| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977365
Identifier: 156977365
GI number: 156977365
Start: 1330674
End: 1331312
Strand: Direct
Name: 156977365
Synonym: VIBHAR_06151
Alternate gene names: NA
Gene position: 1330674-1331312 (Clockwise)
Preceding gene: 156977364
Following gene: 156977366
Centisome position: 60.37
GC content: 41.16
Gene sequence:
>639_bases ATGAAAAAGCTATTATTATTGATATGGACATCGTTGGCGGTTTCGCCTTTTGCCTTTGCTCATCATTCAGGTAAAGCGAC GGAAACGAAAGCCACTAAACAACTTGTTGAAAAGACATATAAAGAAGCCAAGTTGGAAGGCGTCATTGACTTCAGTTTAT TCAATGATGCGTTCTTAGCTTATAAGAAAACCTCAGATCGCAAAAAGCCACTTTTGACCATCATCGATTACAGTAAACCA TCTACTGAAAAACGCTTTTATGTGGTCGATTTGGACAAGAAGAAGCTCATTTTTAATACTTATGTCTCTCACGGCGTAAA CAGCGGCAAGAAGACCGCAACGAAGTTTTCTAATGTTGTGAACTCTCGTAAAACTTCTCTAGGAACATTCTTAACCGATA CCACATACTATGGTTCTAACGGTTATTCACTTCGCTTGGATGGACTGACATCCGGCGTTAACGATAAAGCACGAGAGCGT TACATCGTGGTTCATGGTGCAGACTACGCGAATCCTTCTTTTATTAAGAAGAATGGTTATCTTGGTCGCAGTTGGGGTTG CCCCGCTCTACCACAGAAACTATCACGAGAAATCATCGACACCATTAAAGGTGGCAGTGTTATTTACGCTAGCGCTTAA
Upstream 100 bases:
>100_bases GGCAGCATTGAGAATAGAATTAAATTGATGTACATGCTGTATTAGTGACTGCACAAAGCAATCACTAAATTTGTTGCACC AAGAGTTTTATTTAGTACAA
Downstream 100 bases:
>100_bases GGTTTCTTGACCTAATGTTGAAAAGGGAGCTAATACGCCTGTCTCTTATACACAAATCCCCAAGCTTGTAGCTTGGGGAT TTTTTTTGAACTCTTTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKKLLLLIWTSLAVSPFAFAHHSGKATETKATKQLVEKTYKEAKLEGVIDFSLFNDAFLAYKKTSDRKKPLLTIIDYSKP STEKRFYVVDLDKKKLIFNTYVSHGVNSGKKTATKFSNVVNSRKTSLGTFLTDTTYYGSNGYSLRLDGLTSGVNDKARER YIVVHGADYANPSFIKKNGYLGRSWGCPALPQKLSREIIDTIKGGSVIYASA
Sequences:
>Translated_212_residues MKKLLLLIWTSLAVSPFAFAHHSGKATETKATKQLVEKTYKEAKLEGVIDFSLFNDAFLAYKKTSDRKKPLLTIIDYSKP STEKRFYVVDLDKKKLIFNTYVSHGVNSGKKTATKFSNVVNSRKTSLGTFLTDTTYYGSNGYSLRLDGLTSGVNDKARER YIVVHGADYANPSFIKKNGYLGRSWGCPALPQKLSREIIDTIKGGSVIYASA >Mature_212_residues MKKLLLLIWTSLAVSPFAFAHHSGKATETKATKQLVEKTYKEAKLEGVIDFSLFNDAFLAYKKTSDRKKPLLTIIDYSKP STEKRFYVVDLDKKKLIFNTYVSHGVNSGKKTATKFSNVVNSRKTSLGTFLTDTTYYGSNGYSLRLDGLTSGVNDKARER YIVVHGADYANPSFIKKNGYLGRSWGCPALPQKLSREIIDTIKGGSVIYASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23614; Mature: 23614
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLLIWTSLAVSPFAFAHHSGKATETKATKQLVEKTYKEAKLEGVIDFSLFNDAFLA CCHHEEEHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEHHCCCCEE YKKTSDRKKPLLTIIDYSKPSTEKRFYVVDLDKKKLIFNTYVSHGVNSGKKTATKFSNVV EECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHH NSRKTSLGTFLTDTTYYGSNGYSLRLDGLTSGVNDKARERYIVVHGADYANPSFIKKNGY HHHHHHHHHEEECCEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCC LGRSWGCPALPQKLSREIIDTIKGGSVIYASA CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure MKKLLLLIWTSLAVSPFAFAHHSGKATETKATKQLVEKTYKEAKLEGVIDFSLFNDAFLA CCHHEEEHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEHHCCCCEE YKKTSDRKKPLLTIIDYSKPSTEKRFYVVDLDKKKLIFNTYVSHGVNSGKKTATKFSNVV EECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHH NSRKTSLGTFLTDTTYYGSNGYSLRLDGLTSGVNDKARERYIVVHGADYANPSFIKKNGY HHHHHHHHHEEECCEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCC LGRSWGCPALPQKLSREIIDTIKGGSVIYASA CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA