Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156977809

Identifier: 156977809

GI number: 156977809

Start: 1740456

End: 1742060

Strand: Direct

Name: 156977809

Synonym: VIBHAR_06597

Alternate gene names: NA

Gene position: 1740456-1742060 (Clockwise)

Preceding gene: 156977808

Following gene: 156977810

Centisome position: 78.97

GC content: 51.15

Gene sequence:

>1605_bases
GTGAAAGTTGCACGCTGGGTTCTTAGAGGGACGGCACTTGGTAACAAGTGTCGTCTACTCGACGATAAGATTGATACGCT
GAAAGAGTCGATCCGCACTGCCGATGCCAACAAAGATGGCAAAGCAGACTTCACGCGCTACGACACTTTCTCTTTGTGGG
ATACCTACCGCGCAGTTCAACCGCTGTCTTCGATTCTTGAGCCTGACCGCCTAGCCGACGTGGTGCTGTCTATGCTGTCT
TACGCCGAAGAAGAATGGGTGGATGACAAAGGCAACGTGCGCAAAGGTCGCCTGCCTGAGTGGACATTCAAAGGCAACGA
AACTGGCATGATGATGGGCATGCACTCAACGCCTGTGATTCATGATGTGTTGTCGAAAGGCTCACTAGAAAAACGCATGA
TCGATCTTGGCTTCACAGAAGCAGAGCGCAAAGACGTTAAAGAACGTTTAGTTGAAGCGATGATCACTGACGCGCGCGCC
GCAACGAGCCAAGGCGTAGCATGGATCAAAGAGTACGAAGAACAAGGTTACGTGCCAGCGCAATTGCACGACACTCCACC
AGATTCTTACGGCGGTCACTCACCATTTAAAGACTCTTGGACAGCATCTTACTCGCTTGAGTACTCAATGAACGACTGGG
CAATCGCGCAATCGATCAAAGAAGTGTTCGGTGAAGAAGATCCACGCTACACCGAGTTCGCTAACCGTTCTAAAAACTGG
CAAGCGCAATTCGACTTCGGCGGTAAGCAGTACCAAGGTTGGTTCAAAGCCCGTGACTACGATGGCGAGTTTATCGATGC
AGGTTGGGTAGACCCAATCACCGGTCGTGCGGTGGGTAAAGACTGGCGTCCAGACATGTTTAACTGGGCATTCTCTGAAT
CGAACGGCTGGCAATACTCATTCAGTGTTCAGCACGACATTCATGGCTTGATTGACCTGATGACACGCTTCGATAAGACA
CAAAACCCTGAAGCAGAACGCGGTGACTTGTTCGCAGCACGCTTAGATGAGTACTGGTCAACCTACCCAGACCGCAATGC
TGGCGACAACCAATTCCCAGTGTTCAACACAGGTAACGTTGGTCAGCACGTACAAGGTAACGAACCAGATATCCACGTGC
CGTACTTGTACAACTACGTGGGTCAACCTTGGAAAGGTCAGGCAGCCATCGCCGCAGCGACCAACATTTGCTACAAGAAC
ACCGCTGACGGCATTTGTGGTAACGACGACTTCGGTACGCTCTCTGCGTGGTTCGTGTTCCGTGCACTTGGCTTCTACCC
AGTGAACGCTTCTTCTGGCATCTACGAAATCGGTACTCCGCTGTTTGAAAGCGCGTCTATCGATGTCGGCAACAACCAGA
AGTTCACCGTTACCGCGAAGAACGTTAGCCGCGAAAACATCTTCATTCAATCGGCTCGCTACAACGGCAAAGACTTCAAC
CGCACTTACCTGACTCATGACGAAATCATGTACGGCGGTGAGTTGGAGTTCGTGATGGGCGACAAACCAAATCAACGTTG
GGGCTCTCTAGAGCAAGATCTTCCACCAGCACAAGGCATCGGTGAGTTCTTGCATGAAGACGAGATGCCAGCAGGTTCTC
GTTAA

Upstream 100 bases:

>100_bases
AAAAAGGCAATGTCGTAACTCTTGGCATGAGCCTGCTCTCGCTGCTTTATAAGTTGCTGGGTGCCAATAGGTGCCTTCGT
GAAGGCTTGAGCCTAGTGCG

Downstream 100 bases:

>100_bases
TCCCAATAGTGACAACTCAGCCGGGGGAGCGCATCTCCCGGCTATCCCTACAAGAAAATTTTATAAGCAGTCCTTTATAA
ACAGTCTCTTATAAACACTT

Product: alpha-1,2-mannosidase

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Glycosyltransferase; Lipoprotein; Mannosidase

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MKVARWVLRGTALGNKCRLLDDKIDTLKESIRTADANKDGKADFTRYDTFSLWDTYRAVQPLSSILEPDRLADVVLSMLS
YAEEEWVDDKGNVRKGRLPEWTFKGNETGMMMGMHSTPVIHDVLSKGSLEKRMIDLGFTEAERKDVKERLVEAMITDARA
ATSQGVAWIKEYEEQGYVPAQLHDTPPDSYGGHSPFKDSWTASYSLEYSMNDWAIAQSIKEVFGEEDPRYTEFANRSKNW
QAQFDFGGKQYQGWFKARDYDGEFIDAGWVDPITGRAVGKDWRPDMFNWAFSESNGWQYSFSVQHDIHGLIDLMTRFDKT
QNPEAERGDLFAARLDEYWSTYPDRNAGDNQFPVFNTGNVGQHVQGNEPDIHVPYLYNYVGQPWKGQAAIAAATNICYKN
TADGICGNDDFGTLSAWFVFRALGFYPVNASSGIYEIGTPLFESASIDVGNNQKFTVTAKNVSRENIFIQSARYNGKDFN
RTYLTHDEIMYGGELEFVMGDKPNQRWGSLEQDLPPAQGIGEFLHEDEMPAGSR

Sequences:

>Translated_534_residues
MKVARWVLRGTALGNKCRLLDDKIDTLKESIRTADANKDGKADFTRYDTFSLWDTYRAVQPLSSILEPDRLADVVLSMLS
YAEEEWVDDKGNVRKGRLPEWTFKGNETGMMMGMHSTPVIHDVLSKGSLEKRMIDLGFTEAERKDVKERLVEAMITDARA
ATSQGVAWIKEYEEQGYVPAQLHDTPPDSYGGHSPFKDSWTASYSLEYSMNDWAIAQSIKEVFGEEDPRYTEFANRSKNW
QAQFDFGGKQYQGWFKARDYDGEFIDAGWVDPITGRAVGKDWRPDMFNWAFSESNGWQYSFSVQHDIHGLIDLMTRFDKT
QNPEAERGDLFAARLDEYWSTYPDRNAGDNQFPVFNTGNVGQHVQGNEPDIHVPYLYNYVGQPWKGQAAIAAATNICYKN
TADGICGNDDFGTLSAWFVFRALGFYPVNASSGIYEIGTPLFESASIDVGNNQKFTVTAKNVSRENIFIQSARYNGKDFN
RTYLTHDEIMYGGELEFVMGDKPNQRWGSLEQDLPPAQGIGEFLHEDEMPAGSR
>Mature_534_residues
MKVARWVLRGTALGNKCRLLDDKIDTLKESIRTADANKDGKADFTRYDTFSLWDTYRAVQPLSSILEPDRLADVVLSMLS
YAEEEWVDDKGNVRKGRLPEWTFKGNETGMMMGMHSTPVIHDVLSKGSLEKRMIDLGFTEAERKDVKERLVEAMITDARA
ATSQGVAWIKEYEEQGYVPAQLHDTPPDSYGGHSPFKDSWTASYSLEYSMNDWAIAQSIKEVFGEEDPRYTEFANRSKNW
QAQFDFGGKQYQGWFKARDYDGEFIDAGWVDPITGRAVGKDWRPDMFNWAFSESNGWQYSFSVQHDIHGLIDLMTRFDKT
QNPEAERGDLFAARLDEYWSTYPDRNAGDNQFPVFNTGNVGQHVQGNEPDIHVPYLYNYVGQPWKGQAAIAAATNICYKN
TADGICGNDDFGTLSAWFVFRALGFYPVNASSGIYEIGTPLFESASIDVGNNQKFTVTAKNVSRENIFIQSARYNGKDFN
RTYLTHDEIMYGGELEFVMGDKPNQRWGSLEQDLPPAQGIGEFLHEDEMPAGSR

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60597; Mature: 60597

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVARWVLRGTALGNKCRLLDDKIDTLKESIRTADANKDGKADFTRYDTFSLWDTYRAVQ
CCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHH
PLSSILEPDRLADVVLSMLSYAEEEWVDDKGNVRKGRLPEWTFKGNETGMMMGMHSTPVI
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEECCCCHHH
HDVLSKGSLEKRMIDLGFTEAERKDVKERLVEAMITDARAATSQGVAWIKEYEEQGYVPA
HHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCE
QLHDTPPDSYGGHSPFKDSWTASYSLEYSMNDWAIAQSIKEVFGEEDPRYTEFANRSKNW
EECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
QAQFDFGGKQYQGWFKARDYDGEFIDAGWVDPITGRAVGKDWRPDMFNWAFSESNGWQYS
EEEECCCCCHHCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEE
FSVQHDIHGLIDLMTRFDKTQNPEAERGDLFAARLDEYWSTYPDRNAGDNQFPVFNTGNV
EECHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
GQHVQGNEPDIHVPYLYNYVGQPWKGQAAIAAATNICYKNTADGICGNDDFGTLSAWFVF
CCCCCCCCCCEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
RALGFYPVNASSGIYEIGTPLFESASIDVGNNQKFTVTAKNVSRENIFIQSARYNGKDFN
HHHCCEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCC
RTYLTHDEIMYGGELEFVMGDKPNQRWGSLEQDLPPAQGIGEFLHEDEMPAGSR
CEEEECCCEEECCEEEEEECCCCCCHHCCCHHCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKVARWVLRGTALGNKCRLLDDKIDTLKESIRTADANKDGKADFTRYDTFSLWDTYRAVQ
CCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHH
PLSSILEPDRLADVVLSMLSYAEEEWVDDKGNVRKGRLPEWTFKGNETGMMMGMHSTPVI
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEECCCCHHH
HDVLSKGSLEKRMIDLGFTEAERKDVKERLVEAMITDARAATSQGVAWIKEYEEQGYVPA
HHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCE
QLHDTPPDSYGGHSPFKDSWTASYSLEYSMNDWAIAQSIKEVFGEEDPRYTEFANRSKNW
EECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
QAQFDFGGKQYQGWFKARDYDGEFIDAGWVDPITGRAVGKDWRPDMFNWAFSESNGWQYS
EEEECCCCCHHCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEE
FSVQHDIHGLIDLMTRFDKTQNPEAERGDLFAARLDEYWSTYPDRNAGDNQFPVFNTGNV
EECHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
GQHVQGNEPDIHVPYLYNYVGQPWKGQAAIAAATNICYKNTADGICGNDDFGTLSAWFVF
CCCCCCCCCCEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
RALGFYPVNASSGIYEIGTPLFESASIDVGNNQKFTVTAKNVSRENIFIQSARYNGKDFN
HHHCCEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCC
RTYLTHDEIMYGGELEFVMGDKPNQRWGSLEQDLPPAQGIGEFLHEDEMPAGSR
CEEEECCCEEECCEEEEEECCCCCCHHCCCHHCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA