| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yaiL [H]
Identifier: 156977719
GI number: 156977719
Start: 1662069
End: 1662590
Strand: Direct
Name: yaiL [H]
Synonym: VIBHAR_06507
Alternate gene names: 156977719
Gene position: 1662069-1662590 (Clockwise)
Preceding gene: 156977716
Following gene: 156977724
Centisome position: 75.41
GC content: 43.87
Gene sequence:
>522_bases ATGGCAAAACTTACCCTTCAAGAGCAGATGCTAAAAGCAGGCTTGGTTAACGAGAAAAAACTGAAAAAAGCGAAAAAAGG CTCTAAAAAATCACGCGTTCAAGCTCGCGAAGTAAAGGCGGCGGTTGAAGAGAACAAACGTCAGCAGTTAGAGCGTGACA AGCAATTGAGCGAGCAACAAAATGCAGAACGCTTGAACAAAGAAATCAAAGCGCAAATCAACCAGCTGATTGAAATGAAC AAGGTTGATTTGAAAGATGGCGACATCAAATACAACTTCACACACGGTACACTTGTGAAGTCGCTTTACGTCGATTCAAT CGTCCGTGATCAATTGATCAAAGGTATCTTGGCGATTGCCATCGTCGGTGAGAGCTATTTAGTTATTCCTCGCCCTGTTG CAAACAAGATTGCTCAGCGTGACGAGTCTGTGATCATTGAACAGAAAGAGCCTGAGTCAGATATCCCAGCAGAAGATGAC CCATACGCAGATTTCGTCGTGCCAGACGATTTGATGTGGTAA
Upstream 100 bases:
>100_bases GTTTCAAGCAATCCAATGTAGATGAGAAAGGCACCAGCCCCTTTCTTTGCGACGAATGACTGGTTAAAATGCACAAAATT GCGCACTAACTGGATAGAAC
Downstream 100 bases:
>100_bases AGCGAGTTCGCAACAAAACTCGATAAGTAAGGTCAAGCTCCCGTCTGGTTTCACTCTTTGTAAACAGCAAAACCAAGATC ACGGTTGCTTGACCTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAKLTLQEQMLKAGLVNEKKLKKAKKGSKKSRVQAREVKAAVEENKRQQLERDKQLSEQQNAERLNKEIKAQINQLIEMN KVDLKDGDIKYNFTHGTLVKSLYVDSIVRDQLIKGILAIAIVGESYLVIPRPVANKIAQRDESVIIEQKEPESDIPAEDD PYADFVVPDDLMW
Sequences:
>Translated_173_residues MAKLTLQEQMLKAGLVNEKKLKKAKKGSKKSRVQAREVKAAVEENKRQQLERDKQLSEQQNAERLNKEIKAQINQLIEMN KVDLKDGDIKYNFTHGTLVKSLYVDSIVRDQLIKGILAIAIVGESYLVIPRPVANKIAQRDESVIIEQKEPESDIPAEDD PYADFVVPDDLMW >Mature_172_residues AKLTLQEQMLKAGLVNEKKLKKAKKGSKKSRVQAREVKAAVEENKRQQLERDKQLSEQQNAERLNKEIKAQINQLIEMNK VDLKDGDIKYNFTHGTLVKSLYVDSIVRDQLIKGILAIAIVGESYLVIPRPVANKIAQRDESVIIEQKEPESDIPAEDDP YADFVVPDDLMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=180, Percent_Identity=59.4444444444444, Blast_Score=202, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 19726; Mature: 19595
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLTLQEQMLKAGLVNEKKLKKAKKGSKKSRVQAREVKAAVEENKRQQLERDKQLSEQQ CCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAERLNKEIKAQINQLIEMNKVDLKDGDIKYNFTHGTLVKSLYVDSIVRDQLIKGILAIA HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IVGESYLVIPRPVANKIAQRDESVIIEQKEPESDIPAEDDPYADFVVPDDLMW HHCCCEEEECCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure AKLTLQEQMLKAGLVNEKKLKKAKKGSKKSRVQAREVKAAVEENKRQQLERDKQLSEQQ CCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAERLNKEIKAQINQLIEMNKVDLKDGDIKYNFTHGTLVKSLYVDSIVRDQLIKGILAIA HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IVGESYLVIPRPVANKIAQRDESVIIEQKEPESDIPAEDDPYADFVVPDDLMW HHCCCEEEECCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]