Click here to switch to the map view.

The map label for this gene is ompP1 [H]

Identifier: 156977597

GI number: 156977597

Start: 1553903

End: 1554817

Strand: Reverse

Name: ompP1 [H]

Synonym: VIBHAR_06385

Alternate gene names: 156977597

Gene position: 1554817-1553903 (Counterclockwise)

Preceding gene: 156977598

Following gene: 156977596

Centisome position: 70.54

GC content: 48.2

Gene sequence:

>915_bases
ATGAAAAATCTTACCAAATTCGTTGCTTTGGGGTCCCTCCTCTCATGTGCAGCAGCGCAAGCAGGAGGTCTGTACTTGTA
CGAGACTTCCACTACTGATATCGGTTTGGCTTCTGCGGGCATGGCCGCAAGGGCGCAGGATGCTTCGGTCATGACGGCGA
ACCCCGCGGGTTTGTCTAACGTGGCAGGCCAGTCATTTTCCGGCCATCTGATCAGCTTGTATGGCGATACCATGCTAGAC
ACGGTTGGTGGCGGTGATGCAGGGAATATCATTGGCTACGTCCCGCTTGGTTCTGCATTTTATAGTCAACAGGTGAACGA
TAAGTGGACGCTTGGTATCGGTATGTATGGTAACTATGGATTAGGGTTGGAGTACGACAAGTTGTTTAATCGTATCGATA
TTCCTAATGCGATCACTCAAGCCTTGACCGTTCAGCCTTCTGCTTCTTACCGTATTAACGATCAATGGTCTGTAGGTGCG
GCATTGGGCATCCATTACGGCATTTTAGATATGGATGTGAAAGTTGACGGTACGACCATCGCTGGTGGTGTTGAAGATAC
AGACACCCAAGTTAATGGCCGCGTTGGTGTGCTGTATGAGTTGAATTCCGGCACTCGCTTAGGTCTGTCTTACTCGAATG
AAACTGAGTTCGAATTCGACGATAAAGACTTCTCGACCAGTGCTGTTGCGCCTCAGCAGTTGGTATTCAGTGCTTACCAT
GAGCTCAACGACAAACTGGCGGTGATGGGTAACTTGAACTGGCAAGATTGGAGCGCGTACCAAACGCTGATGGATGTAGA
AACACAAGACACCTATCAGGTTGCTTTGGGTACACAGTACAAGGTTAATAGCAAAATGATGTGGAATGCAGGTTTCGTAT
TTGACTTAAGCAAGTACCGTTTCTGTTGCCTTTGA

Upstream 100 bases:

>100_bases
TTAATCGTCTATCCCTAACTTATCCAACGTTTGTTTGCAGACCTTTATTTGATGGGGATTGGATAACGCATTCAGTTAGT
TCAAGTGGAATAAATATAAT

Downstream 100 bases:

>100_bases
AGCAATGCTTATTGAGTCGTCTGAAGTGAAAATGGCGGGTGTTCCTGTTGCAAGCTTTGATGATCCTGCCTTGTACTTCC
TGAGCATTGGCTACAGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: OMP P1 [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKNLTKFVALGSLLSCAAAQAGGLYLYETSTTDIGLASAGMAARAQDASVMTANPAGLSNVAGQSFSGHLISLYGDTMLD
TVGGGDAGNIIGYVPLGSAFYSQQVNDKWTLGIGMYGNYGLGLEYDKLFNRIDIPNAITQALTVQPSASYRINDQWSVGA
ALGIHYGILDMDVKVDGTTIAGGVEDTDTQVNGRVGVLYELNSGTRLGLSYSNETEFEFDDKDFSTSAVAPQQLVFSAYH
ELNDKLAVMGNLNWQDWSAYQTLMDVETQDTYQVALGTQYKVNSKMMWNAGFVFDLSKYRFCCL

Sequences:

>Translated_304_residues
MKNLTKFVALGSLLSCAAAQAGGLYLYETSTTDIGLASAGMAARAQDASVMTANPAGLSNVAGQSFSGHLISLYGDTMLD
TVGGGDAGNIIGYVPLGSAFYSQQVNDKWTLGIGMYGNYGLGLEYDKLFNRIDIPNAITQALTVQPSASYRINDQWSVGA
ALGIHYGILDMDVKVDGTTIAGGVEDTDTQVNGRVGVLYELNSGTRLGLSYSNETEFEFDDKDFSTSAVAPQQLVFSAYH
ELNDKLAVMGNLNWQDWSAYQTLMDVETQDTYQVALGTQYKVNSKMMWNAGFVFDLSKYRFCCL
>Mature_304_residues
MKNLTKFVALGSLLSCAAAQAGGLYLYETSTTDIGLASAGMAARAQDASVMTANPAGLSNVAGQSFSGHLISLYGDTMLD
TVGGGDAGNIIGYVPLGSAFYSQQVNDKWTLGIGMYGNYGLGLEYDKLFNRIDIPNAITQALTVQPSASYRINDQWSVGA
ALGIHYGILDMDVKVDGTTIAGGVEDTDTQVNGRVGVLYELNSGTRLGLSYSNETEFEFDDKDFSTSAVAPQQLVFSAYH
ELNDKLAVMGNLNWQDWSAYQTLMDVETQDTYQVALGTQYKVNSKMMWNAGFVFDLSKYRFCCL

Specific function: Involved In Translocation Of Long-Chain Fatty Acids Across The Outer Membrane. It Is A Receptor For The Bacteriophage T2. FADl May Form A Specific Channel. [C]

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ompP1/fadL family [H]

Homologues:

Organism=Escherichia coli, GI145693163, Length=367, Percent_Identity=21.7983651226158, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005017 [H]

Pfam domain/function: PF03349 Toluene_X [H]

EC number: NA

Molecular weight: Translated: 32781; Mature: 32781

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLTKFVALGSLLSCAAAQAGGLYLYETSTTDIGLASAGMAARAQDASVMTANPAGLSN
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCCCCCCEEEEECCCCCCH
VAGQSFSGHLISLYGDTMLDTVGGGDAGNIIGYVPLGSAFYSQQVNDKWTLGIGMYGNYG
HCCCCCCCCEEEEECCHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCEEEEEEECCCCCC
LGLEYDKLFNRIDIPNAITQALTVQPSASYRINDQWSVGAALGIHYGILDMDVKVDGTTI
CCCCHHHHHHHCCCCHHHHHHEEECCCCCEEECCCCCCCEEEEEEEEEEEEEEEECCEEE
AGGVEDTDTQVNGRVGVLYELNSGTRLGLSYSNETEFEFDDKDFSTSAVAPQQLVFSAYH
ECCCCCCCCEECCEEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHH
ELNDKLAVMGNLNWQDWSAYQTLMDVETQDTYQVALGTQYKVNSKMMWNAGFVFDLSKYR
HCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCEEEECCEEEECCCEEEEECCEE
FCCL
EECC
>Mature Secondary Structure
MKNLTKFVALGSLLSCAAAQAGGLYLYETSTTDIGLASAGMAARAQDASVMTANPAGLSN
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCCCCCCEEEEECCCCCCH
VAGQSFSGHLISLYGDTMLDTVGGGDAGNIIGYVPLGSAFYSQQVNDKWTLGIGMYGNYG
HCCCCCCCCEEEEECCHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCEEEEEEECCCCCC
LGLEYDKLFNRIDIPNAITQALTVQPSASYRINDQWSVGAALGIHYGILDMDVKVDGTTI
CCCCHHHHHHHCCCCHHHHHHEEECCCCCEEECCCCCCCEEEEEEEEEEEEEEEECCEEE
AGGVEDTDTQVNGRVGVLYELNSGTRLGLSYSNETEFEFDDKDFSTSAVAPQQLVFSAYH
ECCCCCCCCEECCEEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHH
ELNDKLAVMGNLNWQDWSAYQTLMDVETQDTYQVALGTQYKVNSKMMWNAGFVFDLSKYR
HCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCEEEECCEEEECCCEEEEECCEE
FCCL
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]