| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977820
Identifier: 156977820
GI number: 156977820
Start: 1756729
End: 1757160
Strand: Direct
Name: 156977820
Synonym: VIBHAR_06608
Alternate gene names: NA
Gene position: 1756729-1757160 (Clockwise)
Preceding gene: 156977819
Following gene: 156977822
Centisome position: 79.71
GC content: 43.75
Gene sequence:
>432_bases ATGAATCAACTTACCGACGAAAACCAAAAACGATTTGTTGCCGTAATCAGTAAAAAAGTCGAAGTGGGACGCGCCGTTAA CGTAGTAGGACACTTGAGTGTAAGCCTTGCGAATCAACTTTCTGATGGCGACGCAGTCTACACCGACTACTACGACCTCG ACGACAATGTTCATCCAAATATCTCGCACTATCCGTTTATCGTCTTGAGATCGGATAACGCCAACAAAATCAGAAAGCTT CGCCAAGAAGTTCTCGATAAAGGCATCCCCTTTTCCGATTTCACTCATACCATGGTAGAAGGCGGCTCTGAAATACAACA GCAAACAACCAAAAACACGCCAGAAGCTGAATTAGAATACTTGGGTATTTGCTTGTTCGGCGAGACTGAAACACTTCGAG AATTGACCAAGAAGTTCAGCTTATATCGCTAA
Upstream 100 bases:
>100_bases GGCTTTTCGGCAGCAATGTTAGAAACAAAATTGCGCGCGCGAAGAAATACAATGGAGACAGTTAAACAATAGCCAGATCA TTAGAGAAACGAGGTCCTCC
Downstream 100 bases:
>100_bases CACATAGAGATCAGCTTCCTTGTTCCCTAACCAAATGGTTCTTAATAGGAAGTCGAGCTAGCAATGTCGCCTCAGAGACA ATCGAGTAGGAGGAGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNQLTDENQKRFVAVISKKVEVGRAVNVVGHLSVSLANQLSDGDAVYTDYYDLDDNVHPNISHYPFIVLRSDNANKIRKL RQEVLDKGIPFSDFTHTMVEGGSEIQQQTTKNTPEAELEYLGICLFGETETLRELTKKFSLYR
Sequences:
>Translated_143_residues MNQLTDENQKRFVAVISKKVEVGRAVNVVGHLSVSLANQLSDGDAVYTDYYDLDDNVHPNISHYPFIVLRSDNANKIRKL RQEVLDKGIPFSDFTHTMVEGGSEIQQQTTKNTPEAELEYLGICLFGETETLRELTKKFSLYR >Mature_143_residues MNQLTDENQKRFVAVISKKVEVGRAVNVVGHLSVSLANQLSDGDAVYTDYYDLDDNVHPNISHYPFIVLRSDNANKIRKL RQEVLDKGIPFSDFTHTMVEGGSEIQQQTTKNTPEAELEYLGICLFGETETLRELTKKFSLYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16267; Mature: 16267
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLTDENQKRFVAVISKKVEVGRAVNVVGHLSVSLANQLSDGDAVYTDYYDLDDNVHPN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC ISHYPFIVLRSDNANKIRKLRQEVLDKGIPFSDFTHTMVEGGSEIQQQTTKNTPEAELEY CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCEEE LGICLFGETETLRELTKKFSLYR EEEEEECCHHHHHHHHHHHCCCC >Mature Secondary Structure MNQLTDENQKRFVAVISKKVEVGRAVNVVGHLSVSLANQLSDGDAVYTDYYDLDDNVHPN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC ISHYPFIVLRSDNANKIRKLRQEVLDKGIPFSDFTHTMVEGGSEIQQQTTKNTPEAELEY CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCEEE LGICLFGETETLRELTKKFSLYR EEEEEECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA