| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977740
Identifier: 156977740
GI number: 156977740
Start: 1681122
End: 1681661
Strand: Direct
Name: 156977740
Synonym: VIBHAR_06528
Alternate gene names: NA
Gene position: 1681122-1681661 (Clockwise)
Preceding gene: 156977739
Following gene: 156977741
Centisome position: 76.28
GC content: 44.63
Gene sequence:
>540_bases ATGAATAGAAACAATCTAGCTTTACTTAATACCTTTGGCCTACTTGGCATGACTGCCGTGCTGTTGATTGGTTTTGTGCT GCAATTTGTTCTGAATGAGCTGCCTTGCCCACTCTGTTTATTGCAACGTATCGGCTTCGTTATGATCATGTTTGGTTTCT TATTAAACGTGGTCTATGGCCCACAATCTCGACATTATGGTGTAGTGCTGATCGGTGCGTTATACGGTGTGGCAACTTCA TTGAGACAAGTTTCGTTGCACGTGATACCTGGTACGCCAGGTTACGGTAGCCCAATCTTTGGGATGCACTATTACACTTG GGCGTTTGTCTTGTTTGTTGCCACGATATTTGCGGTCGCAGTCATCCTCATGCTGACCAGCAGAGAAGAGTCACCAGAGC CTTATGAAATGAGCAATTTGGGACGTATCACATGCCTACTAGCGATCTCTGTCGTAGCACTTAATGTTATTGGCACGTTC GCGGAGTGTGGTCCTTATCAATGTCCTGATAATCCAGAAAGTTACTGGCTATTTAACTAA
Upstream 100 bases:
>100_bases GGGCTACGCCTTCTTTGCTTCCTCGGTGATCATTGGTCTGTATTGGTTCAATCATCACGCCACCGATCCTCTTTCAATAT TGCTATAAAGGGGGCTACAC
Downstream 100 bases:
>100_bases CGAGTTCTTCATCGAACTAAGAGGAGTGATACAAAGCTTATTTAACCTTATATCACTCCTCTTTTCTATTGGCCACAAAA GTACGGTTTTCAACGGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MNRNNLALLNTFGLLGMTAVLLIGFVLQFVLNELPCPLCLLQRIGFVMIMFGFLLNVVYGPQSRHYGVVLIGALYGVATS LRQVSLHVIPGTPGYGSPIFGMHYYTWAFVLFVATIFAVAVILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTF AECGPYQCPDNPESYWLFN
Sequences:
>Translated_179_residues MNRNNLALLNTFGLLGMTAVLLIGFVLQFVLNELPCPLCLLQRIGFVMIMFGFLLNVVYGPQSRHYGVVLIGALYGVATS LRQVSLHVIPGTPGYGSPIFGMHYYTWAFVLFVATIFAVAVILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTF AECGPYQCPDNPESYWLFN >Mature_179_residues MNRNNLALLNTFGLLGMTAVLLIGFVLQFVLNELPCPLCLLQRIGFVMIMFGFLLNVVYGPQSRHYGVVLIGALYGVATS LRQVSLHVIPGTPGYGSPIFGMHYYTWAFVLFVATIFAVAVILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTF AECGPYQCPDNPESYWLFN
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19750; Mature: 19750
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNNLALLNTFGLLGMTAVLLIGFVLQFVLNELPCPLCLLQRIGFVMIMFGFLLNVVYG CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC PQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTWAFVLFVATIFAVA CCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQCPDNPESYWLFN HHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC >Mature Secondary Structure MNRNNLALLNTFGLLGMTAVLLIGFVLQFVLNELPCPLCLLQRIGFVMIMFGFLLNVVYG CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC PQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTWAFVLFVATIFAVA CCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQCPDNPESYWLFN HHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA