| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is pgcA [H]
Identifier: 156977486
GI number: 156977486
Start: 1455074
End: 1456774
Strand: Direct
Name: pgcA [H]
Synonym: VIBHAR_06273
Alternate gene names: 156977486
Gene position: 1455074-1456774 (Clockwise)
Preceding gene: 156977480
Following gene: 156977487
Centisome position: 66.02
GC content: 48.5
Gene sequence:
>1701_bases ATGAATATGACAACACAAATTACTCAGTGGCTAGCACGAGACCCAGACCCTAAAACCCGCGAAGAGCTCCAGCACCTAGT CGATGCAAATAATGAACAAGAACTGACAGATCGATTCGGCTCACGTTTGGCTTTTGGTACTGCTGGTTTGCGTGGCAAAG TGGGCGCGGGCCCAAACCGAATGAACCGCTTGGTGATTCAAGAAACGGCTACTGGTCTCGGTCACTATCTGATTGAACAG GTGAAAGATGCTTCGTCTCGTGGTGTGGTTATCGGCTACGATGGTCGCCCTGACTCCAAACAATTCGCACACGATACTGC TTCAGTACTGACCGCCCTAAGCATCAAGGTTTACCTAACCTACAAGGTAGCGGCAACACCAATTGTTGCCTTCGGTGTTC GTGAGTTAAATGCGGCTGCGGCTGTCGTCGTGACAGCAAGCCATAACCCACCAGAGTACAATGGCTTTAAAGTCTACTGG GAAAATGGCGCACAAATCATTCCACCACACGATTCCGGAATTGCTGCAAGAATTGATGAGGCAACAACAAAACCGCTTCC TCTGATGTCACTGGACGATGCAAAACAAAAAGGTTTGTTAGTTTGGCTTGAAGACGAGTACTACCAAACATACCGCAAAA CAATGAACGACAATGCCCTGCTAACACCGGACAGCAACACAGATATCTCGATTGTTTACACGGCAATGCACGGTGTCGGT GCGGACATGGCAGAAACGTTGCTCGCAGATGCTGGCTTTGAAAAAGTGGCAAGTGTTTCGGAACAGCGTGAACCAGACGG CACGTTCCCTACCGTAAACTTCCCGAACCCTGAAGAAGCAGGCGCGATGGACATGGTGATGGCGCTAGGTAAATCTGTCG ATGCCGATATTGCCTGCGCAAACGACCCTGACGCAGACCGCTTTGCGGTGGCAGTAAAACGCCCAGATGGCGAATACCAA ATGCTGACGGGTGACCAAGTGGGTTCATTATTTGGTGATTACTTACTGCAAGGTCAACCAAACGCACTTGTTGGTAATAC CATTGTGTCTTCTCGCCTATTGAGCAGCATTGCTAAAGCACACGGAGCAGAATACTACCAAACGCTAACGGGCTTTAAAT GGCTAACCAACGTAGCAATGACGCAAGAGACCGAAGCAAATCCATTCCTATTCGCTTACGAAGAAGCGCTTGGCTACACC GTAGGTAATAAGGTATGGGATAAAGATGGTTTGTCAGCACTGGTCGCTTTCTCTCAATTGACAGGTAAGCTAAAAGCACA AGGCAAAACGCTTTGGGATAAGTTAGAAGAGTTATACCGCCAACACGGTTTCTACTTTAACGCACAGCGCAGCATTGCTC TTGATCCTAAATCACCACCAATCGGTGACAAGCTTCGCGCAAACCCACCGAAAGAGATCGCCGGTAAGCGTATTGAAGTG ATCGAAGATCTGAAGTCATCACTTCGCTTTGTAACCGATGGCCCAACAGAAGCAATCAACTTACCAGCGAGTGACGTACT GGTTTACCACCTGGAAGACAAATCACGTGTGATTGTTCGTCCTTCTGGTACTGAGCCTAAGTTGAAGTGTTACTACGAAG TGATCAGCGACTTCCCTGCAGCGATGGATTACGCGCAAGCTAACCAAGCAGCGGAAGCGAAGATGAATGCATTGATCGAA GCGCATCAACAAAGTTTGTAA
Upstream 100 bases:
>100_bases GAAATGTAATTGAGAACCATTTACATTGTAAAAAAGAAAACATTGGGACACTTTCCGTATAAAAGTGTCTAAACAAGTAG GCTCCCCCTGCTAAGGAAAG
Downstream 100 bases:
>100_bases TCCAAGCTTGAAGCATAGACTCTGTGACAACAGTAGATAGAAAAAGAGGCGCATCGAGCGCCTCTCTTTTCTATTCAAAA AGAATCAAACTATCTGTTTT
Product: phosphomannomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MNMTTQITQWLARDPDPKTREELQHLVDANNEQELTDRFGSRLAFGTAGLRGKVGAGPNRMNRLVIQETATGLGHYLIEQ VKDASSRGVVIGYDGRPDSKQFAHDTASVLTALSIKVYLTYKVAATPIVAFGVRELNAAAAVVVTASHNPPEYNGFKVYW ENGAQIIPPHDSGIAARIDEATTKPLPLMSLDDAKQKGLLVWLEDEYYQTYRKTMNDNALLTPDSNTDISIVYTAMHGVG ADMAETLLADAGFEKVASVSEQREPDGTFPTVNFPNPEEAGAMDMVMALGKSVDADIACANDPDADRFAVAVKRPDGEYQ MLTGDQVGSLFGDYLLQGQPNALVGNTIVSSRLLSSIAKAHGAEYYQTLTGFKWLTNVAMTQETEANPFLFAYEEALGYT VGNKVWDKDGLSALVAFSQLTGKLKAQGKTLWDKLEELYRQHGFYFNAQRSIALDPKSPPIGDKLRANPPKEIAGKRIEV IEDLKSSLRFVTDGPTEAINLPASDVLVYHLEDKSRVIVRPSGTEPKLKCYYEVISDFPAAMDYAQANQAAEAKMNALIE AHQQSL
Sequences:
>Translated_566_residues MNMTTQITQWLARDPDPKTREELQHLVDANNEQELTDRFGSRLAFGTAGLRGKVGAGPNRMNRLVIQETATGLGHYLIEQ VKDASSRGVVIGYDGRPDSKQFAHDTASVLTALSIKVYLTYKVAATPIVAFGVRELNAAAAVVVTASHNPPEYNGFKVYW ENGAQIIPPHDSGIAARIDEATTKPLPLMSLDDAKQKGLLVWLEDEYYQTYRKTMNDNALLTPDSNTDISIVYTAMHGVG ADMAETLLADAGFEKVASVSEQREPDGTFPTVNFPNPEEAGAMDMVMALGKSVDADIACANDPDADRFAVAVKRPDGEYQ MLTGDQVGSLFGDYLLQGQPNALVGNTIVSSRLLSSIAKAHGAEYYQTLTGFKWLTNVAMTQETEANPFLFAYEEALGYT VGNKVWDKDGLSALVAFSQLTGKLKAQGKTLWDKLEELYRQHGFYFNAQRSIALDPKSPPIGDKLRANPPKEIAGKRIEV IEDLKSSLRFVTDGPTEAINLPASDVLVYHLEDKSRVIVRPSGTEPKLKCYYEVISDFPAAMDYAQANQAAEAKMNALIE AHQQSL >Mature_566_residues MNMTTQITQWLARDPDPKTREELQHLVDANNEQELTDRFGSRLAFGTAGLRGKVGAGPNRMNRLVIQETATGLGHYLIEQ VKDASSRGVVIGYDGRPDSKQFAHDTASVLTALSIKVYLTYKVAATPIVAFGVRELNAAAAVVVTASHNPPEYNGFKVYW ENGAQIIPPHDSGIAARIDEATTKPLPLMSLDDAKQKGLLVWLEDEYYQTYRKTMNDNALLTPDSNTDISIVYTAMHGVG ADMAETLLADAGFEKVASVSEQREPDGTFPTVNFPNPEEAGAMDMVMALGKSVDADIACANDPDADRFAVAVKRPDGEYQ MLTGDQVGSLFGDYLLQGQPNALVGNTIVSSRLLSSIAKAHGAEYYQTLTGFKWLTNVAMTQETEANPFLFAYEEALGYT VGNKVWDKDGLSALVAFSQLTGKLKAQGKTLWDKLEELYRQHGFYFNAQRSIALDPKSPPIGDKLRANPPKEIAGKRIEV IEDLKSSLRFVTDGPTEAINLPASDVLVYHLEDKSRVIVRPSGTEPKLKCYYEVISDFPAAMDYAQANQAAEAKMNALIE AHQQSL
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=596, Percent_Identity=33.7248322147651, Blast_Score=317, Evalue=2e-86, Organism=Homo sapiens, GI31377548, Length=602, Percent_Identity=32.890365448505, Blast_Score=306, Evalue=4e-83, Organism=Caenorhabditis elegans, GI71993870, Length=556, Percent_Identity=36.1510791366906, Blast_Score=313, Evalue=1e-85, Organism=Caenorhabditis elegans, GI71993878, Length=319, Percent_Identity=37.9310344827586, Blast_Score=206, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6323934, Length=579, Percent_Identity=36.2694300518135, Blast_Score=306, Evalue=6e-84, Organism=Drosophila melanogaster, GI20129809, Length=591, Percent_Identity=36.0406091370558, Blast_Score=333, Evalue=1e-91, Organism=Drosophila melanogaster, GI24651977, Length=480, Percent_Identity=38.5416666666667, Blast_Score=316, Evalue=3e-86, Organism=Drosophila melanogaster, GI24653722, Length=597, Percent_Identity=30.6532663316583, Blast_Score=263, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 61952; Mature: 61952
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMTTQITQWLARDPDPKTREELQHLVDANNEQELTDRFGSRLAFGTAGLRGKVGAGPNR CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHH MNRLVIQETATGLGHYLIEQVKDASSRGVVIGYDGRPDSKQFAHDTASVLTALSIKVYLT HHEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEE YKVAATPIVAFGVRELNAAAAVVVTASHNPPEYNGFKVYWENGAQIIPPHDSGIAARIDE EEEHHCCHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEECCCEEECCCCCCCEEEECC ATTKPLPLMSLDDAKQKGLLVWLEDEYYQTYRKTMNDNALLTPDSNTDISIVYTAMHGVG CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEHHCCC ADMAETLLADAGFEKVASVSEQREPDGTFPTVNFPNPEEAGAMDMVMALGKSVDADIACA HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEC NDPDADRFAVAVKRPDGEYQMLTGDQVGSLFGDYLLQGQPNALVGNTIVSSRLLSSIAKA CCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHH HGAEYYQTLTGFKWLTNVAMTQETEANPFLFAYEEALGYTVGNKVWDKDGLSALVAFSQL HCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCHHHCCCCCCCCHHHHHHHHHHH TGKLKAQGKTLWDKLEELYRQHGFYFNAQRSIALDPKSPPIGDKLRANPPKEIAGKRIEV HHHHHHCCHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCHHHHCCHHHH IEDLKSSLRFVTDGPTEAINLPASDVLVYHLEDKSRVIVRPSGTEPKLKCYYEVISDFPA HHHHHHHCEEEECCCCCEECCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCHH AMDYAQANQAAEAKMNALIEAHQQSL HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNMTTQITQWLARDPDPKTREELQHLVDANNEQELTDRFGSRLAFGTAGLRGKVGAGPNR CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHH MNRLVIQETATGLGHYLIEQVKDASSRGVVIGYDGRPDSKQFAHDTASVLTALSIKVYLT HHEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEE YKVAATPIVAFGVRELNAAAAVVVTASHNPPEYNGFKVYWENGAQIIPPHDSGIAARIDE EEEHHCCHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEECCCEEECCCCCCCEEEECC ATTKPLPLMSLDDAKQKGLLVWLEDEYYQTYRKTMNDNALLTPDSNTDISIVYTAMHGVG CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEHHCCC ADMAETLLADAGFEKVASVSEQREPDGTFPTVNFPNPEEAGAMDMVMALGKSVDADIACA HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEC NDPDADRFAVAVKRPDGEYQMLTGDQVGSLFGDYLLQGQPNALVGNTIVSSRLLSSIAKA CCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHH HGAEYYQTLTGFKWLTNVAMTQETEANPFLFAYEEALGYTVGNKVWDKDGLSALVAFSQL HCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCHHHCCCCCCCCHHHHHHHHHHH TGKLKAQGKTLWDKLEELYRQHGFYFNAQRSIALDPKSPPIGDKLRANPPKEIAGKRIEV HHHHHHCCHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCHHHHCCHHHH IEDLKSSLRFVTDGPTEAINLPASDVLVYHLEDKSRVIVRPSGTEPKLKCYYEVISDFPA HHHHHHHCEEEECCCCCEECCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCHH AMDYAQANQAAEAKMNALIEAHQQSL HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]