Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977277

Identifier: 156977277

GI number: 156977277

Start: 1234778

End: 1235827

Strand: Reverse

Name: 156977277

Synonym: VIBHAR_06063

Alternate gene names: NA

Gene position: 1235827-1234778 (Counterclockwise)

Preceding gene: 156977278

Following gene: 156977276

Centisome position: 56.07

GC content: 42.0

Gene sequence:

>1050_bases
ATGTCACATAGAGTTCTCGTGATAGGTGGTTACTACGACCAGATTAATACGTTGGTTGAGAAAGGTTTTACAGTCGTAGC
ACTCTTGCCAATTGGTCGATACAAGGAAATGGTCCCACGAGCAGAAGTGAAAACCTACTTCGTTAATGTGACTGATAAAG
AACAGTGTCAAGTTATAGCGACGAAAGAACATAAACATAATAGATTTAGTGCTGTAATGAGTCATTACGAGCTATCAATT
CCTATTGCAGCAAATGTGGTATCTTTTCTTGGTATACCAGGTCCTTGTAGGCATGCAGCACAAATTATTCGTGACAAAAC
TCGCACGCGAGAACTTGCTAATCGTTGTAGCGATGTTGATGCTCCTTACGATATTGTCGTAAATAAAGAGCAGGTCTTAG
AGTTTATATCTGAGTTTGGATCTTCTGTGATCAAGCCCTCTGCTGGGGTTGGAGGACGTGACATTCAGCTTATACGAACT
CCGGTTGATATTGATTATTATTTAAGTGGAATTGACCTTAAGAGTGAAACGTTTCAGATCGAACAGTTTATCGAAGGCTT
CGAGTTTAGTGTAGAAGGCTTTATGGATTTAGGTGGCCACACCATAGTGGCAGTGACAGGCAAGTCGCAACCTCGTTCGC
CCACGTTTGTAGAAACCACACATGTGCAATCTAAGACTATAGAGGCATGGTGTTCAAATGAGCTCAAGCTAAGGATAAAT
ATACTTCTAGAAGAATTTTATCGTTATGTGGGTTATCAATTGGGAGCAACACACTCCGAATTCATTTTGACACCAGAAGG
GAAATTGTACTTATTGGAGGGACACCTACGAACAGGGGGCTTTTCTATATGGGAATTGACTAGGATAACGACTGGCGTTG
ACCTCTTTCTTCATCATACATTACGTCTATTGGGGAAGGATACAGTGCTAACTGTACAAGAATCGGAGCATTCTGCGACC
ATTACCGGGTTATCGTGTCAGCCAGGTAGGGTGCATAACGTTTCATTCGAAATAGACCCAAAAGATGGCTTACCAGCGCC
TACTAGGTAA

Upstream 100 bases:

>100_bases
TTATCTGTACAACAGATTACCTCTACGCTCGTAGTTTTACTGATTACCGCAGGGTTTTTGTTGAATATCGTTATTTTGAA
GCAGAGAAAGGAAATGGCTA

Downstream 100 bases:

>100_bases
GCGCTCCATAAAACCCGCATTCTAATCGCCTAGCGCGAAGAATAAGATCAAGTCTCCAACCATGAGGAGATTTGAAATGG
GAAAACGACACACTAATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Argininosuccinate Lyase; Carbamoyl-Phosphate Synthase Large Chain; Carboxylase

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSHRVLVIGGYYDQINTLVEKGFTVVALLPIGRYKEMVPRAEVKTYFVNVTDKEQCQVIATKEHKHNRFSAVMSHYELSI
PIAANVVSFLGIPGPCRHAAQIIRDKTRTRELANRCSDVDAPYDIVVNKEQVLEFISEFGSSVIKPSAGVGGRDIQLIRT
PVDIDYYLSGIDLKSETFQIEQFIEGFEFSVEGFMDLGGHTIVAVTGKSQPRSPTFVETTHVQSKTIEAWCSNELKLRIN
ILLEEFYRYVGYQLGATHSEFILTPEGKLYLLEGHLRTGGFSIWELTRITTGVDLFLHHTLRLLGKDTVLTVQESEHSAT
ITGLSCQPGRVHNVSFEIDPKDGLPAPTR

Sequences:

>Translated_349_residues
MSHRVLVIGGYYDQINTLVEKGFTVVALLPIGRYKEMVPRAEVKTYFVNVTDKEQCQVIATKEHKHNRFSAVMSHYELSI
PIAANVVSFLGIPGPCRHAAQIIRDKTRTRELANRCSDVDAPYDIVVNKEQVLEFISEFGSSVIKPSAGVGGRDIQLIRT
PVDIDYYLSGIDLKSETFQIEQFIEGFEFSVEGFMDLGGHTIVAVTGKSQPRSPTFVETTHVQSKTIEAWCSNELKLRIN
ILLEEFYRYVGYQLGATHSEFILTPEGKLYLLEGHLRTGGFSIWELTRITTGVDLFLHHTLRLLGKDTVLTVQESEHSAT
ITGLSCQPGRVHNVSFEIDPKDGLPAPTR
>Mature_348_residues
SHRVLVIGGYYDQINTLVEKGFTVVALLPIGRYKEMVPRAEVKTYFVNVTDKEQCQVIATKEHKHNRFSAVMSHYELSIP
IAANVVSFLGIPGPCRHAAQIIRDKTRTRELANRCSDVDAPYDIVVNKEQVLEFISEFGSSVIKPSAGVGGRDIQLIRTP
VDIDYYLSGIDLKSETFQIEQFIEGFEFSVEGFMDLGGHTIVAVTGKSQPRSPTFVETTHVQSKTIEAWCSNELKLRINI
LLEEFYRYVGYQLGATHSEFILTPEGKLYLLEGHLRTGGFSIWELTRITTGVDLFLHHTLRLLGKDTVLTVQESEHSATI
TGLSCQPGRVHNVSFEIDPKDGLPAPTR

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39101; Mature: 38970

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRVLVIGGYYDQINTLVEKGFTVVALLPIGRYKEMVPRAEVKTYFVNVTDKEQCQVIA
CCCEEEEEECCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEEEEECCCCCCEEEEE
TKEHKHNRFSAVMSHYELSIPIAANVVSFLGIPGPCRHAAQIIRDKTRTRELANRCSDVD
ECCCCCHHHHHHHHHHEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
APYDIVVNKEQVLEFISEFGSSVIKPSAGVGGRDIQLIRTPVDIDYYLSGIDLKSETFQI
CCEEEEECHHHHHHHHHHHCHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHH
EQFIEGFEFSVEGFMDLGGHTIVAVTGKSQPRSPTFVETTHVQSKTIEAWCSNELKLRIN
HHHHCCCCEEEHHHEECCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCEEEEHH
ILLEEFYRYVGYQLGATHSEFILTPEGKLYLLEGHLRTGGFSIWELTRITTGVDLFLHHT
HHHHHHHHHHCEECCCCCCCEEECCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHH
LRLLGKDTVLTVQESEHSATITGLSCQPGRVHNVSFEIDPKDGLPAPTR
HHHHCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SHRVLVIGGYYDQINTLVEKGFTVVALLPIGRYKEMVPRAEVKTYFVNVTDKEQCQVIA
CCEEEEEECCHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEEEEECCCCCCEEEEE
TKEHKHNRFSAVMSHYELSIPIAANVVSFLGIPGPCRHAAQIIRDKTRTRELANRCSDVD
ECCCCCHHHHHHHHHHEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
APYDIVVNKEQVLEFISEFGSSVIKPSAGVGGRDIQLIRTPVDIDYYLSGIDLKSETFQI
CCEEEEECHHHHHHHHHHHCHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHH
EQFIEGFEFSVEGFMDLGGHTIVAVTGKSQPRSPTFVETTHVQSKTIEAWCSNELKLRIN
HHHHCCCCEEEHHHEECCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCEEEEHH
ILLEEFYRYVGYQLGATHSEFILTPEGKLYLLEGHLRTGGFSIWELTRITTGVDLFLHHT
HHHHHHHHHHCEECCCCCCCEEECCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHH
LRLLGKDTVLTVQESEHSATITGLSCQPGRVHNVSFEIDPKDGLPAPTR
HHHHCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA