Click here to switch to the map view.

The map label for this gene is uspA [H]

Identifier: 156977604

GI number: 156977604

Start: 1560841

End: 1561272

Strand: Direct

Name: uspA [H]

Synonym: VIBHAR_06392

Alternate gene names: 156977604

Gene position: 1560841-1561272 (Clockwise)

Preceding gene: 156977602

Following gene: 156977605

Centisome position: 70.82

GC content: 44.21

Gene sequence:

>432_bases
ATGGTTATGAAATACAAACATATCCTAGTCGCACTGGAACTGTCTGATGAGAGTACTGTGTTGATTGACCGCGCTGTATC
TATGGCGAGTTATCTCGGCTCCGAGATATCATTTATCCATATCGACGGTACTCATGGTGAGATTTATCGTGAGCTTGTTG
ATATCAAAGCGGCCCCAGAGCAAAGACCGCTGAATGAGCACTCTATGGAGTGTTTGAGATCCTTCAGCGATTACATGGAG
CAACCGTTGAAGCACTTCTTTGTCGGCACCGGTGACTTGGCAGACAAGTTAGAAGTGACCATAAAAGAACAAGAAGTCGA
CCTACTGATTTGTGGTCACCACCAAGATTTCTGGAGCAAGATCATTTCTTACTCAAGACATTTGATCAACAAGTCTCCGG
TTGATATTTTGTTTGTGCCTATCCACGACTAG

Upstream 100 bases:

>100_bases
GATAATTTGCCAAAACTTTTTTGAGCAATTTCGGGATCTTAGCAACACATTTTTTCGCCAAGACATACTATGCTATTAGT
AACGTATTCCACAAAAGGGC

Downstream 100 bases:

>100_bases
GCTGAACAGACAGCGGAAAGTAACGACGCGAGAGATAGCCAAAAGATAATCGAAAGCCGCCTGTGATGGCTAACTCCGAT
CAGTTAAGCAAATGATCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MVMKYKHILVALELSDESTVLIDRAVSMASYLGSEISFIHIDGTHGEIYRELVDIKAAPEQRPLNEHSMECLRSFSDYME
QPLKHFFVGTGDLADKLEVTIKEQEVDLLICGHHQDFWSKIISYSRHLINKSPVDILFVPIHD

Sequences:

>Translated_143_residues
MVMKYKHILVALELSDESTVLIDRAVSMASYLGSEISFIHIDGTHGEIYRELVDIKAAPEQRPLNEHSMECLRSFSDYME
QPLKHFFVGTGDLADKLEVTIKEQEVDLLICGHHQDFWSKIISYSRHLINKSPVDILFVPIHD
>Mature_143_residues
MVMKYKHILVALELSDESTVLIDRAVSMASYLGSEISFIHIDGTHGEIYRELVDIKAAPEQRPLNEHSMECLRSFSDYME
QPLKHFFVGTGDLADKLEVTIKEQEVDLLICGHHQDFWSKIISYSRHLINKSPVDILFVPIHD

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1789909, Length=141, Percent_Identity=42.5531914893617, Blast_Score=127, Evalue=2e-31,
Organism=Escherichia coli, GI1790358, Length=141, Percent_Identity=28.3687943262411, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788205, Length=144, Percent_Identity=32.6388888888889, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: 1660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 290 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4003 Molecules/Cell In: Growth Phase, G

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16426; Mature: 16426

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMKYKHILVALELSDESTVLIDRAVSMASYLGSEISFIHIDGTHGEIYRELVDIKAAPE
CCEEEEEEEEEEEECCCCEEHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCC
QRPLNEHSMECLRSFSDYMEQPLKHFFVGTGDLADKLEVTIKEQEVDLLICGHHQDFWSK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCHHHHHH
IISYSRHLINKSPVDILFVPIHD
HHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MVMKYKHILVALELSDESTVLIDRAVSMASYLGSEISFIHIDGTHGEIYRELVDIKAAPE
CCEEEEEEEEEEEECCCCEEHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCC
QRPLNEHSMECLRSFSDYMEQPLKHFFVGTGDLADKLEVTIKEQEVDLLICGHHQDFWSK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCHHHHHH
IISYSRHLINKSPVDILFVPIHD
HHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]