Click here to switch to the map view.

The map label for this gene is marR [C]

Identifier: 156977621

GI number: 156977621

Start: 1573718

End: 1574134

Strand: Reverse

Name: marR [C]

Synonym: VIBHAR_06409

Alternate gene names: 156977621

Gene position: 1574134-1573718 (Counterclockwise)

Preceding gene: 156977622

Following gene: 156977617

Centisome position: 71.42

GC content: 45.08

Gene sequence:

>417_bases
ATGCGCGAATTAGAAAAGCTGAATCAAACGCTTACCGAGTTCTATGACAAAATGTCTTCTTGGGAGCAATCTGTAGTAAA
AGGCACGGGTTATTCACTGGCTCAAATCCACACGATTGAAGTTTTAGGTGGGCATGGTGCGTTGCGTATGAAAGAACTGG
CGGAGAAGCTCGGTATTACAACAGGCACGTTAACGGTTCAAATTGAGAAACTGGTAAAAGCGGAGCTTATTGAGCGTTGT
CCGCATCCAGAAGATCGCCGCGCAATTGTAGTGAAGCTCACTCCTGCTGGTGAGGAGATTCACCGTCATCACAATCAGCT
GCATTTAGATTTGGTGCAAGACTTAACGCGTAATATCGACCCGGATCATCAGGCGATTTTGTTTGCTTGCTTACAGAAGA
TGAACAGAGAATTTTGA

Upstream 100 bases:

>100_bases
TTAAAAATCACAGTGACAAAACGCTGGATGATTTTAAGCAATTGTTGAGTAAATTTGATAAGATTCACCACCTAACTTTG
GAAGTTCAAACGACTGAGTG

Downstream 100 bases:

>100_bases
TTGCGCTTTTCGTTTCTACACTCAGATATTGAGTCTCGAATAGCAAAAAAGTAGAGCACCGAAATGCTCTACTTTTTTTA
TAAGCTCGATAGAATCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRELEKLNQTLTEFYDKMSSWEQSVVKGTGYSLAQIHTIEVLGGHGALRMKELAEKLGITTGTLTVQIEKLVKAELIERC
PHPEDRRAIVVKLTPAGEEIHRHHNQLHLDLVQDLTRNIDPDHQAILFACLQKMNREF

Sequences:

>Translated_138_residues
MRELEKLNQTLTEFYDKMSSWEQSVVKGTGYSLAQIHTIEVLGGHGALRMKELAEKLGITTGTLTVQIEKLVKAELIERC
PHPEDRRAIVVKLTPAGEEIHRHHNQLHLDLVQDLTRNIDPDHQAILFACLQKMNREF
>Mature_138_residues
MRELEKLNQTLTEFYDKMSSWEQSVVKGTGYSLAQIHTIEVLGGHGALRMKELAEKLGITTGTLTVQIEKLVKAELIERC
PHPEDRRAIVVKLTPAGEEIHRHHNQLHLDLVQDLTRNIDPDHQAILFACLQKMNREF

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15804; Mature: 15804

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50995 HTH_MARR_2 ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELEKLNQTLTEFYDKMSSWEQSVVKGTGYSLAQIHTIEVLGGHGALRMKELAEKLGIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCHHHHHHHHHHCCC
TGTLTVQIEKLVKAELIERCPHPEDRRAIVVKLTPAGEEIHRHHNQLHLDLVQDLTRNID
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
PDHQAILFACLQKMNREF
CCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRELEKLNQTLTEFYDKMSSWEQSVVKGTGYSLAQIHTIEVLGGHGALRMKELAEKLGIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCHHHHHHHHHHCCC
TGTLTVQIEKLVKAELIERCPHPEDRRAIVVKLTPAGEEIHRHHNQLHLDLVQDLTRNID
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
PDHQAILFACLQKMNREF
CCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA