| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977883
Identifier: 156977883
GI number: 156977883
Start: 1813021
End: 1814145
Strand: Direct
Name: 156977883
Synonym: VIBHAR_06675
Alternate gene names: NA
Gene position: 1813021-1814145 (Clockwise)
Preceding gene: 156977882
Following gene: 156977884
Centisome position: 82.26
GC content: 49.96
Gene sequence:
>1125_bases ATGAAAGCCTCTTATACCTCGATGGTCGCGACCCTGCTTTTGGCACCTAGCAGTTTTGCGATGCAGCAAGACGACAGTAG CCTGGTGGATGACATCCTAACCAAACTGGGCTCTAGCGAAACCGTGGATGAGTCGAAATTGATCGACTGGGGCATCTTAC CGGGACCATTCGTCAATCCAGAGCAAGGATTTGGCATCGGCGTTGCCGCGGTGGGCTTGTATACCCCTTATGACTGGCAG AAAGGCGACCCGTACTCAACCGTCACCGTCACATCTTACGGTTCAACTTCTGGCTCTTACGGCTTGGGGTTAAACAACCG CACCTATTTGAAGGGTGACAAAGTACGTCTACTTGGTGAAGCGTGGATCAGCCATACTCCCGGATACTATTGGGGTATCG GCAGCCAAGCTGCTGAAAACGATAGTAATAAAGTGCAATACGAAGGCCAACGGTTACAGCTGAGCCCAAAAGTCGCCGTA GAAGTCGCCCCAAATACATACGCCAAGCTGGGCTGGCAATGGCAGTCATTCAGCAAAGTTGACGGCGTGGATGGCGATAT TCTTCCTTCAGAAGTTGCCAACGCCACCAGCAGTGGTGTCTTAGTTGGGATGGAATATGATACGCGTGATTTCGAACCAA ACCCCATGCGTGGGCAGTTTCTCGATATTGAATGGATAGCCAACCGCGATTCACTCGGTAGCGATGAAGATTACGACAAC CTAGTTGCCAACTATCGCCTTTATCAACAATGGTCTGACACGACGATTGTTGCAATGGAGGTATATTCACAATCGATTTT CGGTGACGCCCCTTGGTTTGATTACGCCCAGCTGGGTGATGACCAACGCATGCGTGGTTACTACCAAGGTCAATATCGCG ATAAACATCAGCTTTCAACGCAAGTCGAGATTCGCCGTACCATTGCTGGCCGCCATGGTGTGGTTGGTTGGCTAGGCGCT GGCAATATCGCACCAACTTATCACGACTTATTTGAAAGTAGCTGGCTACCGACTGTCGGAGTTGGCTATCGATTTGCCTT TAAGGCACGTATTAACGTGCGCGTCGATTTAGGCGTAGGCAAAGACAGTACCGGTTTCTATTTCCAAATTAATGAAGCAT TCTAG
Upstream 100 bases:
>100_bases TCAAATCAATGAAGATTGGTATCTTTTGGGCGAAGCGGGCTTTGGTGATCGCGAAAGCATCTTCTTCTCTTTAGACCGCC GTTTCTAAGGCAAAGATAAG
Downstream 100 bases:
>100_bases GAGTAGGGTTTGAAGAAAGCAGCACTATTACTACTAAGCCTTTGTAGTGGGTTTGTCCAAGCACAAGAATTGAAAGCACC AGTGGGTGTCAGGCCGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKASYTSMVATLLLAPSSFAMQQDDSSLVDDILTKLGSSETVDESKLIDWGILPGPFVNPEQGFGIGVAAVGLYTPYDWQ KGDPYSTVTVTSYGSTSGSYGLGLNNRTYLKGDKVRLLGEAWISHTPGYYWGIGSQAAENDSNKVQYEGQRLQLSPKVAV EVAPNTYAKLGWQWQSFSKVDGVDGDILPSEVANATSSGVLVGMEYDTRDFEPNPMRGQFLDIEWIANRDSLGSDEDYDN LVANYRLYQQWSDTTIVAMEVYSQSIFGDAPWFDYAQLGDDQRMRGYYQGQYRDKHQLSTQVEIRRTIAGRHGVVGWLGA GNIAPTYHDLFESSWLPTVGVGYRFAFKARINVRVDLGVGKDSTGFYFQINEAF
Sequences:
>Translated_374_residues MKASYTSMVATLLLAPSSFAMQQDDSSLVDDILTKLGSSETVDESKLIDWGILPGPFVNPEQGFGIGVAAVGLYTPYDWQ KGDPYSTVTVTSYGSTSGSYGLGLNNRTYLKGDKVRLLGEAWISHTPGYYWGIGSQAAENDSNKVQYEGQRLQLSPKVAV EVAPNTYAKLGWQWQSFSKVDGVDGDILPSEVANATSSGVLVGMEYDTRDFEPNPMRGQFLDIEWIANRDSLGSDEDYDN LVANYRLYQQWSDTTIVAMEVYSQSIFGDAPWFDYAQLGDDQRMRGYYQGQYRDKHQLSTQVEIRRTIAGRHGVVGWLGA GNIAPTYHDLFESSWLPTVGVGYRFAFKARINVRVDLGVGKDSTGFYFQINEAF >Mature_374_residues MKASYTSMVATLLLAPSSFAMQQDDSSLVDDILTKLGSSETVDESKLIDWGILPGPFVNPEQGFGIGVAAVGLYTPYDWQ KGDPYSTVTVTSYGSTSGSYGLGLNNRTYLKGDKVRLLGEAWISHTPGYYWGIGSQAAENDSNKVQYEGQRLQLSPKVAV EVAPNTYAKLGWQWQSFSKVDGVDGDILPSEVANATSSGVLVGMEYDTRDFEPNPMRGQFLDIEWIANRDSLGSDEDYDN LVANYRLYQQWSDTTIVAMEVYSQSIFGDAPWFDYAQLGDDQRMRGYYQGQYRDKHQLSTQVEIRRTIAGRHGVVGWLGA GNIAPTYHDLFESSWLPTVGVGYRFAFKARINVRVDLGVGKDSTGFYFQINEAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41539; Mature: 41539
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASYTSMVATLLLAPSSFAMQQDDSSLVDDILTKLGSSETVDESKLIDWGILPGPFVNP CCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCEECCCCCCCCCCC EQGFGIGVAAVGLYTPYDWQKGDPYSTVTVTSYGSTSGSYGLGLNNRTYLKGDKVRLLGE CCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCEEECCCCEEEEEH AWISHTPGYYWGIGSQAAENDSNKVQYEGQRLQLSPKVAVEVAPNTYAKLGWQWQSFSKV HHHCCCCCEEECCCCCCCCCCCCEEEECCCEEEECCCEEEEECCCCHHHCCCCCCCCCCC DGVDGDILPSEVANATSSGVLVGMEYDTRDFEPNPMRGQFLDIEWIANRDSLGSDEDYDN CCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHH LVANYRLYQQWSDTTIVAMEVYSQSIFGDAPWFDYAQLGDDQRMRGYYQGQYRDKHQLST HHHHEEEEEECCCCEEEEEEEHHHHHCCCCCCCCHHHCCCCHHHCCEECCCCCCHHHHHH QVEIRRTIAGRHGVVGWLGAGNIAPTYHDLFESSWLPTVGVGYRFAFKARINVRVDLGVG HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEECCC KDSTGFYFQINEAF CCCCCEEEEEECCC >Mature Secondary Structure MKASYTSMVATLLLAPSSFAMQQDDSSLVDDILTKLGSSETVDESKLIDWGILPGPFVNP CCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCEECCCCCCCCCCC EQGFGIGVAAVGLYTPYDWQKGDPYSTVTVTSYGSTSGSYGLGLNNRTYLKGDKVRLLGE CCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCEEECCCCEEEEEH AWISHTPGYYWGIGSQAAENDSNKVQYEGQRLQLSPKVAVEVAPNTYAKLGWQWQSFSKV HHHCCCCCEEECCCCCCCCCCCCEEEECCCEEEECCCEEEEECCCCHHHCCCCCCCCCCC DGVDGDILPSEVANATSSGVLVGMEYDTRDFEPNPMRGQFLDIEWIANRDSLGSDEDYDN CCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHH LVANYRLYQQWSDTTIVAMEVYSQSIFGDAPWFDYAQLGDDQRMRGYYQGQYRDKHQLST HHHHEEEEEECCCCEEEEEEEHHHHHCCCCCCCCHHHCCCCHHHCCEECCCCCCHHHHHH QVEIRRTIAGRHGVVGWLGAGNIAPTYHDLFESSWLPTVGVGYRFAFKARINVRVDLGVG HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEECCC KDSTGFYFQINEAF CCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA