| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977675
Identifier: 156977675
GI number: 156977675
Start: 1621041
End: 1622387
Strand: Direct
Name: 156977675
Synonym: VIBHAR_06463
Alternate gene names: NA
Gene position: 1621041-1622387 (Clockwise)
Preceding gene: 156977674
Following gene: 156977684
Centisome position: 73.55
GC content: 48.63
Gene sequence:
>1347_bases ATGAACTTAACACGACGTCGTTTTTTACAAGCAGGTTCCGCTGGTGTTGGGGTTTCTGCACTTAACCTTGCTGCTTTTCC TGCCTTTGCAGACTCTTTCAATCAGTGCAAAAACGGCTATCGCGCCGTAGTGGGCATCGACCTTGCGGGCGGCAACGATG GCTACAATATGCTGATCCCTACGGCCGCACCGGCGAACAGCCAGTATCGTGCACTGCGTGGCAGCTTAGCTTTGGATGAG ACGAGCTGTATTCATTTAGATGCGGTCAATGATGACGCCAAACTGGCATTAAACCCTGCCATGGCAGCGCTCAAGACCTA TTGGGATAATGCTAACCTTGTACCTGTTGTGAACCTAGGTCCACTGACACAGCGCGTGAATAATGTGATTTATGGTGAGA GTACTCGCCCCGCTCATTTGTTCAGCCACTCTCATCAATCCACTATGGTTCAGTCTCACGCGACTAAGTCTCTATCTAAA GAGGGCTTTGGTGCTAAGACTTCCACAGAGCTCGGCACTATGCTGCGCAGTCTAAATGAGCTGTCACCAATGTTTGATAT TGGCGGCACGCAAGTGTGGACCAACTGTATCGAGGCGCAATCTAACTCGGTCGGCTCTCAACCACCGAGCGATATTTTTA ATGACCAACGTTCGCGAGATCTGTTTGATCAACTGCAAAACACGGGCAGTTACGGTAATGTTTTTCAGTCTCATTATGCT GGTATTGCAGTGGATTCAACCAGAATGTATCAGGAGTTCAGCGCCATTTTGAATGCCGAGATTACTGAGGTATTCCCAGA AACACGCATCGGTAATCAATTAAAAGCGGTATTTAAGTTGCTGCTGCATAAAGATCAGTTCCAGCATCCTGCGCAGTACT TTAGTTGTAAGTTAGGTGGGTTCGATACGCACTCGGCTCAAATTAGCCGCCAAACGGGTTTGCTGCAAGAGTTGGCAGAA GCGATGGCCGCGTTCCAATTGGCTTTGGAAAACAATGGCTTGTTTGATCAGGTAACGACGTTCACCCATTCGGAATTTGG CCGTACTTTGATTCCAAACGGTACGGATGGTACGGATCACGGCTGGGCAAGCCACGCATTGGTGATGGGCGGCGGTGTAG CAGGAAAAGCGATCGTGGGTGAATATCCAGACTTATCTGAGACAAGCCCTTACTTGCTCTCGCGTGGGCGTGTGATTCCA ACCATCTCTTCCGATCAGCTTCATGCGAGTTTAATGGCATGGTTAGGGCTATCTGAAACGGGAATTAATCAATTATTCCC TGCGCTGGATAACACTTTGACAGATTCAATCCAACCTCAGACTCTCCCTCTGTTCAAATCTTGCTAA
Upstream 100 bases:
>100_bases CCCAGTGCCCAAGTCGCCAATCTAAATGGCGCAAAGAGATTAAGAATCTCGTTATGAACGCACTGCTTTCACCAGAATTC ATCACACAGGGGTAATCATC
Downstream 100 bases:
>100_bases TATAGAGGGAGAAATATAAGTGACTAAGTAATCTATTAATAGTCTACATGGTTACTAATAAGAAAAAGCAGTGCTAAACA AAAGGCTCCGTTCACGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MNLTRRRFLQAGSAGVGVSALNLAAFPAFADSFNQCKNGYRAVVGIDLAGGNDGYNMLIPTAAPANSQYRALRGSLALDE TSCIHLDAVNDDAKLALNPAMAALKTYWDNANLVPVVNLGPLTQRVNNVIYGESTRPAHLFSHSHQSTMVQSHATKSLSK EGFGAKTSTELGTMLRSLNELSPMFDIGGTQVWTNCIEAQSNSVGSQPPSDIFNDQRSRDLFDQLQNTGSYGNVFQSHYA GIAVDSTRMYQEFSAILNAEITEVFPETRIGNQLKAVFKLLLHKDQFQHPAQYFSCKLGGFDTHSAQISRQTGLLQELAE AMAAFQLALENNGLFDQVTTFTHSEFGRTLIPNGTDGTDHGWASHALVMGGGVAGKAIVGEYPDLSETSPYLLSRGRVIP TISSDQLHASLMAWLGLSETGINQLFPALDNTLTDSIQPQTLPLFKSC
Sequences:
>Translated_448_residues MNLTRRRFLQAGSAGVGVSALNLAAFPAFADSFNQCKNGYRAVVGIDLAGGNDGYNMLIPTAAPANSQYRALRGSLALDE TSCIHLDAVNDDAKLALNPAMAALKTYWDNANLVPVVNLGPLTQRVNNVIYGESTRPAHLFSHSHQSTMVQSHATKSLSK EGFGAKTSTELGTMLRSLNELSPMFDIGGTQVWTNCIEAQSNSVGSQPPSDIFNDQRSRDLFDQLQNTGSYGNVFQSHYA GIAVDSTRMYQEFSAILNAEITEVFPETRIGNQLKAVFKLLLHKDQFQHPAQYFSCKLGGFDTHSAQISRQTGLLQELAE AMAAFQLALENNGLFDQVTTFTHSEFGRTLIPNGTDGTDHGWASHALVMGGGVAGKAIVGEYPDLSETSPYLLSRGRVIP TISSDQLHASLMAWLGLSETGINQLFPALDNTLTDSIQPQTLPLFKSC >Mature_448_residues MNLTRRRFLQAGSAGVGVSALNLAAFPAFADSFNQCKNGYRAVVGIDLAGGNDGYNMLIPTAAPANSQYRALRGSLALDE TSCIHLDAVNDDAKLALNPAMAALKTYWDNANLVPVVNLGPLTQRVNNVIYGESTRPAHLFSHSHQSTMVQSHATKSLSK EGFGAKTSTELGTMLRSLNELSPMFDIGGTQVWTNCIEAQSNSVGSQPPSDIFNDQRSRDLFDQLQNTGSYGNVFQSHYA GIAVDSTRMYQEFSAILNAEITEVFPETRIGNQLKAVFKLLLHKDQFQHPAQYFSCKLGGFDTHSAQISRQTGLLQELAE AMAAFQLALENNGLFDQVTTFTHSEFGRTLIPNGTDGTDHGWASHALVMGGGVAGKAIVGEYPDLSETSPYLLSRGRVIP TISSDQLHASLMAWLGLSETGINQLFPALDNTLTDSIQPQTLPLFKSC
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48472; Mature: 48472
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTRRRFLQAGSAGVGVSALNLAAFPAFADSFNQCKNGYRAVVGIDLAGGNDGYNMLIP CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE TAAPANSQYRALRGSLALDETSCIHLDAVNDDAKLALNPAMAALKTYWDNANLVPVVNLG CCCCCCCHHHHHHCCCEECCCCEEEEEECCCCCCEEECHHHHHHHHHCCCCCEEEEECCC PLTQRVNNVIYGESTRPAHLFSHSHQSTMVQSHATKSLSKEGFGAKTSTELGTMLRSLNE HHHHHHHHCEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LSPMFDIGGTQVWTNCIEAQSNSVGSQPPSDIFNDQRSRDLFDQLQNTGSYGNVFQSHYA HCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCC GIAVDSTRMYQEFSAILNAEITEVFPETRIGNQLKAVFKLLLHKDQFQHPAQYFSCKLGG CEEECHHHHHHHHHHHHCCHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHEEECCC FDTHSAQISRQTGLLQELAEAMAAFQLALENNGLFDQVTTFTHSEFGRTLIPNGTDGTDH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCC GWASHALVMGGGVAGKAIVGEYPDLSETSPYLLSRGRVIPTISSDQLHASLMAWLGLSET CHHHCEEEECCCCCCCHHCCCCCCCCCCCCHHHHCCCEEECCCCHHHHHHHHHHHCCCCC GINQLFPALDNTLTDSIQPQTLPLFKSC CHHHHHHHHHHHHHCCCCCCCCCHHCCC >Mature Secondary Structure MNLTRRRFLQAGSAGVGVSALNLAAFPAFADSFNQCKNGYRAVVGIDLAGGNDGYNMLIP CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE TAAPANSQYRALRGSLALDETSCIHLDAVNDDAKLALNPAMAALKTYWDNANLVPVVNLG CCCCCCCHHHHHHCCCEECCCCEEEEEECCCCCCEEECHHHHHHHHHCCCCCEEEEECCC PLTQRVNNVIYGESTRPAHLFSHSHQSTMVQSHATKSLSKEGFGAKTSTELGTMLRSLNE HHHHHHHHCEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LSPMFDIGGTQVWTNCIEAQSNSVGSQPPSDIFNDQRSRDLFDQLQNTGSYGNVFQSHYA HCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCC GIAVDSTRMYQEFSAILNAEITEVFPETRIGNQLKAVFKLLLHKDQFQHPAQYFSCKLGG CEEECHHHHHHHHHHHHCCHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHEEECCC FDTHSAQISRQTGLLQELAEAMAAFQLALENNGLFDQVTTFTHSEFGRTLIPNGTDGTDH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCCCCC GWASHALVMGGGVAGKAIVGEYPDLSETSPYLLSRGRVIPTISSDQLHASLMAWLGLSET CHHHCEEEECCCCCCCHHCCCCCCCCCCCCHHHHCCCEEECCCCHHHHHHHHHHHCCCCC GINQLFPALDNTLTDSIQPQTLPLFKSC CHHHHHHHHHHHHHCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA