Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978047

Identifier: 156978047

GI number: 156978047

Start: 1962301

End: 1962771

Strand: Direct

Name: 156978047

Synonym: VIBHAR_06851

Alternate gene names: NA

Gene position: 1962301-1962771 (Clockwise)

Preceding gene: 156978046

Following gene: 156978048

Centisome position: 89.03

GC content: 45.65

Gene sequence:

>471_bases
ATGATTTATCTTTTCGATTGGGGAAACACCTTGATGGTCGATTTTCCTCACGCACAAGGAAAAATGTGCGATTGGGAACA
CGTTGAAACCGTTCCTCAAGCCAAAGAGACTCTGGCTCAACTCACACAAGGTCACCAAGTTTATATCGCGACCAGCGCAT
CAGATTCAGCGATGGAAGATGTGCAAAAAGCCTTTCAACGAGTCGGGCTCGACCAATACCTTTCTGGCTACTTTTGCTTT
GCCAACCTTGGTATTGCCAAGAATCAGCCTGATTTTTATCTCACGGTCGCAAAACAATTGAGCGTTGAGCCGGGTCAACT
CACCATGGTTGGCGACTTACCAGAAAAAGACATTTACCCAGCAATGGACGCAGGGTTAAACGTCATTTGGTTCAATCCTC
AAGACCTCCCAACACCAAGCAAATCCATACCAAATCAAATACGTTGTTTGTCCGAGTTGATAAGCACCTGA

Upstream 100 bases:

>100_bases
GAATTTCAGCATTAAAGCTTACGTGAATCGCATTTATCTTTCACGCTTTCCTTCCCTTTTCGAAAAGACGATATGATGTA
CGAATAAAGGAGATTCGAAC

Downstream 100 bases:

>100_bases
CCGACATACGCACAAATACACTTGATCCACTAAACTTTATGCACCAATCAAGGAAGATGAATGCAAATCAGACCGATTAC
CGTCAACGACATTGACCACT

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase; HAD Superfamily Hydrolase-Like

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIYLFDWGNTLMVDFPHAQGKMCDWEHVETVPQAKETLAQLTQGHQVYIATSASDSAMEDVQKAFQRVGLDQYLSGYFCF
ANLGIAKNQPDFYLTVAKQLSVEPGQLTMVGDLPEKDIYPAMDAGLNVIWFNPQDLPTPSKSIPNQIRCLSELIST

Sequences:

>Translated_156_residues
MIYLFDWGNTLMVDFPHAQGKMCDWEHVETVPQAKETLAQLTQGHQVYIATSASDSAMEDVQKAFQRVGLDQYLSGYFCF
ANLGIAKNQPDFYLTVAKQLSVEPGQLTMVGDLPEKDIYPAMDAGLNVIWFNPQDLPTPSKSIPNQIRCLSELIST
>Mature_156_residues
MIYLFDWGNTLMVDFPHAQGKMCDWEHVETVPQAKETLAQLTQGHQVYIATSASDSAMEDVQKAFQRVGLDQYLSGYFCF
ANLGIAKNQPDFYLTVAKQLSVEPGQLTMVGDLPEKDIYPAMDAGLNVIWFNPQDLPTPSKSIPNQIRCLSELIST

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17449; Mature: 17449

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYLFDWGNTLMVDFPHAQGKMCDWEHVETVPQAKETLAQLTQGHQVYIATSASDSAMED
CEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH
VQKAFQRVGLDQYLSGYFCFANLGIAKNQPDFYLTVAKQLSVEPGQLTMVGDLPEKDIYP
HHHHHHHCCHHHHHHHEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCC
AMDAGLNVIWFNPQDLPTPSKSIPNQIRCLSELIST
HHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIYLFDWGNTLMVDFPHAQGKMCDWEHVETVPQAKETLAQLTQGHQVYIATSASDSAMED
CEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH
VQKAFQRVGLDQYLSGYFCFANLGIAKNQPDFYLTVAKQLSVEPGQLTMVGDLPEKDIYP
HHHHHHHCCHHHHHHHEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCC
AMDAGLNVIWFNPQDLPTPSKSIPNQIRCLSELIST
HHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA