Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977680

Identifier: 156977680

GI number: 156977680

Start: 1625978

End: 1626241

Strand: Reverse

Name: 156977680

Synonym: VIBHAR_06468

Alternate gene names: NA

Gene position: 1626241-1625978 (Counterclockwise)

Preceding gene: 156977681

Following gene: 156977679

Centisome position: 73.79

GC content: 42.42

Gene sequence:

>264_bases
ATGTACTCAGCCAAAGAGGTCTCTATCTTAGGTGAAAATCACTCATTAACTCATGAATTCCCAGAACATTTGGATACCAT
CACTCAACTGACGGCAAACGACAGCGCGTTTGCTGAAAATGCAAAAAACTACAACCAGCTCGACAAAGAAATCCGCGAAC
TCGAATTGCAAGGAAACCCAATCGACGACCATGAAATGAACACACTCAAACACAATAGAGCGGAGCTAAAAGACTGGCTC
TCCTCAAAAATTATGAGCGCATAA

Upstream 100 bases:

>100_bases
TGTGGGGATCCCTCAGGCTCAAATCGACAATTTCCCTTTGGCTGAAATGCTATGGTGGCTTTAAGCGTTGCTTAGGAATT
AAGCAGCATATTTAACTAAA

Downstream 100 bases:

>100_bases
TTTAACGGTTATGTTTCATGGATAGCGGCTCGATGATTCGAGCCGTTCTTGTATTTGGCCTCGATTACTTGATAAGAACG
GCTTAGTTAACTTATGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MYSAKEVSILGENHSLTHEFPEHLDTITQLTANDSAFAENAKNYNQLDKEIRELELQGNPIDDHEMNTLKHNRAELKDWL
SSKIMSA

Sequences:

>Translated_87_residues
MYSAKEVSILGENHSLTHEFPEHLDTITQLTANDSAFAENAKNYNQLDKEIRELELQGNPIDDHEMNTLKHNRAELKDWL
SSKIMSA
>Mature_87_residues
MYSAKEVSILGENHSLTHEFPEHLDTITQLTANDSAFAENAKNYNQLDKEIRELELQGNPIDDHEMNTLKHNRAELKDWL
SSKIMSA

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9982; Mature: 9982

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSAKEVSILGENHSLTHEFPEHLDTITQLTANDSAFAENAKNYNQLDKEIRELELQGNP
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCCC
IDDHEMNTLKHNRAELKDWLSSKIMSA
CCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYSAKEVSILGENHSLTHEFPEHLDTITQLTANDSAFAENAKNYNQLDKEIRELELQGNP
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCCC
IDDHEMNTLKHNRAELKDWLSSKIMSA
CCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA