| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977786
Identifier: 156977786
GI number: 156977786
Start: 1722492
End: 1722674
Strand: Direct
Name: 156977786
Synonym: VIBHAR_06574
Alternate gene names: NA
Gene position: 1722492-1722674 (Clockwise)
Preceding gene: 156977782
Following gene: 156977788
Centisome position: 78.15
GC content: 44.81
Gene sequence:
>183_bases ATGGCTTTTGATGATTACTGGAAGAAGGTTCGAGAAAAACACCTAAAGAGTGCCGACCTAGAGGGGCTTATTGTAAAGAG GGTTCGTGCCAATACAGGCAGTAAACGTCTCCCTTATCGCACAAAGTGTGGGGCACTGTGCGAGATCAAATATAACGAAG TTTGTGAGGCACAAAAAGAGTGA
Upstream 100 bases:
>100_bases TACTTAACGATTTTTAGGATTTTTCTGACATTAGAAACTGGAATGTGTTGCATAGAATAATAACAAATTTATAAAAATAA AAATGACAACACGGTGAAGT
Downstream 100 bases:
>100_bases TGCATTTGCACCACTCTTTTTATCAATCATTCACTTCTCTTATCAGGCGTCGATGAGGTAATTATCTCCTTCATCCTCTA GACGGTCGATCAGTCCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MAFDDYWKKVREKHLKSADLEGLIVKRVRANTGSKRLPYRTKCGALCEIKYNEVCEAQKE
Sequences:
>Translated_60_residues MAFDDYWKKVREKHLKSADLEGLIVKRVRANTGSKRLPYRTKCGALCEIKYNEVCEAQKE >Mature_59_residues AFDDYWKKVREKHLKSADLEGLIVKRVRANTGSKRLPYRTKCGALCEIKYNEVCEAQKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7018; Mature: 6887
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDDYWKKVREKHLKSADLEGLIVKRVRANTGSKRLPYRTKCGALCEIKYNEVCEAQKE CCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHCCCCCC >Mature Secondary Structure AFDDYWKKVREKHLKSADLEGLIVKRVRANTGSKRLPYRTKCGALCEIKYNEVCEAQKE CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA