Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is yggL [C]

Identifier: 156977931

GI number: 156977931

Start: 1861900

End: 1862238

Strand: Direct

Name: yggL [C]

Synonym: VIBHAR_06726

Alternate gene names: 156977931

Gene position: 1861900-1862238 (Clockwise)

Preceding gene: 156977929

Following gene: 156977933

Centisome position: 84.48

GC content: 43.95

Gene sequence:

>339_bases
ATGAAACTAGATAAAATCGATAACAAAAATCGTCGTCTACGCAAAAAGCTATTCCTAGGTGAATTCGCAATCCTAGGTTT
TGAAATCAGCTGTGAAACAGACATCAACGACTTCGACCGTTACGATGCATTCGTTGATGAGTTTATCGACTATATTGATG
GTCTAAACCTATGCTTTGGCGGCGGTGGTCTAGAGCTGTTTGAAGGCTTCCTATGTTCAACAGAGCGTTACGAAAGCGCA
ACTGAAGAACAGAAAGCGCAAGTTTTGGCTTGGCTACAAGCTCGCCCAGAAGTAAGCAGCGCAAAAGCTGGCGACTTGGT
TGACGCAAACTACCTGTAA

Upstream 100 bases:

>100_bases
GTTATAAAGCACCCATCTATTCTATGTACTCCCGATTTTGCTTGGGCAAAGCCTGTTTTGGGGGTATAAGGTGTACTCAA
ATCATCCACGAGAGATAATC

Downstream 100 bases:

>100_bases
TTGCGGAATCACTCTGTAACACAGGGTTGAGCAAGTAATAGAGAAAGCTGGTCTTCGGACTGGCTTTTTTGCATTTAAGG
CGATGGTTTTGTGCTGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKLDKIDNKNRRLRKKLFLGEFAILGFEISCETDINDFDRYDAFVDEFIDYIDGLNLCFGGGGLELFEGFLCSTERYESA
TEEQKAQVLAWLQARPEVSSAKAGDLVDANYL

Sequences:

>Translated_112_residues
MKLDKIDNKNRRLRKKLFLGEFAILGFEISCETDINDFDRYDAFVDEFIDYIDGLNLCFGGGGLELFEGFLCSTERYESA
TEEQKAQVLAWLQARPEVSSAKAGDLVDANYL
>Mature_112_residues
MKLDKIDNKNRRLRKKLFLGEFAILGFEISCETDINDFDRYDAFVDEFIDYIDGLNLCFGGGGLELFEGFLCSTERYESA
TEEQKAQVLAWLQARPEVSSAKAGDLVDANYL

Specific function: Unknown

COG id: COG3171

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12746; Mature: 12746

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDKIDNKNRRLRKKLFLGEFAILGFEISCETDINDFDRYDAFVDEFIDYIDGLNLCFG
CCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEC
GGGLELFEGFLCSTERYESATEEQKAQVLAWLQARPEVSSAKAGDLVDANYL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLDKIDNKNRRLRKKLFLGEFAILGFEISCETDINDFDRYDAFVDEFIDYIDGLNLCFG
CCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEC
GGGLELFEGFLCSTERYESATEEQKAQVLAWLQARPEVSSAKAGDLVDANYL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA