Click here to switch to the map view.

The map label for this gene is 156977744

Identifier: 156977744

GI number: 156977744

Start: 1683755

End: 1684570

Strand: Direct

Name: 156977744

Synonym: VIBHAR_06532

Alternate gene names: NA

Gene position: 1683755-1684570 (Clockwise)

Preceding gene: 156977743

Following gene: 156977745

Centisome position: 76.39

GC content: 43.14

Gene sequence:

>816_bases
ATGGTTAACAAGTTAGAATTTTCGCACGCAGTTGCTGCAATTCGAAAGGAGAGGGGGTTAACTCAAGGCCAATTAGCCGA
TGAGTTAGCAAGGAGTTACAGTGCTTTTGAGAGTTTAAACCAACCGACGTTAAGTCAATGGGAAAGCGGTAAAGTCACAC
CAAGTTTATTAAAACGACTCGCCTTCTCTCACTATATAGGCGAACAATACCAATACACTTCCAGCGAGTACAAACGTGTC
AAAACCTCGCAAAGTAAAAGCATTTACTTGAGCTTTAAAGACATTGTTTACCAGTATCAGGTTACCGATGTCAAAAGTTG
CTCCCTCAGCCAAATCAGCTTGTCCGAATACGAACAGATCGACGCAGTTCACAAGCAGTTAATCACACCAGGCGGTGTGG
AAGACACGCTGAACCAATTTGGTGAATCCCCCAGTAAGGCGCGCCTTTATTACTGCAAAGGTATGTTAGTTGGTCATCTC
ATTTACCAAGAGCTGAGGTCTGAATTTAGGATTCTCAGCTTATGGCATTTAGGACGGTCGATTTTGAAGTTTTTGGTCTC
AGATATCCTTCACGTAATGGGCAATGCCATCATCCATTTTCCCGTTCATGAGCCCGTGATTAAACAGCTTTTATTCGACA
TTTTCATACGGGATTTCTACCACCATAGACGAGTCACGTTTTTTAAAGCATCCGCCACACAAATATTTGAAAACCCCATG
GTAAAGCATTGCTTTGATGGGCTTTTGGACCTGGTGCTCTATCGCTTCCATCAAGTAGGAAATGAATTTATGCAGTCTCG
ACAGGAGGCCCACTAA

Upstream 100 bases:

>100_bases
AAATGATGTACCTCACTAAAAGATCAAGAACATAGAGTTTTGGCTCATTCTGAGCCGCTTCGAAGCAATTAAAAATATAA
TGAGTTCAGGACGTAGATAT

Downstream 100 bases:

>100_bases
TGCTGAACAACAACACAATCAAAAACACCATCTTATTGTTTACCTTCAATAATATTCAAGGTCGAGGTTTACAAACCGCC
ATTGAACAACAACTTGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MVNKLEFSHAVAAIRKERGLTQGQLADELARSYSAFESLNQPTLSQWESGKVTPSLLKRLAFSHYIGEQYQYTSSEYKRV
KTSQSKSIYLSFKDIVYQYQVTDVKSCSLSQISLSEYEQIDAVHKQLITPGGVEDTLNQFGESPSKARLYYCKGMLVGHL
IYQELRSEFRILSLWHLGRSILKFLVSDILHVMGNAIIHFPVHEPVIKQLLFDIFIRDFYHHRRVTFFKASATQIFENPM
VKHCFDGLLDLVLYRFHQVGNEFMQSRQEAH

Sequences:

>Translated_271_residues
MVNKLEFSHAVAAIRKERGLTQGQLADELARSYSAFESLNQPTLSQWESGKVTPSLLKRLAFSHYIGEQYQYTSSEYKRV
KTSQSKSIYLSFKDIVYQYQVTDVKSCSLSQISLSEYEQIDAVHKQLITPGGVEDTLNQFGESPSKARLYYCKGMLVGHL
IYQELRSEFRILSLWHLGRSILKFLVSDILHVMGNAIIHFPVHEPVIKQLLFDIFIRDFYHHRRVTFFKASATQIFENPM
VKHCFDGLLDLVLYRFHQVGNEFMQSRQEAH
>Mature_271_residues
MVNKLEFSHAVAAIRKERGLTQGQLADELARSYSAFESLNQPTLSQWESGKVTPSLLKRLAFSHYIGEQYQYTSSEYKRV
KTSQSKSIYLSFKDIVYQYQVTDVKSCSLSQISLSEYEQIDAVHKQLITPGGVEDTLNQFGESPSKARLYYCKGMLVGHL
IYQELRSEFRILSLWHLGRSILKFLVSDILHVMGNAIIHFPVHEPVIKQLLFDIFIRDFYHHRRVTFFKASATQIFENPM
VKHCFDGLLDLVLYRFHQVGNEFMQSRQEAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31438; Mature: 31438

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKLEFSHAVAAIRKERGLTQGQLADELARSYSAFESLNQPTLSQWESGKVTPSLLKRL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHH
AFSHYIGEQYQYTSSEYKRVKTSQSKSIYLSFKDIVYQYQVTDVKSCSLSQISLSEYEQI
HHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
DAVHKQLITPGGVEDTLNQFGESPSKARLYYCKGMLVGHLIYQELRSEFRILSLWHLGRS
HHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKFLVSDILHVMGNAIIHFPVHEPVIKQLLFDIFIRDFYHHRRVTFFKASATQIFENPM
HHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCHH
VKHCFDGLLDLVLYRFHQVGNEFMQSRQEAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVNKLEFSHAVAAIRKERGLTQGQLADELARSYSAFESLNQPTLSQWESGKVTPSLLKRL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHH
AFSHYIGEQYQYTSSEYKRVKTSQSKSIYLSFKDIVYQYQVTDVKSCSLSQISLSEYEQI
HHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
DAVHKQLITPGGVEDTLNQFGESPSKARLYYCKGMLVGHLIYQELRSEFRILSLWHLGRS
HHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKFLVSDILHVMGNAIIHFPVHEPVIKQLLFDIFIRDFYHHRRVTFFKASATQIFENPM
HHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCHH
VKHCFDGLLDLVLYRFHQVGNEFMQSRQEAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA