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The map label for this gene is ydiA [C]

Identifier: 156977728

GI number: 156977728

Start: 1671128

End: 1671964

Strand: Reverse

Name: ydiA [C]

Synonym: VIBHAR_06516

Alternate gene names: 156977728

Gene position: 1671964-1671128 (Counterclockwise)

Preceding gene: 156977734

Following gene: 156977725

Centisome position: 75.86

GC content: 46.36

Gene sequence:

>837_bases
ATGCAAATAAATAGCCAAAGTCGTGATGTATTCTATGTTTCTGACGGAACGGCCATAACATGTGAGACATTAGGCCATGT
TGTTTTGGGTCAGTTTTCCCTCATTCCTAATGAAAAAACCTTCCCTTTTGTCGAAAGTGAAGACAAAGTTGCCGATGTCA
TCAAGGAAATCGAGATTTCCTACCAACGTGATGGGGTTAAGCCCTTGGTATTCTTCTCGATTGTTGTGCCAGAAATTCGT
GAAATGTTACTCAAAGCGCCAGCTCACGGTTATGACGTGCTGGAGAGCATTGTGCAGAAGGTACAAGACGACATTCAGAT
GGAGCCACAGCCGAAGATGCAGCGCTCACGCAGCGTAAGCAAAGATTCGGATACCTATTTCGACCGTATCGCTGCTATTG
AATACACGCTTGCTCACGATGATGGCATTACGCTTAAAGGCTTAGATGAAGCTAATATAATCCTCCTTGGCGTGTCACGC
AGTGGCAAAACACCGACCAGCCTGTACATGGCGATGCAATTTGGCTTACGTGTGGTGAACTACCCGTTTATCGCTGAAGA
CGTCAAGATGATGCGCTTATTGCCGGAGTTTGAGATTCATCGCCACAAGTTATTTGGTTTAACCATCAACCCAGAACGTT
TGAACGAGATCCGCGAGAACCGATTGTCAGGTAGCGAATACGCGAGCACTGAACAATGTAAGTTGGAGCTTGATACGGTA
GAAGCGCTGTTTAGACGGGAGGCAATCCCTTACATCAACACTTCGTCTTTGTCGGTGGAAGAGATCACCACGCGCATTCT
TGAAAGAGCAGGAATGAAGCGTCGCTTGTTTGGCTAA

Upstream 100 bases:

>100_bases
AGAATTTTCAAAGCTGTGGGGCACGCAATTGCAAGCCAAACTCATTTATTAATATTATGTAAACCATCCTACTCAAATGA
ATTTGAAAAAATAAACAAAA

Downstream 100 bases:

>100_bases
GTTGCCCTTGTTTGGCTAAGTTATCAATGCTCAAGCACAAAAGAGGAGATATCTGCGTCTCCTCTTTTTAACTAGCGGCT
AGCTTTTACTCATCGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MQINSQSRDVFYVSDGTAITCETLGHVVLGQFSLIPNEKTFPFVESEDKVADVIKEIEISYQRDGVKPLVFFSIVVPEIR
EMLLKAPAHGYDVLESIVQKVQDDIQMEPQPKMQRSRSVSKDSDTYFDRIAAIEYTLAHDDGITLKGLDEANIILLGVSR
SGKTPTSLYMAMQFGLRVVNYPFIAEDVKMMRLLPEFEIHRHKLFGLTINPERLNEIRENRLSGSEYASTEQCKLELDTV
EALFRREAIPYINTSSLSVEEITTRILERAGMKRRLFG

Sequences:

>Translated_278_residues
MQINSQSRDVFYVSDGTAITCETLGHVVLGQFSLIPNEKTFPFVESEDKVADVIKEIEISYQRDGVKPLVFFSIVVPEIR
EMLLKAPAHGYDVLESIVQKVQDDIQMEPQPKMQRSRSVSKDSDTYFDRIAAIEYTLAHDDGITLKGLDEANIILLGVSR
SGKTPTSLYMAMQFGLRVVNYPFIAEDVKMMRLLPEFEIHRHKLFGLTINPERLNEIRENRLSGSEYASTEQCKLELDTV
EALFRREAIPYINTSSLSVEEITTRILERAGMKRRLFG
>Mature_278_residues
MQINSQSRDVFYVSDGTAITCETLGHVVLGQFSLIPNEKTFPFVESEDKVADVIKEIEISYQRDGVKPLVFFSIVVPEIR
EMLLKAPAHGYDVLESIVQKVQDDIQMEPQPKMQRSRSVSKDSDTYFDRIAAIEYTLAHDDGITLKGLDEANIILLGVSR
SGKTPTSLYMAMQFGLRVVNYPFIAEDVKMMRLLPEFEIHRHKLFGLTINPERLNEIRENRLSGSEYASTEQCKLELDTV
EALFRREAIPYINTSSLSVEEITTRILERAGMKRRLFG

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=275, Percent_Identity=50.5454545454545, Blast_Score=297, Evalue=6e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 31687; Mature: 31687

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINSQSRDVFYVSDGTAITCETLGHVVLGQFSLIPNEKTFPFVESEDKVADVIKEIEIS
CCCCCCCCEEEEEECCCEEEHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHH
YQRDGVKPLVFFSIVVPEIREMLLKAPAHGYDVLESIVQKVQDDIQMEPQPKMQRSRSVS
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
KDSDTYFDRIAAIEYTLAHDDGITLKGLDEANIILLGVSRSGKTPTSLYMAMQFGLRVVN
CCCHHHHHHHHHHEEEEECCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
YPFIAEDVKMMRLLPEFEIHRHKLFGLTINPERLNEIRENRLSGSEYASTEQCKLELDTV
CCCHHHHHHHHHHCCHHHHCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCHHHEEEHHHH
EALFRREAIPYINTSSLSVEEITTRILERAGMKRRLFG
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MQINSQSRDVFYVSDGTAITCETLGHVVLGQFSLIPNEKTFPFVESEDKVADVIKEIEIS
CCCCCCCCEEEEEECCCEEEHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHH
YQRDGVKPLVFFSIVVPEIREMLLKAPAHGYDVLESIVQKVQDDIQMEPQPKMQRSRSVS
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
KDSDTYFDRIAAIEYTLAHDDGITLKGLDEANIILLGVSRSGKTPTSLYMAMQFGLRVVN
CCCHHHHHHHHHHEEEEECCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
YPFIAEDVKMMRLLPEFEIHRHKLFGLTINPERLNEIRENRLSGSEYASTEQCKLELDTV
CCCHHHHHHHHHHCCHHHHCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCHHHEEEHHHH
EALFRREAIPYINTSSLSVEEITTRILERAGMKRRLFG
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]