| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977978
Identifier: 156977978
GI number: 156977978
Start: 1902438
End: 1903514
Strand: Direct
Name: 156977978
Synonym: VIBHAR_06774
Alternate gene names: NA
Gene position: 1902438-1903514 (Clockwise)
Preceding gene: 156977977
Following gene: 156977979
Centisome position: 86.32
GC content: 38.81
Gene sequence:
>1077_bases ATGTCAATATCAACCGAATCAATTGATCGCAGAAAGGCAAGAGAAAAAAAATTAAAAAAATTCCGAAAAAGACTCTTTTC TAGGCGGCGTCATTTGAAATTTTTCGAATCGCTGGGGCAACATGTAGAGGATATCGCAATAGAGATATCTCGTTGCAGAA AACCGACGAGATCAATTCTTTTTTTATCCCAATCATCATTCAAAGCCGAGTTAGAGAAAATTTTTGGTAGGCCTATTGAG CAATGTTCTTCCATAGAAAGAAGGCAATTGATTGATTATGCGATCACGCTGTCTTATACCGCTGGTATGTCATTCACGAA AATCGCTCAGATACAAAATGATATTCTCAAAAAGGGGTCAAAGCAATCCGTGCTGCAACGTTACCAAGCTTTCACTAGCG AGCTTTTCAACGACGATTTTACGTCCCCAGATTTTGCAAAATTAATCATGGACACCCGATGTTCAGCCAAGGAGTCGATT CATGTACTCACTGGTTGGAGTGGGAATTTAGTACAGCATTTTTATACTGCATTACATCTCTGTAATGTACACGTTTCAGA TATAGAAAAACGCATTAGGGGGAAGATCGCGGCATCCAAGAGCGATTACAGTCTAGACCACACCCAATACATAATTCACC TGATTGTCTACCTATTGATGCAACGCCTGCACCCTTCCAATTTTGATAAATTGACGCCTGAACTGCGTCAGCTAGTCGAG ATTGATTATCAACACATATCAGAAAATCAACATTTAGCAGATTGCTACTGCATTGGTTATAGAAGAGGTTATTCATATGA CAAAAAAATGGAAAACCTTGAAACAGTTGCCCTAGGTCGCCTAAATCACCGACAAAAATATTTTTTTACCGGTGTCGCGT TCATACCCAGCAAATTGAATTCTGCCGTAAAAACAGATGGTCAAAACACTAGTGTCATTCAATTTCATGATCAACTAATT AGAAACCGTATTGCGATTGCAGAACTTCTGGAACGTGAGGATAAGAACCAACGGCAAAATCTATATGCGGTTATTGATGT ACTGCTCACGCATTACACATTTATTGAAAATGATTAA
Upstream 100 bases:
>100_bases GATCATTACAACATTTTGGACTATCGTCAAAAAGCCTCTCAGAAGGGAGGAGGAACATTTTTTTCACCTCATTACATAAT TAATCGAAATGAGGTGAAAT
Downstream 100 bases:
>100_bases GTGAGAACGTGCTGGCGTAACCAAGACTGGCACATTCTTGGACAAAAGTTACTTAGAGTAATTACTTAAATTAAGGAAAT ACAGATAACGTCAGGTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSISTESIDRRKAREKKLKKFRKRLFSRRRHLKFFESLGQHVEDIAIEISRCRKPTRSILFLSQSSFKAELEKIFGRPIE QCSSIERRQLIDYAITLSYTAGMSFTKIAQIQNDILKKGSKQSVLQRYQAFTSELFNDDFTSPDFAKLIMDTRCSAKESI HVLTGWSGNLVQHFYTALHLCNVHVSDIEKRIRGKIAASKSDYSLDHTQYIIHLIVYLLMQRLHPSNFDKLTPELRQLVE IDYQHISENQHLADCYCIGYRRGYSYDKKMENLETVALGRLNHRQKYFFTGVAFIPSKLNSAVKTDGQNTSVIQFHDQLI RNRIAIAELLEREDKNQRQNLYAVIDVLLTHYTFIEND
Sequences:
>Translated_358_residues MSISTESIDRRKAREKKLKKFRKRLFSRRRHLKFFESLGQHVEDIAIEISRCRKPTRSILFLSQSSFKAELEKIFGRPIE QCSSIERRQLIDYAITLSYTAGMSFTKIAQIQNDILKKGSKQSVLQRYQAFTSELFNDDFTSPDFAKLIMDTRCSAKESI HVLTGWSGNLVQHFYTALHLCNVHVSDIEKRIRGKIAASKSDYSLDHTQYIIHLIVYLLMQRLHPSNFDKLTPELRQLVE IDYQHISENQHLADCYCIGYRRGYSYDKKMENLETVALGRLNHRQKYFFTGVAFIPSKLNSAVKTDGQNTSVIQFHDQLI RNRIAIAELLEREDKNQRQNLYAVIDVLLTHYTFIEND >Mature_357_residues SISTESIDRRKAREKKLKKFRKRLFSRRRHLKFFESLGQHVEDIAIEISRCRKPTRSILFLSQSSFKAELEKIFGRPIEQ CSSIERRQLIDYAITLSYTAGMSFTKIAQIQNDILKKGSKQSVLQRYQAFTSELFNDDFTSPDFAKLIMDTRCSAKESIH VLTGWSGNLVQHFYTALHLCNVHVSDIEKRIRGKIAASKSDYSLDHTQYIIHLIVYLLMQRLHPSNFDKLTPELRQLVEI DYQHISENQHLADCYCIGYRRGYSYDKKMENLETVALGRLNHRQKYFFTGVAFIPSKLNSAVKTDGQNTSVIQFHDQLIR NRIAIAELLEREDKNQRQNLYAVIDVLLTHYTFIEND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41871; Mature: 41739
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISTESIDRRKAREKKLKKFRKRLFSRRRHLKFFESLGQHVEDIAIEISRCRKPTRSIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE FLSQSSFKAELEKIFGRPIEQCSSIERRQLIDYAITLSYTAGMSFTKIAQIQNDILKKGS EECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC KQSVLQRYQAFTSELFNDDFTSPDFAKLIMDTRCSAKESIHVLTGWSGNLVQHFYTALHL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH CNVHVSDIEKRIRGKIAASKSDYSLDHTQYIIHLIVYLLMQRLHPSNFDKLTPELRQLVE HHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHH IDYQHISENQHLADCYCIGYRRGYSYDKKMENLETVALGRLNHRQKYFFTGVAFIPSKLN HHHHHHCCCCCHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SAVKTDGQNTSVIQFHDQLIRNRIAIAELLEREDKNQRQNLYAVIDVLLTHYTFIEND HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SISTESIDRRKAREKKLKKFRKRLFSRRRHLKFFESLGQHVEDIAIEISRCRKPTRSIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE FLSQSSFKAELEKIFGRPIEQCSSIERRQLIDYAITLSYTAGMSFTKIAQIQNDILKKGS EECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC KQSVLQRYQAFTSELFNDDFTSPDFAKLIMDTRCSAKESIHVLTGWSGNLVQHFYTALHL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH CNVHVSDIEKRIRGKIAASKSDYSLDHTQYIIHLIVYLLMQRLHPSNFDKLTPELRQLVE HHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHH IDYQHISENQHLADCYCIGYRRGYSYDKKMENLETVALGRLNHRQKYFFTGVAFIPSKLN HHHHHHCCCCCHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SAVKTDGQNTSVIQFHDQLIRNRIAIAELLEREDKNQRQNLYAVIDVLLTHYTFIEND HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA