Click here to switch to the map view.

The map label for this gene is yclQ [H]

Identifier: 156977349

GI number: 156977349

Start: 1314941

End: 1315849

Strand: Reverse

Name: yclQ [H]

Synonym: VIBHAR_06135

Alternate gene names: 156977349

Gene position: 1315849-1314941 (Counterclockwise)

Preceding gene: 156977351

Following gene: 156977348

Centisome position: 59.7

GC content: 42.24

Gene sequence:

>909_bases
ATGGAAAAACTCGTCAGTGCGGCAATTCTTTCGCTGCTTATAATTTCACCTTCTTTTGCTGCAACCGTCAAAATTGACCA
TTACATGGGAACGACAGAAGTTGAACAATCCCCCAAACGAGTGGTTGTGATTGGCTTTGGTCCACTCGATATGCTGGATA
GTTTTGGCATCGATCCAGTAGCGGTATCGAACGCCTCCCATCTTCCAAAGTACTTATCTAAATACAGCAAGACTCATTAC
ACATCGGCAGGTAGTCTTTTCGAACCAGACTTTGAAACCATCTACATGCAAAAGCCGGACTTGATTTTGGTTGGTCCTCG
AGGTTCGTCAAAATACGATGAGTTAAGTGAAATAGCACCAACAGTTGTGCTCGCATCAGGTGAAAACGAAGGCTACTGGC
AGGGCACAAAAGCGCAATGGCGCAACGTTGGCAAGATCTTCAATATGGAAGAAAAGGTTGAACAAAAAATTGAAAACCTG
GATGCACAGTTCAAGGCGATTCGTGATTACAACCAAACCAACAATAATGATGCACTCACAATTCTAAGCATTGGTGACAA
CATCAGTGCATTTGGTGCGAAATCTCGTTTTGGCGCAATTTACACGGATTTTGGCTTTGCAGAGACTGTGAAGAATCTCA
AAACGGGTACACATGGTGACGTCATTTCTTATGAGTTTATTCGTGAAGCTAACCCGAAAAACATCCTCGTTATTGATAGA
AACGCACTTCACGCAAAGTCTGACAATGACTTTGCTAAATCGCTGGATAACGATTTGGTTAAAGCGACTTCGGCATACAA
GAATAAGAAAATTACCTTCCTAGATGTTGATGCTTGGTACTTAGCTATGTCTGGTGTGACTGCAACGGAAAAGATGGTGA
GTGAAATTAAACACACGATCGAACTTTAA

Upstream 100 bases:

>100_bases
GTGTAACGAATGTAAAGTTATCGAATAATTGGTTGAATGCCTGTTTGAGTAAGGATATATTGCGAATGCGCATGATAACG
GATCTCATTAAGGCTTAAAA

Downstream 100 bases:

>100_bases
GCCAAGCTAGCAGAGGTTAACTTTGAAAAAGTTATTGCTTGTTCTTGTTGCTCTAAGCGTCGCATCGTTGTTTGTTGGGG
TGGGAATTATGACACCCCAG

Product: ABC-type enterochelin transport system periplasmic protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEKLVSAAILSLLIISPSFAATVKIDHYMGTTEVEQSPKRVVVIGFGPLDMLDSFGIDPVAVSNASHLPKYLSKYSKTHY
TSAGSLFEPDFETIYMQKPDLILVGPRGSSKYDELSEIAPTVVLASGENEGYWQGTKAQWRNVGKIFNMEEKVEQKIENL
DAQFKAIRDYNQTNNNDALTILSIGDNISAFGAKSRFGAIYTDFGFAETVKNLKTGTHGDVISYEFIREANPKNILVIDR
NALHAKSDNDFAKSLDNDLVKATSAYKNKKITFLDVDAWYLAMSGVTATEKMVSEIKHTIEL

Sequences:

>Translated_302_residues
MEKLVSAAILSLLIISPSFAATVKIDHYMGTTEVEQSPKRVVVIGFGPLDMLDSFGIDPVAVSNASHLPKYLSKYSKTHY
TSAGSLFEPDFETIYMQKPDLILVGPRGSSKYDELSEIAPTVVLASGENEGYWQGTKAQWRNVGKIFNMEEKVEQKIENL
DAQFKAIRDYNQTNNNDALTILSIGDNISAFGAKSRFGAIYTDFGFAETVKNLKTGTHGDVISYEFIREANPKNILVIDR
NALHAKSDNDFAKSLDNDLVKATSAYKNKKITFLDVDAWYLAMSGVTATEKMVSEIKHTIEL
>Mature_302_residues
MEKLVSAAILSLLIISPSFAATVKIDHYMGTTEVEQSPKRVVVIGFGPLDMLDSFGIDPVAVSNASHLPKYLSKYSKTHY
TSAGSLFEPDFETIYMQKPDLILVGPRGSSKYDELSEIAPTVVLASGENEGYWQGTKAQWRNVGKIFNMEEKVEQKIENL
DAQFKAIRDYNQTNNNDALTILSIGDNISAFGAKSRFGAIYTDFGFAETVKNLKTGTHGDVISYEFIREANPKNILVIDR
NALHAKSDNDFAKSLDNDLVKATSAYKNKKITFLDVDAWYLAMSGVTATEKMVSEIKHTIEL

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=296, Percent_Identity=25.3378378378378, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33471; Mature: 33471

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLVSAAILSLLIISPSFAATVKIDHYMGTTEVEQSPKRVVVIGFGPLDMLDSFGIDPV
CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCHHHHHHCCCCCE
AVSNASHLPKYLSKYSKTHYTSAGSLFEPDFETIYMQKPDLILVGPRGSSKYDELSEIAP
EECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCHHHHHHHCC
TVVLASGENEGYWQGTKAQWRNVGKIFNMEEKVEQKIENLDAQFKAIRDYNQTNNNDALT
EEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
ILSIGDNISAFGAKSRFGAIYTDFGFAETVKNLKTGTHGDVISYEFIREANPKNILVIDR
EEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCEEEHHHHHCCCCCEEEEECC
NALHAKSDNDFAKSLDNDLVKATSAYKNKKITFLDVDAWYLAMSGVTATEKMVSEIKHTI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEEHHCCCHHHHHHHHHHHHHH
EL
CC
>Mature Secondary Structure
MEKLVSAAILSLLIISPSFAATVKIDHYMGTTEVEQSPKRVVVIGFGPLDMLDSFGIDPV
CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCHHHHHHCCCCCE
AVSNASHLPKYLSKYSKTHYTSAGSLFEPDFETIYMQKPDLILVGPRGSSKYDELSEIAP
EECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCHHHHHHHCC
TVVLASGENEGYWQGTKAQWRNVGKIFNMEEKVEQKIENLDAQFKAIRDYNQTNNNDALT
EEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
ILSIGDNISAFGAKSRFGAIYTDFGFAETVKNLKTGTHGDVISYEFIREANPKNILVIDR
EEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCEEEHHHHHCCCCCEEEEECC
NALHAKSDNDFAKSLDNDLVKATSAYKNKKITFLDVDAWYLAMSGVTATEKMVSEIKHTI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEEHHCCCHHHHHHHHHHHHHH
EL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]