Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156977742

Identifier: 156977742

GI number: 156977742

Start: 1681714

End: 1682046

Strand: Reverse

Name: 156977742

Synonym: VIBHAR_06530

Alternate gene names: NA

Gene position: 1682046-1681714 (Counterclockwise)

Preceding gene: 156977747

Following gene: 156977738

Centisome position: 76.32

GC content: 42.64

Gene sequence:

>333_bases
ATGTTCATCTCAAGAGTTACAGAGTTCGTAACAAAATATTTCTGGATGAGTATTATACAACTGAGTGAGGGGGAGGGTGT
TAGCAATATTTACGCGAATACAGCAAGAGGCCACCGGAGTGACCTCTTTTTAATCGGATGGCGTATTAATTATCCAATCC
AGGTGATGAAGTACGGGATGATCAGTGCATTGGCTAAATCGATGAAAAATGCGCAGACCAAAGGCACGATGATAAAGGCT
TGGTGTGAATTACCATACTTTTTTGCGACCGCCGACATGTTTGCCATTGCCGTTGAAAACCGTACTTTTGTGGCCAATAG
AAAAGAGGAGTGA

Upstream 100 bases:

>100_bases
CATCTTGTACCACGATGCATGGACCGTCGAGCCAAAGAGAAAGAGTGTGCCAATTAAAAAGAGTGTGCCGATTGATAGGC
CAACCCATCTGCTGCTGTTC

Downstream 100 bases:

>100_bases
TATAAGGTTAAATAAGCTTTGTATCACTCCTCTTAGTTCGATGAAGAACTCGTTAGTTAAATAGCCAGTAACTTTCTGGA
TTATCAGGACATTGATAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MFISRVTEFVTKYFWMSIIQLSEGEGVSNIYANTARGHRSDLFLIGWRINYPIQVMKYGMISALAKSMKNAQTKGTMIKA
WCELPYFFATADMFAIAVENRTFVANRKEE

Sequences:

>Translated_110_residues
MFISRVTEFVTKYFWMSIIQLSEGEGVSNIYANTARGHRSDLFLIGWRINYPIQVMKYGMISALAKSMKNAQTKGTMIKA
WCELPYFFATADMFAIAVENRTFVANRKEE
>Mature_110_residues
MFISRVTEFVTKYFWMSIIQLSEGEGVSNIYANTARGHRSDLFLIGWRINYPIQVMKYGMISALAKSMKNAQTKGTMIKA
WCELPYFFATADMFAIAVENRTFVANRKEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12694; Mature: 12694

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISRVTEFVTKYFWMSIIQLSEGEGVSNIYANTARGHRSDLFLIGWRINYPIQVMKYGM
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHH
ISALAKSMKNAQTKGTMIKAWCELPYFFATADMFAIAVENRTFVANRKEE
HHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHEEEEEECCCEEECCCCCC
>Mature Secondary Structure
MFISRVTEFVTKYFWMSIIQLSEGEGVSNIYANTARGHRSDLFLIGWRINYPIQVMKYGM
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHH
ISALAKSMKNAQTKGTMIKAWCELPYFFATADMFAIAVENRTFVANRKEE
HHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHEEEEEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA