| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977811
Identifier: 156977811
GI number: 156977811
Start: 1744614
End: 1747367
Strand: Direct
Name: 156977811
Synonym: VIBHAR_06599
Alternate gene names: NA
Gene position: 1744614-1747367 (Clockwise)
Preceding gene: 156977810
Following gene: 156977812
Centisome position: 79.16
GC content: 50.44
Gene sequence:
>2754_bases ATGATTTTGAGGGGACCTCGTGTCCCCTTTTCTCGTGGAATAAAAACAATGAAACTAAAAAGAACCCTACTCTCTACTGC AGTGTTAACCGCCATGCTTGGTCTTGCTGGTTGTGGCAGCGACTCTGATCCGGAAACTCCGGTTATCTCTACCCCTACTT TGGAATTCGTTGATACCTTGATCGGCACTAAAGGTCTTGGCAACGTTAACCCTTCTCCAGTCATGCCAGAAGGTATGATT CAACCGTCACCAGATAACTTCGATCCAAACGGTTGGAATGGTAAAGGCTCACCTGTCGAATACGATCCTGTGCACAGCCT GCTTTCTGGCTTCTCAATGACCCACATTTCTGGCGCAGGTAAAGGCGACCTAAACGACTTCGCTTTCTTGCCATACACAG GCTTCAATACCGATGCCGTAACCATGGATAAAAGCTCGGAAGTGGCAGAAGTTGGTTACTACTCGGTTGACCTTGTAGAA ACCGGCGTAAAAGCTGAACTGTCTGCAACCGACCGCGTGGCGTTCCAACGTTACACCTTCAAACCGGGTGAAGACCGCAA AGTACGTATCGTTCTTCAACACGAACTGTTGGAGCAATACGGCAACCACTCTCGCAGCATCTACTACAAACGCGTTAATG ACACCACCGTCGTAGGCGCGCGTACCTCAAACGAATGGGGTCAATGGCAAACCGTATTCTTCGCGGCAGAATTCTCTGAT CCAATCATTGAAGAAAACCTGTACACCAAGCTGGCTTCTGAAAGCAAACTGACGCCAACTGACGCTACGGAAGTCGGCTT GGAAGATTACCGCGGCTACGCAGAGCACAAACCAATGCCGGGCGAACCAGAACCTGACCCAGAACGTTTGGCAAAACGCG CAAACGATGTCCTGACGCATTTGAACTTTGGCAAGAGCGATGAGCCATTGGTGGTCAAAGTAGCGATTTCTGGCACTGGC GTTGACGGCGCACTGAAAAACCTAGAAGCAGACACCAACGGCTGGGATTTCGACAACGTCGTACAACAAAACCGCGTGGC TTGGGAAAACATCCTTGGCGAGTTTGAACTGGAAGGCGGCAACAAAGCTGACAAAACCATGTTCTACACCTCGCTCTACC GTACGTTTGTTGCCCCATTCCTATACCAAGACGTGGATGGCAAATACCGTGGCATGGATGGCAAAGTGCACCAAGCAGAA GATGGCTTAGTCAACTACTCAGTGTACTCAATGTGGGATACGTTCCGCGCCGCACACCCACTGAAAACCATCATCGATAA AGACCGCGCAATTGAACACGCACGCGATCTATTGAACAAATACCAAACGGGCGGCGTGCTGCCAAAATGGGAACTGCACT CGGATTACACCGGTGAAATGGTCGGTCACCCTGCGGTCTCGGTAATTGCCGATATCATGGTCAAACACCCAGAAGCCTTT ACTGCTGCCGAGTTTGATTTAGCACTGAAAGCCGCTGACGAAACAGTCAACTTCAACCTTGATAAAACCGAAAGCTGGGT GCCTTACCAAGACGCGTGGAACGGTGACAAACGCTTCACGGTCATGACGCGTCATAACGACTACCAAGAAGACGTCGGCT TTATTCCAGCCAACACCAAATGGGCGCCGGATTCAGGCGATAAACCGGGTTACGTGGAAGGCTTGAAAGTTGACAAATAC GACGAGCTCGTGAACGAATCGGTGTCTTACGGTCTTGAGAACGCTTACTACGACTGGTGTATCGCTCAGATCGCTAAACT TGCGGGCAACGACCAGCAGTACGACCGTTACATGGCACGCTCAGAATCGTTCAAGAACTACTTCGATTACAACCCAGAAC AATACGGCAAACTGCAAGACACCAAAGGCAACGCATTGGGTGCAACGGGCTTTATGCGTCCGGCTTACATGAACAGCGGC AGCAAGGTTTGGGCAAACAACCTGAAAGCCGAATGTTTGGACGAGAACATGGCGCTGTCTATCGCAGACGGTATGGACTA CAACGCCTGTAAAGACCGCAAAGCACTCAATGAAAGTGACGTGTTCTGGCCTTACCGCGCCGAGCACCGTGGTGAAGACT TCACCGAAGGCAATACATGGCAATGGACATGGTTTGCACCGCACAACTTGAACGGTCTGGCTAACGTGATGGGTGGCGAG CACATCGACCGTACTGACTTCTCTCTTCCTGAAGACGTAACCGAACAAGGCAAAGCGGCATTCCTCGCTAACTTAAATGC GCTGTTTAATGCGGACTCCAACGCCGATACGAGCCAATCACACGACATGTCGGGTTACATCGGTCAGTTCGTGATGGGTA ACGAGCCTGATCACCACGTGCCTTACCTCTACAACTGGACAGCTGAGCCTTGGAAGACACAAGAAATCGTCGACCAAGCG ATGAACGAATTCTACCACCCAACGCATGAAGGTCTGATCGGTAACGAAGACGTCGGTCAAATGTCTGCGTGGTACGTGAT GTCTGCATTGGGCTTCTACCAAGTCACACCGGGTGAAGCAAGTTACACCATTGGTCGTCCTCTGTTCGACAAAGCCGTGA TTCCAGTCGCGGACGGTAAATTCACCATCACCTCAGAAAACAACAGCCAAGAGAGCATCTACGTGAAGTCGGTGACCATC AACGGCAAACAATTGAGTGACAACTTCAGCTTCGCGCACAGCGATTTGAAAGACGGTGGTGAACTGCATTTCGTTATGAC TTCAGACAAATCTGAAGCGATGAAAGCGCAATAA
Upstream 100 bases:
>100_bases ACAACACCTTCCAGCACAGCGAATTCAAAGCAGGCGGCCAACTGCACTTCGTGATGACAGCTGACAAGTCTGAAGCAATG CAAGCCTACCTAGGCGAATA
Downstream 100 bases:
>100_bases CCGACACCTATCCAAATAACGAAAGGGGGCATCTAGCCCTGAGGGCTCCCCACAACTAGCATAGAAGAATCATGTAGATA GCGTGAAAAGTAGGCAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Cell Wall Antigen; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Glycosyl Hydrolase; Antigen; Glycosyltransferase; Lipoprotein
Number of amino acids: Translated: 917; Mature: 917
Protein sequence:
>917_residues MILRGPRVPFSRGIKTMKLKRTLLSTAVLTAMLGLAGCGSDSDPETPVISTPTLEFVDTLIGTKGLGNVNPSPVMPEGMI QPSPDNFDPNGWNGKGSPVEYDPVHSLLSGFSMTHISGAGKGDLNDFAFLPYTGFNTDAVTMDKSSEVAEVGYYSVDLVE TGVKAELSATDRVAFQRYTFKPGEDRKVRIVLQHELLEQYGNHSRSIYYKRVNDTTVVGARTSNEWGQWQTVFFAAEFSD PIIEENLYTKLASESKLTPTDATEVGLEDYRGYAEHKPMPGEPEPDPERLAKRANDVLTHLNFGKSDEPLVVKVAISGTG VDGALKNLEADTNGWDFDNVVQQNRVAWENILGEFELEGGNKADKTMFYTSLYRTFVAPFLYQDVDGKYRGMDGKVHQAE DGLVNYSVYSMWDTFRAAHPLKTIIDKDRAIEHARDLLNKYQTGGVLPKWELHSDYTGEMVGHPAVSVIADIMVKHPEAF TAAEFDLALKAADETVNFNLDKTESWVPYQDAWNGDKRFTVMTRHNDYQEDVGFIPANTKWAPDSGDKPGYVEGLKVDKY DELVNESVSYGLENAYYDWCIAQIAKLAGNDQQYDRYMARSESFKNYFDYNPEQYGKLQDTKGNALGATGFMRPAYMNSG SKVWANNLKAECLDENMALSIADGMDYNACKDRKALNESDVFWPYRAEHRGEDFTEGNTWQWTWFAPHNLNGLANVMGGE HIDRTDFSLPEDVTEQGKAAFLANLNALFNADSNADTSQSHDMSGYIGQFVMGNEPDHHVPYLYNWTAEPWKTQEIVDQA MNEFYHPTHEGLIGNEDVGQMSAWYVMSALGFYQVTPGEASYTIGRPLFDKAVIPVADGKFTITSENNSQESIYVKSVTI NGKQLSDNFSFAHSDLKDGGELHFVMTSDKSEAMKAQ
Sequences:
>Translated_917_residues MILRGPRVPFSRGIKTMKLKRTLLSTAVLTAMLGLAGCGSDSDPETPVISTPTLEFVDTLIGTKGLGNVNPSPVMPEGMI QPSPDNFDPNGWNGKGSPVEYDPVHSLLSGFSMTHISGAGKGDLNDFAFLPYTGFNTDAVTMDKSSEVAEVGYYSVDLVE TGVKAELSATDRVAFQRYTFKPGEDRKVRIVLQHELLEQYGNHSRSIYYKRVNDTTVVGARTSNEWGQWQTVFFAAEFSD PIIEENLYTKLASESKLTPTDATEVGLEDYRGYAEHKPMPGEPEPDPERLAKRANDVLTHLNFGKSDEPLVVKVAISGTG VDGALKNLEADTNGWDFDNVVQQNRVAWENILGEFELEGGNKADKTMFYTSLYRTFVAPFLYQDVDGKYRGMDGKVHQAE DGLVNYSVYSMWDTFRAAHPLKTIIDKDRAIEHARDLLNKYQTGGVLPKWELHSDYTGEMVGHPAVSVIADIMVKHPEAF TAAEFDLALKAADETVNFNLDKTESWVPYQDAWNGDKRFTVMTRHNDYQEDVGFIPANTKWAPDSGDKPGYVEGLKVDKY DELVNESVSYGLENAYYDWCIAQIAKLAGNDQQYDRYMARSESFKNYFDYNPEQYGKLQDTKGNALGATGFMRPAYMNSG SKVWANNLKAECLDENMALSIADGMDYNACKDRKALNESDVFWPYRAEHRGEDFTEGNTWQWTWFAPHNLNGLANVMGGE HIDRTDFSLPEDVTEQGKAAFLANLNALFNADSNADTSQSHDMSGYIGQFVMGNEPDHHVPYLYNWTAEPWKTQEIVDQA MNEFYHPTHEGLIGNEDVGQMSAWYVMSALGFYQVTPGEASYTIGRPLFDKAVIPVADGKFTITSENNSQESIYVKSVTI NGKQLSDNFSFAHSDLKDGGELHFVMTSDKSEAMKAQ >Mature_917_residues MILRGPRVPFSRGIKTMKLKRTLLSTAVLTAMLGLAGCGSDSDPETPVISTPTLEFVDTLIGTKGLGNVNPSPVMPEGMI QPSPDNFDPNGWNGKGSPVEYDPVHSLLSGFSMTHISGAGKGDLNDFAFLPYTGFNTDAVTMDKSSEVAEVGYYSVDLVE TGVKAELSATDRVAFQRYTFKPGEDRKVRIVLQHELLEQYGNHSRSIYYKRVNDTTVVGARTSNEWGQWQTVFFAAEFSD PIIEENLYTKLASESKLTPTDATEVGLEDYRGYAEHKPMPGEPEPDPERLAKRANDVLTHLNFGKSDEPLVVKVAISGTG VDGALKNLEADTNGWDFDNVVQQNRVAWENILGEFELEGGNKADKTMFYTSLYRTFVAPFLYQDVDGKYRGMDGKVHQAE DGLVNYSVYSMWDTFRAAHPLKTIIDKDRAIEHARDLLNKYQTGGVLPKWELHSDYTGEMVGHPAVSVIADIMVKHPEAF TAAEFDLALKAADETVNFNLDKTESWVPYQDAWNGDKRFTVMTRHNDYQEDVGFIPANTKWAPDSGDKPGYVEGLKVDKY DELVNESVSYGLENAYYDWCIAQIAKLAGNDQQYDRYMARSESFKNYFDYNPEQYGKLQDTKGNALGATGFMRPAYMNSG SKVWANNLKAECLDENMALSIADGMDYNACKDRKALNESDVFWPYRAEHRGEDFTEGNTWQWTWFAPHNLNGLANVMGGE HIDRTDFSLPEDVTEQGKAAFLANLNALFNADSNADTSQSHDMSGYIGQFVMGNEPDHHVPYLYNWTAEPWKTQEIVDQA MNEFYHPTHEGLIGNEDVGQMSAWYVMSALGFYQVTPGEASYTIGRPLFDKAVIPVADGKFTITSENNSQESIYVKSVTI NGKQLSDNFSFAHSDLKDGGELHFVMTSDKSEAMKAQ
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102393; Mature: 102393
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRGPRVPFSRGIKTMKLKRTLLSTAVLTAMLGLAGCGSDSDPETPVISTPTLEFVDTL CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHH IGTKGLGNVNPSPVMPEGMIQPSPDNFDPNGWNGKGSPVEYDPVHSLLSGFSMTHISGAG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCC KGDLNDFAFLPYTGFNTDAVTMDKSSEVAEVGYYSVDLVETGVKAELSATDRVAFQRYTF CCCCCCEEEEEECCCCCCEEEECCCCCHHHHCCEEEEEECCCCCEECCCHHHHHEEEEEC KPGEDRKVRIVLQHELLEQYGNHSRSIYYKRVNDTTVVGARTSNEWGQWQTVFFAAEFSD CCCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCC PIIEENLYTKLASESKLTPTDATEVGLEDYRGYAEHKPMPGEPEPDPERLAKRANDVLTH CHHHHHHHHHHHCCCCCCCCCHHHHCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH LNFGKSDEPLVVKVAISGTGVDGALKNLEADTNGWDFDNVVQQNRVAWENILGEFELEGG CCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCC NKADKTMFYTSLYRTFVAPFLYQDVDGKYRGMDGKVHQAEDGLVNYSVYSMWDTFRAAHP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEHHHHHHHHHHHHCH LKTIIDKDRAIEHARDLLNKYQTGGVLPKWELHSDYTGEMVGHPAVSVIADIMVKHPEAF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH TAAEFDLALKAADETVNFNLDKTESWVPYQDAWNGDKRFTVMTRHNDYQEDVGFIPANTK HHHHHEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCC WAPDSGDKPGYVEGLKVDKYDELVNESVSYGLENAYYDWCIAQIAKLAGNDQQYDRYMAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH SESFKNYFDYNPEQYGKLQDTKGNALGATGFMRPAYMNSGSKVWANNLKAECLDENMALS HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCHHHCCCCCEEE IADGMDYNACKDRKALNESDVFWPYRAEHRGEDFTEGNTWQWTWFAPHNLNGLANVMGGE EECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC HIDRTDFSLPEDVTEQGKAAFLANLNALFNADSNADTSQSHDMSGYIGQFVMGNEPDHHV CCCCCCCCCCHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCC PYLYNWTAEPWKTQEIVDQAMNEFYHPTHEGLIGNEDVGQMSAWYVMSALGFYQVTPGEA CEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCC SYTIGRPLFDKAVIPVADGKFTITSENNSQESIYVKSVTINGKQLSDNFSFAHSDLKDGG CEECCCCCHHCCEEEECCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCC ELHFVMTSDKSEAMKAQ EEEEEEECCCCHHHCCC >Mature Secondary Structure MILRGPRVPFSRGIKTMKLKRTLLSTAVLTAMLGLAGCGSDSDPETPVISTPTLEFVDTL CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHH IGTKGLGNVNPSPVMPEGMIQPSPDNFDPNGWNGKGSPVEYDPVHSLLSGFSMTHISGAG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCC KGDLNDFAFLPYTGFNTDAVTMDKSSEVAEVGYYSVDLVETGVKAELSATDRVAFQRYTF CCCCCCEEEEEECCCCCCEEEECCCCCHHHHCCEEEEEECCCCCEECCCHHHHHEEEEEC KPGEDRKVRIVLQHELLEQYGNHSRSIYYKRVNDTTVVGARTSNEWGQWQTVFFAAEFSD CCCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCC PIIEENLYTKLASESKLTPTDATEVGLEDYRGYAEHKPMPGEPEPDPERLAKRANDVLTH CHHHHHHHHHHHCCCCCCCCCHHHHCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH LNFGKSDEPLVVKVAISGTGVDGALKNLEADTNGWDFDNVVQQNRVAWENILGEFELEGG CCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCC NKADKTMFYTSLYRTFVAPFLYQDVDGKYRGMDGKVHQAEDGLVNYSVYSMWDTFRAAHP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEHHHHHHHHHHHHCH LKTIIDKDRAIEHARDLLNKYQTGGVLPKWELHSDYTGEMVGHPAVSVIADIMVKHPEAF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH TAAEFDLALKAADETVNFNLDKTESWVPYQDAWNGDKRFTVMTRHNDYQEDVGFIPANTK HHHHHEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCC WAPDSGDKPGYVEGLKVDKYDELVNESVSYGLENAYYDWCIAQIAKLAGNDQQYDRYMAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH SESFKNYFDYNPEQYGKLQDTKGNALGATGFMRPAYMNSGSKVWANNLKAECLDENMALS HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCHHHCCCCCEEE IADGMDYNACKDRKALNESDVFWPYRAEHRGEDFTEGNTWQWTWFAPHNLNGLANVMGGE EECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC HIDRTDFSLPEDVTEQGKAAFLANLNALFNADSNADTSQSHDMSGYIGQFVMGNEPDHHV CCCCCCCCCCHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCC PYLYNWTAEPWKTQEIVDQAMNEFYHPTHEGLIGNEDVGQMSAWYVMSALGFYQVTPGEA CEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCC SYTIGRPLFDKAVIPVADGKFTITSENNSQESIYVKSVTINGKQLSDNFSFAHSDLKDGG CEECCCCCHHCCEEEECCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCC ELHFVMTSDKSEAMKAQ EEEEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA