Click here to switch to the map view.

The map label for this gene is 156977576

Identifier: 156977576

GI number: 156977576

Start: 1535242

End: 1536633

Strand: Direct

Name: 156977576

Synonym: VIBHAR_06364

Alternate gene names: NA

Gene position: 1535242-1536633 (Clockwise)

Preceding gene: 156977575

Following gene: 156977577

Centisome position: 69.66

GC content: 48.78

Gene sequence:

>1392_bases
ATGGATATCAAACCATACCGCTTAGCTGCACCTATTTTTATGGTGGCTCTGGTCGCTGCGCCAACCTTGGTTAACGCAGC
AGGTAACGAGACGCACGCAGCGCAAAATTCCGCATCAAGTGAGCGAGCTTCAACGACCAAGCTTGCCCAACTGATCAACA
TCGCTTTAAGTAATGATGGCAATCGTAAGCAATACTCAGCGCAATCTGCTGCCATGCGTGAAACTGGCGTCGCGAGCGCG
ACCTTGATGGACCCAAAACTGAAAGTGGGTTTCGGTGGCTTGCCTGTCGACAGCTTCAAGTTCGATGAAGACCCAATGAC
CAACATCTCTGTTGGTTTAATGCAACAGTTTGAGCGTGGCTCAACGCTTGATTTACAACAGAAGAAAGCCAATCAACAAG
CCGACGGCCTTGGGCTTCAAGTGCATGCTCGTGAGCTTGAGGTAGCCAACAGCATGACTCAACTTTGGCTAGAGCTTGGC
TATCAGCAACAAGCTGAGCAAATCTTGCGAGAAAACCGTAAGTTGATGAAGGAAATGGAAATCTTTATTCAAACCAATTA
CTCGATTGGCAAGAGTGAAGCGCAAGACCTACTCAACGCGCAACTTCAAGTGAGTAAGCTAGACGAGAAACTGCAAGCCA
ATGCGCAGATGCAGCGACGACTTACCTCTCAGCTTTCGGAGTGGCTGGGTTCAGACTGGTTAGCGAACGATCAGGCTCTG
CATGCAAGTAATCAACTTAGCTGGGACACGCTGAACAGCAAACTTGCTTCCAGCATCGACTCCACCAAGCATTATCAGCA
ACTCAGCCAACACCCGATGGTTAAGATGGCCGACGTAAGTATTTCTGCTAATAAAACTCAGGTGGAAATTGCTGAGCAAG
CCTACAACCCACAATTTGGCGTCGAAGTAATGTACGCCTACCGCCAAGCCGACAACATGATGGGTGAACCCGCCTCTGAT
TTGGTCAGCGCTTACCTCACCATGGACATTCCACTGTTCACCGGTGACCGCCAAGATCGCAATCTTGCTGCCGCTCAATA
TCAAGTTGGCGCGGCACAATCGCAAAAAGACACCTTACTAACGCAGATGAATGCCAAAGTGAACACTTTGCTGGTTGATC
GCAGCAACTTAACCCAGCGTTTAGAACGTTATCAATCCACCTTATTACCTCAAGCGAAAGCGCGCATTCAAGCCGTTGAG
CGGGGTTATCAAAACAACACAGCGCAGTTTAACGATGTGATTTCTGCCACGACTGACGAGTTAGCACTGCAATTAGAGCA
ACAACGTCTGCTGACCGATCTCAATATCGTAAACAGCAATTTAGCCACCCTGCTCGGTGGTTTCGACTACCAAGTGGCTT
CACCAGAAGCTCGCTCTATTTCGACATATTAA

Upstream 100 bases:

>100_bases
AGGTTGTTTTAATGCGCCTGAACGACGAGGTTACAAGGCTTTACTGTTCCCGCAATAAAATCCGCACCTCCATCGATCCG
GCGAACACTGGATTTAGATT

Downstream 100 bases:

>100_bases
TTTGTGATTCCCCAAGACAGTTGGGGCTACAGCTAGGCGGCAAACGAGAGAATCCCATGAGCACTTTCCCTAACAAACTA
AGGGATCTGCTATGTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Cation Efflux Protein; Cation Efflux Protein; CzcC Family Heavy Metal RND Efflux Outer Membrane Protein; Cobalt-Zinc-Cadmium Resistance Outer Membrane Porin; Copper/Silver Resistance Outer Membrane Protein; Heavy Metal RND Efflux CzcC Family; Outer Membrane Silver Efflux Protein; Outer Membrane Protein lC; Outer Membrane Heavy Metal Efflux Protein; Heavy Metal RND Efflux Outer Membrane Protein CzcC Family; RND Family Metal Ion Efflux Pump Outer Membrane Protein

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MDIKPYRLAAPIFMVALVAAPTLVNAAGNETHAAQNSASSERASTTKLAQLINIALSNDGNRKQYSAQSAAMRETGVASA
TLMDPKLKVGFGGLPVDSFKFDEDPMTNISVGLMQQFERGSTLDLQQKKANQQADGLGLQVHARELEVANSMTQLWLELG
YQQQAEQILRENRKLMKEMEIFIQTNYSIGKSEAQDLLNAQLQVSKLDEKLQANAQMQRRLTSQLSEWLGSDWLANDQAL
HASNQLSWDTLNSKLASSIDSTKHYQQLSQHPMVKMADVSISANKTQVEIAEQAYNPQFGVEVMYAYRQADNMMGEPASD
LVSAYLTMDIPLFTGDRQDRNLAAAQYQVGAAQSQKDTLLTQMNAKVNTLLVDRSNLTQRLERYQSTLLPQAKARIQAVE
RGYQNNTAQFNDVISATTDELALQLEQQRLLTDLNIVNSNLATLLGGFDYQVASPEARSISTY

Sequences:

>Translated_463_residues
MDIKPYRLAAPIFMVALVAAPTLVNAAGNETHAAQNSASSERASTTKLAQLINIALSNDGNRKQYSAQSAAMRETGVASA
TLMDPKLKVGFGGLPVDSFKFDEDPMTNISVGLMQQFERGSTLDLQQKKANQQADGLGLQVHARELEVANSMTQLWLELG
YQQQAEQILRENRKLMKEMEIFIQTNYSIGKSEAQDLLNAQLQVSKLDEKLQANAQMQRRLTSQLSEWLGSDWLANDQAL
HASNQLSWDTLNSKLASSIDSTKHYQQLSQHPMVKMADVSISANKTQVEIAEQAYNPQFGVEVMYAYRQADNMMGEPASD
LVSAYLTMDIPLFTGDRQDRNLAAAQYQVGAAQSQKDTLLTQMNAKVNTLLVDRSNLTQRLERYQSTLLPQAKARIQAVE
RGYQNNTAQFNDVISATTDELALQLEQQRLLTDLNIVNSNLATLLGGFDYQVASPEARSISTY
>Mature_463_residues
MDIKPYRLAAPIFMVALVAAPTLVNAAGNETHAAQNSASSERASTTKLAQLINIALSNDGNRKQYSAQSAAMRETGVASA
TLMDPKLKVGFGGLPVDSFKFDEDPMTNISVGLMQQFERGSTLDLQQKKANQQADGLGLQVHARELEVANSMTQLWLELG
YQQQAEQILRENRKLMKEMEIFIQTNYSIGKSEAQDLLNAQLQVSKLDEKLQANAQMQRRLTSQLSEWLGSDWLANDQAL
HASNQLSWDTLNSKLASSIDSTKHYQQLSQHPMVKMADVSISANKTQVEIAEQAYNPQFGVEVMYAYRQADNMMGEPASD
LVSAYLTMDIPLFTGDRQDRNLAAAQYQVGAAQSQKDTLLTQMNAKVNTLLVDRSNLTQRLERYQSTLLPQAKARIQAVE
RGYQNNTAQFNDVISATTDELALQLEQQRLLTDLNIVNSNLATLLGGFDYQVASPEARSISTY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51325; Mature: 51325

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKPYRLAAPIFMVALVAAPTLVNAAGNETHAAQNSASSERASTTKLAQLINIALSNDG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
NRKQYSAQSAAMRETGVASATLMDPKLKVGFGGLPVDSFKFDEDPMTNISVGLMQQFERG
CCHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
STLDLQQKKANQQADGLGLQVHARELEVANSMTQLWLELGYQQQAEQILRENRKLMKEME
CCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IFIQTNYSIGKSEAQDLLNAQLQVSKLDEKLQANAQMQRRLTSQLSEWLGSDWLANDQAL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HASNQLSWDTLNSKLASSIDSTKHYQQLSQHPMVKMADVSISANKTQVEIAEQAYNPQFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCC
VEVMYAYRQADNMMGEPASDLVSAYLTMDIPLFTGDRQDRNLAAAQYQVGAAQSQKDTLL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHH
TQMNAKVNTLLVDRSNLTQRLERYQSTLLPQAKARIQAVERGYQNNTAQFNDVISATTDE
HHHCCCEEEEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LALQLEQQRLLTDLNIVNSNLATLLGGFDYQVASPEARSISTY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MDIKPYRLAAPIFMVALVAAPTLVNAAGNETHAAQNSASSERASTTKLAQLINIALSNDG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
NRKQYSAQSAAMRETGVASATLMDPKLKVGFGGLPVDSFKFDEDPMTNISVGLMQQFERG
CCHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
STLDLQQKKANQQADGLGLQVHARELEVANSMTQLWLELGYQQQAEQILRENRKLMKEME
CCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IFIQTNYSIGKSEAQDLLNAQLQVSKLDEKLQANAQMQRRLTSQLSEWLGSDWLANDQAL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HASNQLSWDTLNSKLASSIDSTKHYQQLSQHPMVKMADVSISANKTQVEIAEQAYNPQFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCC
VEVMYAYRQADNMMGEPASDLVSAYLTMDIPLFTGDRQDRNLAAAQYQVGAAQSQKDTLL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHH
TQMNAKVNTLLVDRSNLTQRLERYQSTLLPQAKARIQAVERGYQNNTAQFNDVISATTDE
HHHCCCEEEEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LALQLEQQRLLTDLNIVNSNLATLLGGFDYQVASPEARSISTY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA