| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is luxC [H]
Identifier: 156977457
GI number: 156977457
Start: 1424774
End: 1426207
Strand: Reverse
Name: luxC [H]
Synonym: VIBHAR_06244
Alternate gene names: 156977457
Gene position: 1426207-1424774 (Counterclockwise)
Preceding gene: 156977464
Following gene: 156977456
Centisome position: 64.71
GC content: 38.77
Gene sequence:
>1434_bases ATGGAAAAACACTTACCTTTAATAATAAATGGGCAAATAGTTTTTACTGAAGAAAATCGATTTGAGATCAGTTTTGAAGA AAAAAAAGTTAAGATTGATTCCTTTAATCATGTTCATTTAACTCAGATGGTGACTCATGATTATTTAAATGATATAAATA TAAATAACATCATCAATTTTCTTTATACAACAGGGCAGCGTTGGAAGAGCGAAGAGTATTCAAGAAGAAGGGCATATATT CGGTCTCTTGTTACTTATTTGGGGTATTCACCACAAATGGCGAAACTCGAAGCAAATTGGATTGCAATGATCCTTTGCTC TAAGAGTGCGCTCTACGACATTATTGATACCGAACTTGGCTCTACGCATATACAAGATGAATGGTTACCGCAGGGTGAGT GTTATGTGAGGGCTTTTCCTAAAGGACGCACGATGCATTTGCTTGCGGGGAATGTTCCTCTCTCCGGTGTGACCTCAATA CTACGAGGCATACTGACGAGAAACCAATGTATTGTGAGAATGTCAGCATCGGATCCATTTACTGCCCATGCGCTAGCGAT GAGCTTTATTGACGTCGATCCCAACCATCCTATTTCTCGTTCTATTTCCGTATTGTATTGGCCTCATGCATCGGATACGA CACTCGCTGAAGAGTTACTCAATCATATGGATGCAGTGGTTGCTTGGGGGGGGCGAGATGCCATTGATTGGGCGGTTAAG CATTCTCCTTCACACATCGATGTTTTGAAGTTTGGTCCAAAGAAGAGTTTTACCGTGTTAGACCATCCAGCCGATCTAGA AGAAGCCGCCTCGGGTGTTGCTCATGATATTTGCTTTTATGACCAAAATGCCTGCTTTTCTACTCAGAATATTTACTTTT CTGGAGATAATTATGAAGAATTTAAATCGAAACTTGTTGAAAAACTGAATCTTTATCAAGAAGTTTTACCAAAATCAAAG CAAAATTTTGATGATGAAGCTTTATTTTCTATGACTCGTCTTGAGTGTCAATTTTCTGGGTTGAAAGTGATATCAGAACC GGAAAATAACTGGATGATCATCGATTCAGAACCGGGGGTTGAATATAACCATCCATTAAGTCGCTGCGTTTATGTCCACA AAATAAATAAAGTTGATGATGTTGTTCAATATATAGAGAAACATCAAACACAAACGATTTCTTTTTATCCATGGGAGTCT TCCAAGAAATATCGAGATGCATTCGCCGCAAAAGGAGTAGAAAGAATCGTTGAATCTGGAATGAATAACATATTTAGAGT CGGTGGTGCACATGATGCCATGCGACCACTTCAACGTTTAGTTCGATTTGTTTCTCATGAAAGACCATATCACTTCACCA CTAAGGATGTATCTGTCGAAATAGAGCAAACCCGCTTTCTCGAAGAAGATAAATTCTTGGTTTTCGTCCCTTAA
Upstream 100 bases:
>100_bases TTGATCTGCTTAATAAATCTGGTTAAAAGTTATTAATTAACTTTAAAAAAATAACCCAAGATACTAGTGTTTTTTCAAAT TCAAAGGAGAAGCTCTTGAT
Downstream 100 bases:
>100_bases ACAAGGAAATTCACAATGAGTAATCAATGCAAGACTATTGCACACGTGTTGCCCGTGAACAATGGTCAGGAAATTCACGT TTGGGAAACGCCCCCAAAAG
Product: fatty acid reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MEKHLPLIINGQIVFTEENRFEISFEEKKVKIDSFNHVHLTQMVTHDYLNDININNIINFLYTTGQRWKSEEYSRRRAYI RSLVTYLGYSPQMAKLEANWIAMILCSKSALYDIIDTELGSTHIQDEWLPQGECYVRAFPKGRTMHLLAGNVPLSGVTSI LRGILTRNQCIVRMSASDPFTAHALAMSFIDVDPNHPISRSISVLYWPHASDTTLAEELLNHMDAVVAWGGRDAIDWAVK HSPSHIDVLKFGPKKSFTVLDHPADLEEAASGVAHDICFYDQNACFSTQNIYFSGDNYEEFKSKLVEKLNLYQEVLPKSK QNFDDEALFSMTRLECQFSGLKVISEPENNWMIIDSEPGVEYNHPLSRCVYVHKINKVDDVVQYIEKHQTQTISFYPWES SKKYRDAFAAKGVERIVESGMNNIFRVGGAHDAMRPLQRLVRFVSHERPYHFTTKDVSVEIEQTRFLEEDKFLVFVP
Sequences:
>Translated_477_residues MEKHLPLIINGQIVFTEENRFEISFEEKKVKIDSFNHVHLTQMVTHDYLNDININNIINFLYTTGQRWKSEEYSRRRAYI RSLVTYLGYSPQMAKLEANWIAMILCSKSALYDIIDTELGSTHIQDEWLPQGECYVRAFPKGRTMHLLAGNVPLSGVTSI LRGILTRNQCIVRMSASDPFTAHALAMSFIDVDPNHPISRSISVLYWPHASDTTLAEELLNHMDAVVAWGGRDAIDWAVK HSPSHIDVLKFGPKKSFTVLDHPADLEEAASGVAHDICFYDQNACFSTQNIYFSGDNYEEFKSKLVEKLNLYQEVLPKSK QNFDDEALFSMTRLECQFSGLKVISEPENNWMIIDSEPGVEYNHPLSRCVYVHKINKVDDVVQYIEKHQTQTISFYPWES SKKYRDAFAAKGVERIVESGMNNIFRVGGAHDAMRPLQRLVRFVSHERPYHFTTKDVSVEIEQTRFLEEDKFLVFVP >Mature_477_residues MEKHLPLIINGQIVFTEENRFEISFEEKKVKIDSFNHVHLTQMVTHDYLNDININNIINFLYTTGQRWKSEEYSRRRAYI RSLVTYLGYSPQMAKLEANWIAMILCSKSALYDIIDTELGSTHIQDEWLPQGECYVRAFPKGRTMHLLAGNVPLSGVTSI LRGILTRNQCIVRMSASDPFTAHALAMSFIDVDPNHPISRSISVLYWPHASDTTLAEELLNHMDAVVAWGGRDAIDWAVK HSPSHIDVLKFGPKKSFTVLDHPADLEEAASGVAHDICFYDQNACFSTQNIYFSGDNYEEFKSKLVEKLNLYQEVLPKSK QNFDDEALFSMTRLECQFSGLKVISEPENNWMIIDSEPGVEYNHPLSRCVYVHKINKVDDVVQYIEKHQTQTISFYPWES SKKYRDAFAAKGVERIVESGMNNIFRVGGAHDAMRPLQRLVRFVSHERPYHFTTKDVSVEIEQTRFLEEDKFLVFVP
Specific function: LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the luxC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016162 - InterPro: IPR008670 [H]
Pfam domain/function: PF05893 LuxC [H]
EC number: =1.2.1.50 [H]
Molecular weight: Translated: 54934; Mature: 54934
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKHLPLIINGQIVFTEENRFEISFEEKKVKIDSFNHVHLTQMVTHDYLNDININNIINF CCCCCCEEECCEEEEEECCEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHH LYTTGQRWKSEEYSRRRAYIRSLVTYLGYSPQMAKLEANWIAMILCSKSALYDIIDTELG HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCHHHHHHHHCCCC STHIQDEWLPQGECYVRAFPKGRTMHLLAGNVPLSGVTSILRGILTRNQCIVRMSASDPF CCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC TAHALAMSFIDVDPNHPISRSISVLYWPHASDTTLAEELLNHMDAVVAWGGRDAIDWAVK HHHHHHHHEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHH HSPSHIDVLKFGPKKSFTVLDHPADLEEAASGVAHDICFYDQNACFSTQNIYFSGDNYEE CCCCEEEEEEECCCCCEEEECCCCCHHHHHCCHHHHHEEECCCCCEEECEEEECCCCHHH FKSKLVEKLNLYQEVLPKSKQNFDDEALFSMTRLECQFSGLKVISEPENNWMIIDSEPGV HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEECCCEEEECCCCCEEEEECCCCC EYNHPLSRCVYVHKINKVDDVVQYIEKHQTQTISFYPWESSKKYRDAFAAKGVERIVESG CCCCCHHHEEEEHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC MNNIFRVGGAHDAMRPLQRLVRFVSHERPYHFTTKDVSVEIEQTRFLEEDKFLVFVP CHHEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHHCCCCCCEEEEEC >Mature Secondary Structure MEKHLPLIINGQIVFTEENRFEISFEEKKVKIDSFNHVHLTQMVTHDYLNDININNIINF CCCCCCEEECCEEEEEECCEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHH LYTTGQRWKSEEYSRRRAYIRSLVTYLGYSPQMAKLEANWIAMILCSKSALYDIIDTELG HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCHHHHHHHHCCCC STHIQDEWLPQGECYVRAFPKGRTMHLLAGNVPLSGVTSILRGILTRNQCIVRMSASDPF CCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC TAHALAMSFIDVDPNHPISRSISVLYWPHASDTTLAEELLNHMDAVVAWGGRDAIDWAVK HHHHHHHHEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHH HSPSHIDVLKFGPKKSFTVLDHPADLEEAASGVAHDICFYDQNACFSTQNIYFSGDNYEE CCCCEEEEEEECCCCCEEEECCCCCHHHHHCCHHHHHEEECCCCCEEECEEEECCCCHHH FKSKLVEKLNLYQEVLPKSKQNFDDEALFSMTRLECQFSGLKVISEPENNWMIIDSEPGV HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEECCCEEEECCCCCEEEEECCCCC EYNHPLSRCVYVHKINKVDDVVQYIEKHQTQTISFYPWESSKKYRDAFAAKGVERIVESG CCCCCHHHEEEEHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC MNNIFRVGGAHDAMRPLQRLVRFVSHERPYHFTTKDVSVEIEQTRFLEEDKFLVFVP CHHEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3347497 [H]