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The map label for this gene is mtrC [H]

Identifier: 156977758

GI number: 156977758

Start: 1701851

End: 1703008

Strand: Reverse

Name: mtrC [H]

Synonym: VIBHAR_06546

Alternate gene names: 156977758

Gene position: 1703008-1701851 (Counterclockwise)

Preceding gene: 156977760

Following gene: 156977757

Centisome position: 77.27

GC content: 48.88

Gene sequence:

>1158_bases
ATGTTAGCAAAACCAGTATTACGTTGGCTTTTACCCTTCTTTGTGGTGGGCAGTTCTTATGCGGGTTATGCCGCAATTGC
TGCTACTGCGCCCGAGAAAGAGCCAACCAAAGACACCGTTACTGAACCGACGGTACAAACCTCTTCACTCTTTCCTACCG
ATCACAAAGTGGTTATCACCAGCCATGGTGAGATGGTTCCTTTCGAGAAAACACACTTAGCGGCGCAAGTTAGCGGCGAA
GTAGTCAGTTGGCACCCCAACTTTGTGACAGGTGGCATCGTTAAGCGTGGAGAGGTGTTATTCACGATTGAGAGTGATAA
CTACGAAGCGGCCGTTTTACAGGCAGAAGCTGGCTTGGCAAGCGCACGTGCTGCGTTGATCGAAGAGCAAGCCAAAGCGG
AAGTCGCAAAACGCCAAGCGAAAAAGTTAAGCGACAAACAAGTCACAGACCTTTACTTACGCAAGCCACATGTGTTGAGT
GCTCAGGCTCAAGTGAAGTCAGCTCAAGCTGCGCTGAAGCGAGCGAAGCGTGACCTAGAAAATTGCAAAGTAGTAGCGCC
ATATGATGCGCTCGTTGTTGAGCGTGAAATCGGTGTGGGTCAGTTTGTTTCTTCTGGTTCTCGTGTGGCAACACTGAACA
ATATCGAAGTGGCGGAAATCCACGTTCCTATCGCTGGCTTTGACAGTGCTTTTCTTCCTGAATCACTGAAAGAGCTGCGC
GCAACGGTTACGCAACAAGGCATTCTATCGACGACTCGTGAAGGTAAAGTCGTTCGAGATCTTGGCATGATCGACAGCGC
GACGCGCATGATCAACATGGTTATCCAAGTAAGAGACCCATATGGTCTCGACAATAATCAGCCGCCAATTAAGTTTGGCT
CGTATGTTGAAGTTAGCTTTACTGGTAAGGAACTTAAGCATATCTACCCTCTTCCTCAAGAGCTGGTGAGAAACCGCACT
GTATGGGTTGTGAATGGTGAAAATGAGCTTCAACCAAGAACGGTAAATGTCCTTCGTGCTGAGGGGGAATTCCTCCTCGT
GGGCGAGGGTCTTGAGCAATCAGACAAGTTGGTACTGACGTTGCCTGAGTACCCACAAAAAGGCATGGCTGTCCAAGTCG
CAAAAAAGAATGACGACTCCGAAACCGTCGTACAGTAA

Upstream 100 bases:

>100_bases
AGGATGCTAGGTTGCCGAATGTTCAGTTTGTTAACTCAGCTCTGAGGCGCAAGCCTGATGGAGACAAACAGGAGAATACA
AAAATAAAAAAGGAATCTTG

Downstream 100 bases:

>100_bases
GTAGGAGTCAATCATGGAAGAGAATCAACAAAAGGGCATCATTGCCTATTTTGCCAATAACTCTGTCGCCGCGAACCTAA
TGATGGTGTTCATCATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLAKPVLRWLLPFFVVGSSYAGYAAIAATAPEKEPTKDTVTEPTVQTSSLFPTDHKVVITSHGEMVPFEKTHLAAQVSGE
VVSWHPNFVTGGIVKRGEVLFTIESDNYEAAVLQAEAGLASARAALIEEQAKAEVAKRQAKKLSDKQVTDLYLRKPHVLS
AQAQVKSAQAALKRAKRDLENCKVVAPYDALVVEREIGVGQFVSSGSRVATLNNIEVAEIHVPIAGFDSAFLPESLKELR
ATVTQQGILSTTREGKVVRDLGMIDSATRMINMVIQVRDPYGLDNNQPPIKFGSYVEVSFTGKELKHIYPLPQELVRNRT
VWVVNGENELQPRTVNVLRAEGEFLLVGEGLEQSDKLVLTLPEYPQKGMAVQVAKKNDDSETVVQ

Sequences:

>Translated_385_residues
MLAKPVLRWLLPFFVVGSSYAGYAAIAATAPEKEPTKDTVTEPTVQTSSLFPTDHKVVITSHGEMVPFEKTHLAAQVSGE
VVSWHPNFVTGGIVKRGEVLFTIESDNYEAAVLQAEAGLASARAALIEEQAKAEVAKRQAKKLSDKQVTDLYLRKPHVLS
AQAQVKSAQAALKRAKRDLENCKVVAPYDALVVEREIGVGQFVSSGSRVATLNNIEVAEIHVPIAGFDSAFLPESLKELR
ATVTQQGILSTTREGKVVRDLGMIDSATRMINMVIQVRDPYGLDNNQPPIKFGSYVEVSFTGKELKHIYPLPQELVRNRT
VWVVNGENELQPRTVNVLRAEGEFLLVGEGLEQSDKLVLTLPEYPQKGMAVQVAKKNDDSETVVQ
>Mature_385_residues
MLAKPVLRWLLPFFVVGSSYAGYAAIAATAPEKEPTKDTVTEPTVQTSSLFPTDHKVVITSHGEMVPFEKTHLAAQVSGE
VVSWHPNFVTGGIVKRGEVLFTIESDNYEAAVLQAEAGLASARAALIEEQAKAEVAKRQAKKLSDKQVTDLYLRKPHVLS
AQAQVKSAQAALKRAKRDLENCKVVAPYDALVVEREIGVGQFVSSGSRVATLNNIEVAEIHVPIAGFDSAFLPESLKELR
ATVTQQGILSTTREGKVVRDLGMIDSATRMINMVIQVRDPYGLDNNQPPIKFGSYVEVSFTGKELKHIYPLPQELVRNRT
VWVVNGENELQPRTVNVLRAEGEFLLVGEGLEQSDKLVLTLPEYPQKGMAVQVAKKNDDSETVVQ

Specific function: Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 42183; Mature: 42183

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKPVLRWLLPFFVVGSSYAGYAAIAATAPEKEPTKDTVTEPTVQTSSLFPTDHKVVIT
CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
SHGEMVPFEKTHLAAQVSGEVVSWHPNFVTGGIVKRGEVLFTIESDNYEAAVLQAEAGLA
CCCCCCCCHHHHEEEEECCCEEEECCCEEECCEEECCEEEEEEECCCCEEEEEEECCCHH
SARAALIEEQAKAEVAKRQAKKLSDKQVTDLYLRKPHVLSAQAQVKSAQAALKRAKRDLE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHH
NCKVVAPYDALVVEREIGVGQFVSSGSRVATLNNIEVAEIHVPIAGFDSAFLPESLKELR
HCEEECCCHHEEEEECCCCHHHHCCCCEEEEECCEEEEEEEEEEECCCCCCCHHHHHHHH
ATVTQQGILSTTREGKVVRDLGMIDSATRMINMVIQVRDPYGLDNNQPPIKFGSYVEVSF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCEECCEEEEEE
TGKELKHIYPLPQELVRNRTVWVVNGENELQPRTVNVLRAEGEFLLVGEGLEQSDKLVLT
CCHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEE
LPEYPQKGMAVQVAKKNDDSETVVQ
CCCCCCCCCEEEEEECCCCCHHHCC
>Mature Secondary Structure
MLAKPVLRWLLPFFVVGSSYAGYAAIAATAPEKEPTKDTVTEPTVQTSSLFPTDHKVVIT
CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
SHGEMVPFEKTHLAAQVSGEVVSWHPNFVTGGIVKRGEVLFTIESDNYEAAVLQAEAGLA
CCCCCCCCHHHHEEEEECCCEEEECCCEEECCEEECCEEEEEEECCCCEEEEEEECCCHH
SARAALIEEQAKAEVAKRQAKKLSDKQVTDLYLRKPHVLSAQAQVKSAQAALKRAKRDLE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHH
NCKVVAPYDALVVEREIGVGQFVSSGSRVATLNNIEVAEIHVPIAGFDSAFLPESLKELR
HCEEECCCHHEEEEECCCCHHHHCCCCEEEEECCEEEEEEEEEEECCCCCCCHHHHHHHH
ATVTQQGILSTTREGKVVRDLGMIDSATRMINMVIQVRDPYGLDNNQPPIKFGSYVEVSF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCEECCEEEEEE
TGKELKHIYPLPQELVRNRTVWVVNGENELQPRTVNVLRAEGEFLLVGEGLEQSDKLVLT
CCHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEE
LPEYPQKGMAVQVAKKNDDSETVVQ
CCCCCCCCCEEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8196548 [H]