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The map label for this gene is ugpE [H]

Identifier: 156977610

GI number: 156977610

Start: 1566862

End: 1567710

Strand: Direct

Name: ugpE [H]

Synonym: VIBHAR_06398

Alternate gene names: 156977610

Gene position: 1566862-1567710 (Clockwise)

Preceding gene: 156977609

Following gene: 156977611

Centisome position: 71.09

GC content: 46.29

Gene sequence:

>849_bases
ATGGTAGAAAGAAGACCGTTTTTTAATCTGTTTTGCCATGTCATTTTGACTCTTGGCATCATTTCGATTGCGCTTCCGGT
TTGGATTGCAATCGTAGCAACTACACACGAGAACAGCGCCTTCGCGACTGGCACACCGCTTTGGTTTGGTGAATTGGGAT
TTAGCGTATTCACTGACTTGTTGAGTAATGACACCCAGTACAACAACAATACGTTGCCGATTGGCAGCATGCTGCTGAAC
TCGTTCATTATGGCGATGTGCATCACCATCGGTAAGTTGAGCATTTCCATCATGTCTGCCTATGCAGTGGTGTTCTTCCG
TTTTCCGGGACGAATGCTGGCGTTCTGGATGATCTTCTTCACGCTGATGTTACCCGTTGAAGTTCGCATCATGCCGACAT
TTGAGGTGATTACGAACCTCAACATGCTCAACTCATTTTACGGCTTAACCATTCCGCTGATTGCCAGTGCGACAGCGACT
TTCTTGTTCCGTCAGTTCTTCTTAACGGTACCGAATGAGTTAGTGGAAGCAGCACGAATTGATGGCGCAGGACCGATCAA
GTTCTTCTTCGATATCTTGTTGCCTCTGTCGCGTACCAACATCGCAGCACTGTTCGTCATCACTTTCATTTACGGCTGGA
ACCAATATTTGTGGCCGCTTTTGATCACCACCGACGTGCAGTACTACACCATCGTGATGGGCATTAAACAGATGCTCGGA
GTGGTTGATGGTGTGATCGAATGGAACAAAATTATGGCCACCACCATTATCGCCATGTTGCCACCAGTAATTGTGGTAAT
TGCAATGCAAAAAGCCTTTGTTAAAGGTCTGGTAGATTCGGAGAAATAA

Upstream 100 bases:

>100_bases
ACTTAGGCTCATCGGCCGCGCAATCCGTCATCCTGATGATATTGGTCGCTTCCCTGACTGTGATTCAATTTAAGTATGTT
GAGAAGAAGGTAGCGTACTA

Downstream 100 bases:

>100_bases
ATGTCCACGTTAACTCTTTCAAATATCGCTAAATGTTATCCGAACGGCTATCAGGCGATCCAAAAACTCAATCTTGATAT
CTGCGACGGTGAAATGGTCG

Product: ABC-type sugar transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MVERRPFFNLFCHVILTLGIISIALPVWIAIVATTHENSAFATGTPLWFGELGFSVFTDLLSNDTQYNNNTLPIGSMLLN
SFIMAMCITIGKLSISIMSAYAVVFFRFPGRMLAFWMIFFTLMLPVEVRIMPTFEVITNLNMLNSFYGLTIPLIASATAT
FLFRQFFLTVPNELVEAARIDGAGPIKFFFDILLPLSRTNIAALFVITFIYGWNQYLWPLLITTDVQYYTIVMGIKQMLG
VVDGVIEWNKIMATTIIAMLPPVIVVIAMQKAFVKGLVDSEK

Sequences:

>Translated_282_residues
MVERRPFFNLFCHVILTLGIISIALPVWIAIVATTHENSAFATGTPLWFGELGFSVFTDLLSNDTQYNNNTLPIGSMLLN
SFIMAMCITIGKLSISIMSAYAVVFFRFPGRMLAFWMIFFTLMLPVEVRIMPTFEVITNLNMLNSFYGLTIPLIASATAT
FLFRQFFLTVPNELVEAARIDGAGPIKFFFDILLPLSRTNIAALFVITFIYGWNQYLWPLLITTDVQYYTIVMGIKQMLG
VVDGVIEWNKIMATTIIAMLPPVIVVIAMQKAFVKGLVDSEK
>Mature_282_residues
MVERRPFFNLFCHVILTLGIISIALPVWIAIVATTHENSAFATGTPLWFGELGFSVFTDLLSNDTQYNNNTLPIGSMLLN
SFIMAMCITIGKLSISIMSAYAVVFFRFPGRMLAFWMIFFTLMLPVEVRIMPTFEVITNLNMLNSFYGLTIPLIASATAT
FLFRQFFLTVPNELVEAARIDGAGPIKFFFDILLPLSRTNIAALFVITFIYGWNQYLWPLLITTDVQYYTIVMGIKQMLG
VVDGVIEWNKIMATTIIAMLPPVIVVIAMQKAFVKGLVDSEK

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=288, Percent_Identity=57.6388888888889, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI1787571, Length=183, Percent_Identity=28.4153005464481, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790464, Length=280, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31721; Mature: 31721

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERRPFFNLFCHVILTLGIISIALPVWIAIVATTHENSAFATGTPLWFGELGFSVFTDL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCHHHHHHHHHHHHHH
LSNDTQYNNNTLPIGSMLLNSFIMAMCITIGKLSISIMSAYAVVFFRFPGRMLAFWMIFF
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TLMLPVEVRIMPTFEVITNLNMLNSFYGLTIPLIASATATFLFRQFFLTVPNELVEAARI
HHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
DGAGPIKFFFDILLPLSRTNIAALFVITFIYGWNQYLWPLLITTDVQYYTIVMGIKQMLG
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
VVDGVIEWNKIMATTIIAMLPPVIVVIAMQKAFVKGLVDSEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVERRPFFNLFCHVILTLGIISIALPVWIAIVATTHENSAFATGTPLWFGELGFSVFTDL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCHHHHHHHHHHHHHH
LSNDTQYNNNTLPIGSMLLNSFIMAMCITIGKLSISIMSAYAVVFFRFPGRMLAFWMIFF
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TLMLPVEVRIMPTFEVITNLNMLNSFYGLTIPLIASATATFLFRQFFLTVPNELVEAARI
HHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
DGAGPIKFFFDILLPLSRTNIAALFVITFIYGWNQYLWPLLITTDVQYYTIVMGIKQMLG
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
VVDGVIEWNKIMATTIIAMLPPVIVVIAMQKAFVKGLVDSEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]