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The map label for this gene is 156977846

Identifier: 156977846

GI number: 156977846

Start: 1774703

End: 1775590

Strand: Reverse

Name: 156977846

Synonym: VIBHAR_06634

Alternate gene names: NA

Gene position: 1775590-1774703 (Counterclockwise)

Preceding gene: 156977847

Following gene: 156977843

Centisome position: 80.56

GC content: 46.73

Gene sequence:

>888_bases
ATGGACAAACTTAATCGTGTTCTGCTCGTAGCTGGTACGCATGGTAATGAGCTTTCTGGCATTTATCTTCAAAAGCTCAT
CAAAGATCGTCTTTACGATGCTGAACGCTCAACGTTCAGCACTCACTGTGTGCTTGGCAACCCGGAAGCGGTAAAGCAAA
ACGTTCGTTATGTTGAGACGGATTTAAACCGCGAGTTTGCGCTTGCGAAATCATCAGCCTCTTCTCATGGTGAAGGCGGG
AGCCTGCAAGAGACAGAATTGGCAAAGCAATTTACCCAAACTCATGCCGCTGAAGAAAAGCAACTTATTGTCGACCTACA
TAACACCACCAGTAACATGGGCGCGACCTTGATTTTGGTTTCTAACGACGTGTTCTATCGCAAGATGGGGGCTTATGTGA
AGCAACGCATGCCAGAAGCCAACATCTTGTTTGAAGACAGAAAAGCGTGGGATGATCAACCTTACTTGTGCACCACTGGG
CAGCATGGTGTGATGATTGAAGTTGGGGCTCAAGCGCATGGCTCGCTAAAGTACGAGACTCTTGAGCTGATGAAAAAGAT
GCTTACTATGGTGCTCGATTACCTTGAACAGCATAACCTTGGTCGAGTTGGTGAGTTGAACGACTACGACGCGTATTTTT
ACACCGAAGAAGTGATGATCCCTGTCGACCACGATGGTATGCGTGCCGCAATAGTGCACCCTATGATCTGTGGACGAGAT
TTCGAAGTGGTGAAACCTGGAGAACCCTTACTCGCAACTTTCTTTGGTTACGACATTTTTTGGGAAGGCAAACAGGAGAT
CTATCCGCACTTCATCAATGAGAGTGCGTACAGCAAAGCCAATATCGCTATGGCACTTGCTGAGAAAAGGCAGGTTAATG
TGGAATAA

Upstream 100 bases:

>100_bases
TATGAAGGCGTAGGGAAAGGAGCAATGGCGTTTCGCTAAGAAGGCGCCGCCGAATCTCAATCAAAACTCACTTTTACTCA
ATATTTGGAATATCACTTTT

Downstream 100 bases:

>100_bases
GTAGCGGCTGATTTGAAGAGCAATTTGAAACTCTAAGTGGGATGACATTTTCACCCCACTTAGCTGCTAGTTGCTCGTCA
CGATTGGCTGGAAAAAAGCG

Product: aspartoacylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MDKLNRVLLVAGTHGNELSGIYLQKLIKDRLYDAERSTFSTHCVLGNPEAVKQNVRYVETDLNREFALAKSSASSHGEGG
SLQETELAKQFTQTHAAEEKQLIVDLHNTTSNMGATLILVSNDVFYRKMGAYVKQRMPEANILFEDRKAWDDQPYLCTTG
QHGVMIEVGAQAHGSLKYETLELMKKMLTMVLDYLEQHNLGRVGELNDYDAYFYTEEVMIPVDHDGMRAAIVHPMICGRD
FEVVKPGEPLLATFFGYDIFWEGKQEIYPHFINESAYSKANIAMALAEKRQVNVE

Sequences:

>Translated_295_residues
MDKLNRVLLVAGTHGNELSGIYLQKLIKDRLYDAERSTFSTHCVLGNPEAVKQNVRYVETDLNREFALAKSSASSHGEGG
SLQETELAKQFTQTHAAEEKQLIVDLHNTTSNMGATLILVSNDVFYRKMGAYVKQRMPEANILFEDRKAWDDQPYLCTTG
QHGVMIEVGAQAHGSLKYETLELMKKMLTMVLDYLEQHNLGRVGELNDYDAYFYTEEVMIPVDHDGMRAAIVHPMICGRD
FEVVKPGEPLLATFFGYDIFWEGKQEIYPHFINESAYSKANIAMALAEKRQVNVE
>Mature_295_residues
MDKLNRVLLVAGTHGNELSGIYLQKLIKDRLYDAERSTFSTHCVLGNPEAVKQNVRYVETDLNREFALAKSSASSHGEGG
SLQETELAKQFTQTHAAEEKQLIVDLHNTTSNMGATLILVSNDVFYRKMGAYVKQRMPEANILFEDRKAWDDQPYLCTTG
QHGVMIEVGAQAHGSLKYETLELMKKMLTMVLDYLEQHNLGRVGELNDYDAYFYTEEVMIPVDHDGMRAAIVHPMICGRD
FEVVKPGEPLLATFFGYDIFWEGKQEIYPHFINESAYSKANIAMALAEKRQVNVE

Specific function: Unknown

COG id: COG2988

COG function: function code E; Succinylglutamate desuccinylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AspA/AstE family. Aspartoacylase subfamily [H]

Homologues:

Organism=Homo sapiens, GI18087825, Length=297, Percent_Identity=31.986531986532, Blast_Score=160, Evalue=9e-40,
Organism=Homo sapiens, GI4557335, Length=298, Percent_Identity=32.8859060402685, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI189339202, Length=298, Percent_Identity=32.8859060402685, Blast_Score=145, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016708
- InterPro:   IPR007036 [H]

Pfam domain/function: PF04952 AstE_AspA [H]

EC number: =3.5.1.15 [H]

Molecular weight: Translated: 33409; Mature: 33409

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLNRVLLVAGTHGNELSGIYLQKLIKDRLYDAERSTFSTHCVLGNPEAVKQNVRYVET
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCHHEEC
DLNREFALAKSSASSHGEGGSLQETELAKQFTQTHAAEEKQLIVDLHNTTSNMGATLILV
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEE
SNDVFYRKMGAYVKQRMPEANILFEDRKAWDDQPYLCTTGQHGVMIEVGAQAHGSLKYET
ECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHH
LELMKKMLTMVLDYLEQHNLGRVGELNDYDAYFYTEEVMIPVDHDGMRAAIVHPMICGRD
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEHHHHHHHCCCC
FEVVKPGEPLLATFFGYDIFWEGKQEIYPHFINESAYSKANIAMALAEKRQVNVE
CEEECCCCCCEEHHHCCEEEECCCHHHCHHHHCCCCCCHHHHHEEEHHCCCCCCC
>Mature Secondary Structure
MDKLNRVLLVAGTHGNELSGIYLQKLIKDRLYDAERSTFSTHCVLGNPEAVKQNVRYVET
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCHHEEC
DLNREFALAKSSASSHGEGGSLQETELAKQFTQTHAAEEKQLIVDLHNTTSNMGATLILV
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEE
SNDVFYRKMGAYVKQRMPEANILFEDRKAWDDQPYLCTTGQHGVMIEVGAQAHGSLKYET
ECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHH
LELMKKMLTMVLDYLEQHNLGRVGELNDYDAYFYTEEVMIPVDHDGMRAAIVHPMICGRD
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEHHHHHHHCCCC
FEVVKPGEPLLATFFGYDIFWEGKQEIYPHFINESAYSKANIAMALAEKRQVNVE
CEEECCCCCCEEHHHCCEEEECCCHHHCHHHHCCCCCCHHHHHEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]