTGGAGAGGGTGTAAATGTCTGGGATAAGATAGATGAAGATCATAAGCAAATACTCAAAAAGATACATGCTGAACAAAA
AGTGGATGTTACCACAAAGAACGAAGAATATATCGATATACTTTCATTGGCTTCCAATCAACCACTCAGCGCTCGTTCTA
TTTTGAACCTTTCTTCACTAAAACCGAAAATAGGCTTTTTAGCTCAAAACATATGGCATATGGAAAAACCAAGCTGCCTT
AATATCCCCACACCTGAACTCTCTCCGGCCAGTGATGAAGCGTTAATTAACATCGATATTTCTCAATACTCGTTTGGTGG
CCTAACTTTCTCAGAAAAAGAAATGCAAACGATTCAATGGCTCTTACAGCTGAAATCAATAAAAGAAATCGCTTGGACTC
ATCGATGTAGCGAGACAGCAGAAAGAAAAAGAATTGAATCTATCAAAAGAAAGCTTAATTGCTCTGGAAAATCATCTTCA
TACCTCTTTAATGCGCTCAAGAGATCGGGGATCGCTCAAGCATGTCTATCCAACTACACCATGTCTCAATAA

Upstream 100 bases:

>100_bases
ATATAGTTTATTAATCGATGTAACAGTGGTATACATTATCCATTAATCTCATATTTATTGTCAGGTTACTAATTTTAGAA
CCTGACAAATACATAAAAAT

Downstream 100 bases:

>100_bases
CATGTCAAAATCTCGAACAATGTTGCCGTTTCTACGAAAAAATCGGCTTTGATAAATACCGCTCTTATCAGGATGATGGC
GTCACTATCTTATTGATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICTDYSWHLEYWSEDMYKSVGKR
CGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDILSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCL
NIPTPELSPASDEALINIDISQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS
YLFNALKRSGIAQACLSNYTMSQ

Sequences:

>Translated_263_residues
MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICTDYSWHLEYWSEDMYKSVGKR
CGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDILSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCL
NIPTPELSPASDEALINIDISQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS
YLFNALKRSGIAQACLSNYTMSQ
>Mature_263_residues
MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICTDYSWHLEYWSEDMYKSVGKR
CGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDILSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCL
NIPTPELSPASDEALINIDISQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS
YLFNALKRSGIAQACLSNYTMSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30419; Mature: 30419

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICT
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHC
DYSWHLEYWSEDMYKSVGKRCGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDI
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHH
LSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCLNIPTPELSPASDEALINIDI
HHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE
SQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
YLFNALKRSGIAQACLSNYTMSQ
HHHHHHHHCCHHHHHHHCCCCCC
>Mature Secondary Structure
MVSVKFFQFFRYLDMNVEERNMEEACKKFKSHLGFNNRNVIHVAFSRIDTVQNKLLTICT
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHC
DYSWHLEYWSEDMYKSVGKRCGEGVNVWDKIDEDHKQILKKIHAEQKVDVTTKNEEYIDI
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHH
LSLASNQPLSARSILNLSSLKPKIGFLAQNIWHMEKPSCLNIPTPELSPASDEALINIDI
HHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE
SQYSFGGLTFSEKEMQTIQWLLQLKSIKEIAWTHRCSETAERKRIESIKRKLNCSGKSSS
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
YLFNALKRSGIAQACLSNYTMSQ
HHHHHHHHCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA