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The map label for this gene is pld [H]

Identifier: 156977713

GI number: 156977713

Start: 1653320

End: 1654024

Strand: Reverse

Name: pld [H]

Synonym: VIBHAR_06501

Alternate gene names: 156977713

Gene position: 1654024-1653320 (Counterclockwise)

Preceding gene: 156977714

Following gene: 156977712

Centisome position: 75.05

GC content: 48.94

Gene sequence:

>705_bases
ATGGATCGACAGAAATGGTCTGCGTGGCTAGAGGCTTCGATACAAGATTACCGCCTAGATGATAGTGAGCTAAGAGAGCT
CCAATCGGAGCTGCAGGACTCGGTATTAAGTCATGAAGACCGCGCCTACCTGCGTAATATGAGCTTCAAGCTCGTGCAGC
AAGAAATCCAAAATCAAGGTGATGCAGCCGCTTTAGTTCGCTGGTTAGAGCGCGTGGTCAAGGTTTTAGACAATGTCATG
AGTGAGAACTCGGCAGATACCGCGTTGAGTTGGTTTTCTCCAGGTAGAGCCTGTGCGTCCGGCATCATTGAACAGCTGAA
GCTGGCTCGTCACTCGGTGGACATTTGTGTTTTCACTATCGCGGATAACGACTTAACCGATCAGATCCTCGCCGCGCATA
AAAGAGGCGTGACGGTCCGAATCGTGACCGACAACGACAAAATGTACGATAAAGGCAGTGATGTGGAATACCTTGCAGCA
CAGGGCGTGGCGGTCAAAATTGATACGACTCGATACCACATGCACCATAAGTTCGCGATCTTCGACCAACAGCGGTTGAT
TAATGGCAGCTTTAACTGGACACGCAGCGCTTCTAAATACAATCAGGAAGATATCACGCTTACCGACGACCGCAGGTTTG
TTTCTGCGTTCTTAAGACAATTTGAAACGCTATGGCAGAAGTTTCCTTGCCATAAGCCGTCATAA

Upstream 100 bases:

>100_bases
GGGTGATTCCGAAGACCGAGCAGGACAGGTTGTGCAGCAACTTGCTATGTTGAATCAGCATGTTGCTCGATTTGGTCGTC
ATGATCAGGAGGGGAGCTAA

Downstream 100 bases:

>100_bases
ATATAGGGAGATCCCATGACCGAATTGATGAATTCTGAACATCAGGTACTTGAGGTGGACGCTACTCCTCAAATCGTCGC
ACTCGCAGAGCAATTTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: PLD; Choline phosphatase [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDRQKWSAWLEASIQDYRLDDSELRELQSELQDSVLSHEDRAYLRNMSFKLVQQEIQNQGDAAALVRWLERVVKVLDNVM
SENSADTALSWFSPGRACASGIIEQLKLARHSVDICVFTIADNDLTDQILAAHKRGVTVRIVTDNDKMYDKGSDVEYLAA
QGVAVKIDTTRYHMHHKFAIFDQQRLINGSFNWTRSASKYNQEDITLTDDRRFVSAFLRQFETLWQKFPCHKPS

Sequences:

>Translated_234_residues
MDRQKWSAWLEASIQDYRLDDSELRELQSELQDSVLSHEDRAYLRNMSFKLVQQEIQNQGDAAALVRWLERVVKVLDNVM
SENSADTALSWFSPGRACASGIIEQLKLARHSVDICVFTIADNDLTDQILAAHKRGVTVRIVTDNDKMYDKGSDVEYLAA
QGVAVKIDTTRYHMHHKFAIFDQQRLINGSFNWTRSASKYNQEDITLTDDRRFVSAFLRQFETLWQKFPCHKPS
>Mature_234_residues
MDRQKWSAWLEASIQDYRLDDSELRELQSELQDSVLSHEDRAYLRNMSFKLVQQEIQNQGDAAALVRWLERVVKVLDNVM
SENSADTALSWFSPGRACASGIIEQLKLARHSVDICVFTIADNDLTDQILAAHKRGVTVRIVTDNDKMYDKGSDVEYLAA
QGVAVKIDTTRYHMHHKFAIFDQQRLINGSFNWTRSASKYNQEDITLTDDRRFVSAFLRQFETLWQKFPCHKPS

Specific function: Could be a virulence factor [H]

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PLD phosphodiesterase domain [H]

Homologues:

Organism=Homo sapiens, GI270265812, Length=115, Percent_Identity=41.7391304347826, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI20129461, Length=147, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 27063; Mature: 27063

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQKWSAWLEASIQDYRLDDSELRELQSELQDSVLSHEDRAYLRNMSFKLVQQEIQNQG
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
DAAALVRWLERVVKVLDNVMSENSADTALSWFSPGRACASGIIEQLKLARHSVDICVFTI
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEEEEE
ADNDLTDQILAAHKRGVTVRIVTDNDKMYDKGSDVEYLAAQGVAVKIDTTRYHMHHKFAI
CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCEEEEEECCEEHHHHHEEE
FDQQRLINGSFNWTRSASKYNQEDITLTDDRRFVSAFLRQFETLWQKFPCHKPS
EHHHHHHCCCCCCCCCHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDRQKWSAWLEASIQDYRLDDSELRELQSELQDSVLSHEDRAYLRNMSFKLVQQEIQNQG
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
DAAALVRWLERVVKVLDNVMSENSADTALSWFSPGRACASGIIEQLKLARHSVDICVFTI
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEEEEE
ADNDLTDQILAAHKRGVTVRIVTDNDKMYDKGSDVEYLAAQGVAVKIDTTRYHMHHKFAI
CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCEEEEEECCEEHHHHHEEE
FDQQRLINGSFNWTRSASKYNQEDITLTDDRRFVSAFLRQFETLWQKFPCHKPS
EHHHHHHCCCCCCCCCHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]