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The map label for this gene is tldD [C]

Identifier: 156978033

GI number: 156978033

Start: 1948023

End: 1949447

Strand: Reverse

Name: tldD [C]

Synonym: VIBHAR_06837

Alternate gene names: 156978033

Gene position: 1949447-1948023 (Counterclockwise)

Preceding gene: 156978042

Following gene: 156978032

Centisome position: 88.45

GC content: 49.68

Gene sequence:

>1425_bases
GTGGGGAAGGCTAGGACGAGCAACGAGCAAGGAGATTTCATGCTTAATTCTGTAACGGCGAAAGCGGTGATCGATCATGC
CCTCTTTTTAGGGGCTGATTTCGCTGAGCTATTCGTTGAACACCATCAAACCAACACTGTCCAGATCGCATCTGGTGAGG
TGGACAAGGTTAACTCGGGTATCGATTTTGGTATCGGTATTCGTCTCTTCTTCGGTCATAAAGTGCTTTACGGTTACACC
AACAGCACAGATGAAGCCGAACTAAAACGCGTAACCTCACTGCTTGCAGCAAAAGACAAGCGTGAGCAAATCGCCTCAGC
AGGTTCTCTCAATCTGAACCGCTACCCAATTCAACATGGTTGTCGTATGCCACTTGGCAAAGACGCGAACCTAGATTCTA
AAATTGCTTTCCTATTGCAAGTTGACCAAGCCGCACGCGCAGAGAGTGAACATATCAGCCAGTTCATTGGCAGTGTGCTT
CAGCGTGAACAACAAGTGTCTATCTTCAACTCTGAAGGTCTACACGTTGACGATACTCGTCACTACATCCGAGTTGCTGG
GAATACTGTCGCGCAAAAAGGTAATGAGCAGTCTTCTGGTATGGAAGGTCCGGGCGCTCTCGCTGGTTGGGAGTTCAGTG
AACAACTTGATGCGAAAGAGCTAGGTCAAACTATCGCGCAGCAAGCGTTAGTAAAACTTGGTGCGGATGCGTGCCCATCG
GGTGAAATGCCGGTGGTAATTGGCAATGGTTTTGGCGGCGTAATCTTCCACGAAGCTTGTGGCCACTTACTAGAAACTAC
TTCGGTTGCGAAGAAAGCGTCCGTATTCCACGACAAGATGGGCGAAATGATTGCTCACACCGCAGTGAATGCTGTCGATG
ATGGCACCATGACCAACGAATGGGGTTCGATTCATGTTGATGATGAAGGCATGAAGACTCAGCGCACTCAGTTGATCAAA
GACGGTAAGCTAACCAGCTTTATGGTCGATAAAATGGGTGGCATGAAGACGGGTTACGAACCTACGGGATCTGGTCGTCG
TCAAAACTACAAGTTCGCACCAACCTCACGCATGCGTAACACCTTTATCGAAGAAGGCGAGCATTCACTTGATGACATGC
TGGCAGGTATCGAACGCGGCATCTATGCGAAGAAGATGGGCGGCGGCTCGGTTCAACCGGGCACGGGCGAGTTCAACTTT
GCTGTTCGTGAAGCTTACCTCATTGAAAATGGCAAAATAACCAAGCCTCTGAAAACGGCAACGCTGATCAGCACGGGTCC
GAAAGTGCTGAAAGAAATTAGCATGGTCGGCAAAGACATGGCGCTTGCGCCGGGCATGTGTGGTTCCGTGAGTGGTTCAG
TGCCAACAACAGTCGGTCAGCCAACGCTGAAAGTCGATAACATTCTGGTAGGAGGCGGTAACTAA

Upstream 100 bases:

>100_bases
AAACAAGGTTAAGAAAGTGTTAATATTTAACGCGTTGCCAATATGCTTTTGAGTCATCCAATTTAGGTTACGACTGTTAT
AAACAGAGTCTAACTCAAAG

Downstream 100 bases:

>100_bases
TGAGCCAAGAAAAACAACTTCTTAATGCGGTTGATTACGTCCTATCAGAAGCGAAGCGCCAAGGCGCAGAAGCGGACGTC
ATTGTAAACCGCAACAGCAG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MGKARTSNEQGDFMLNSVTAKAVIDHALFLGADFAELFVEHHQTNTVQIASGEVDKVNSGIDFGIGIRLFFGHKVLYGYT
NSTDEAELKRVTSLLAAKDKREQIASAGSLNLNRYPIQHGCRMPLGKDANLDSKIAFLLQVDQAARAESEHISQFIGSVL
QREQQVSIFNSEGLHVDDTRHYIRVAGNTVAQKGNEQSSGMEGPGALAGWEFSEQLDAKELGQTIAQQALVKLGADACPS
GEMPVVIGNGFGGVIFHEACGHLLETTSVAKKASVFHDKMGEMIAHTAVNAVDDGTMTNEWGSIHVDDEGMKTQRTQLIK
DGKLTSFMVDKMGGMKTGYEPTGSGRRQNYKFAPTSRMRNTFIEEGEHSLDDMLAGIERGIYAKKMGGGSVQPGTGEFNF
AVREAYLIENGKITKPLKTATLISTGPKVLKEISMVGKDMALAPGMCGSVSGSVPTTVGQPTLKVDNILVGGGN

Sequences:

>Translated_474_residues
MGKARTSNEQGDFMLNSVTAKAVIDHALFLGADFAELFVEHHQTNTVQIASGEVDKVNSGIDFGIGIRLFFGHKVLYGYT
NSTDEAELKRVTSLLAAKDKREQIASAGSLNLNRYPIQHGCRMPLGKDANLDSKIAFLLQVDQAARAESEHISQFIGSVL
QREQQVSIFNSEGLHVDDTRHYIRVAGNTVAQKGNEQSSGMEGPGALAGWEFSEQLDAKELGQTIAQQALVKLGADACPS
GEMPVVIGNGFGGVIFHEACGHLLETTSVAKKASVFHDKMGEMIAHTAVNAVDDGTMTNEWGSIHVDDEGMKTQRTQLIK
DGKLTSFMVDKMGGMKTGYEPTGSGRRQNYKFAPTSRMRNTFIEEGEHSLDDMLAGIERGIYAKKMGGGSVQPGTGEFNF
AVREAYLIENGKITKPLKTATLISTGPKVLKEISMVGKDMALAPGMCGSVSGSVPTTVGQPTLKVDNILVGGGN
>Mature_473_residues
GKARTSNEQGDFMLNSVTAKAVIDHALFLGADFAELFVEHHQTNTVQIASGEVDKVNSGIDFGIGIRLFFGHKVLYGYTN
STDEAELKRVTSLLAAKDKREQIASAGSLNLNRYPIQHGCRMPLGKDANLDSKIAFLLQVDQAARAESEHISQFIGSVLQ
REQQVSIFNSEGLHVDDTRHYIRVAGNTVAQKGNEQSSGMEGPGALAGWEFSEQLDAKELGQTIAQQALVKLGADACPSG
EMPVVIGNGFGGVIFHEACGHLLETTSVAKKASVFHDKMGEMIAHTAVNAVDDGTMTNEWGSIHVDDEGMKTQRTQLIKD
GKLTSFMVDKMGGMKTGYEPTGSGRRQNYKFAPTSRMRNTFIEEGEHSLDDMLAGIERGIYAKKMGGGSVQPGTGEFNFA
VREAYLIENGKITKPLKTATLISTGPKVLKEISMVGKDMALAPGMCGSVSGSVPTTVGQPTLKVDNILVGGGN

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=452, Percent_Identity=33.8495575221239, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI1790682, Length=444, Percent_Identity=23.8738738738739, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 50875; Mature: 50744

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKARTSNEQGDFMLNSVTAKAVIDHALFLGADFAELFVEHHQTNTVQIASGEVDKVNSG
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCHHHCCCC
IDFGIGIRLFFGHKVLYGYTNSTDEAELKRVTSLLAAKDKREQIASAGSLNLNRYPIQHG
CCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCC
CRMPLGKDANLDSKIAFLLQVDQAARAESEHISQFIGSVLQREQQVSIFNSEGLHVDDTR
CCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCC
HYIRVAGNTVAQKGNEQSSGMEGPGALAGWEFSEQLDAKELGQTIAQQALVKLGADACPS
CEEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
GEMPVVIGNGFGGVIFHEACGHLLETTSVAKKASVFHDKMGEMIAHTAVNAVDDGTMTNE
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
WGSIHVDDEGMKTQRTQLIKDGKLTSFMVDKMGGMKTGYEPTGSGRRQNYKFAPTSRMRN
CCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
TFIEEGEHSLDDMLAGIERGIYAKKMGGGSVQPGTGEFNFAVREAYLIENGKITKPLKTA
HHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHH
TLISTGPKVLKEISMVGKDMALAPGMCGSVSGSVPTTVGQPTLKVDNILVGGGN
HHHCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCEEECEEEEECCC
>Mature Secondary Structure 
GKARTSNEQGDFMLNSVTAKAVIDHALFLGADFAELFVEHHQTNTVQIASGEVDKVNSG
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCHHHCCCC
IDFGIGIRLFFGHKVLYGYTNSTDEAELKRVTSLLAAKDKREQIASAGSLNLNRYPIQHG
CCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCC
CRMPLGKDANLDSKIAFLLQVDQAARAESEHISQFIGSVLQREQQVSIFNSEGLHVDDTR
CCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCC
HYIRVAGNTVAQKGNEQSSGMEGPGALAGWEFSEQLDAKELGQTIAQQALVKLGADACPS
CEEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
GEMPVVIGNGFGGVIFHEACGHLLETTSVAKKASVFHDKMGEMIAHTAVNAVDDGTMTNE
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
WGSIHVDDEGMKTQRTQLIKDGKLTSFMVDKMGGMKTGYEPTGSGRRQNYKFAPTSRMRN
CCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
TFIEEGEHSLDDMLAGIERGIYAKKMGGGSVQPGTGEFNFAVREAYLIENGKITKPLKTA
HHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHH
TLISTGPKVLKEISMVGKDMALAPGMCGSVSGSVPTTVGQPTLKVDNILVGGGN
HHHCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCEEECEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]