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The map label for this gene is 156977272

Identifier: 156977272

GI number: 156977272

Start: 1231791

End: 1233323

Strand: Reverse

Name: 156977272

Synonym: VIBHAR_06058

Alternate gene names: NA

Gene position: 1233323-1231791 (Counterclockwise)

Preceding gene: 156977273

Following gene: 156977270

Centisome position: 55.96

GC content: 49.64

Gene sequence:

>1533_bases
ATGGCAAAAAAGAGAACTCCAATGAATAAAATCAAAGAGGTATTACGCCTTAAGTACGACTGCGGTCTCTCAAACCGCAG
CATCGCTTCCTGCCTTAAACTCGGCCCTTCCACCATATCGGAACTCCTGACTCGCTTTAAACAAAGCCAACTTGGCTGGC
CTCTGCCAGAAGGTTGCAGTGATGCAGACCTCACTAAGGCTCTGTATCACTCGAAGAAAGCCAGTCGCGACAAAGTCATG
CCAGACTTCACTCAATACGCTGTCGAACTCAGGCGTAAAGGCATGACGAAGATGCTGTTGTGGCAGGAATATCATGAGCA
ATATCAAGAGCAAGCTTACGCTTACACTCAGTTCTGCGAGCACTTCACTCGCTGGTTCAAAACCCAAAAACGCAGTATGC
GTCAGCTTCATGTTGCGGGAGATAAGCTGTTTATCGATTACTGTGGGCCTCGGCTTCAGGTGGTCAATCCTGACACAGGA
GAAGTGCGCGAAGCGGAGGTGTTCGTGGCGACCTTAGGTGCGTCCAATTACACCTATGTTGAAGCCTTCCCTAGCCAAGG
TAAGTCCTACTGGTTAGAGGCGCATGCTAATGCGTTCGAACACTTCGGCGGCGTACCACAACTCTTAGTTCCCGATAATC
TTCGCAGCGCGGTCACCAAAGCTAACCGTTATGAGCCAAGACTTAACGACAGCTATCAAAAGCTGGCGAACCACTATCAA
ACAGCAGTGATGCCAGCTCGCCCCTATAAACCGAAAGACAAAGCCAAAGCAGAGAATGCTGTGCTCCTGGTGGAACGCTG
GATCATGATGCGGCTGCGACACCAAACCTTCCATACCTTCAAAGAACTGAACCTAGCCATCCGTGAGCTTATGAATGACT
TAAACGAACGTAAGATGAAACAGTATGGTGCGAGTCGTAAAGCGCTGTTCGACAAGCTCGATAAACCCGCGTTAAAGCCT
CTGCCTAAGCAGCGTTACCTGTATACCGAAACCAAGCGAGCCAAAGTGGGGCCTGACTATCACATCGAATATCGCCGTCA
TTACTACTCGGTTCCCCATCAACTTGTTGGTCACCATGTCGAACTGGAAGCCTCTAACCGTCTGGTGCAGATCTACCATA
AAGGTAACTTGGTCGCCCAGCATCCACTCAGCCAAAGAGAACGTGGAAACAGCACCCAACCAGAGCATATGCCGAGTAAT
CATCAACATCAAAAGTGGTCGCCTGGACGCTTGCTCAACTGGGGAGCCAATATCGGCCCAGCCACACGAGAAGTCGTCAA
TAAGATGCTTAACTCCAAGCCTCATCCAGAGCAGTCTTATCGTTCCTGCCTTGGGCTGCTCAATCTGAGTAAAACGCATG
GCGAATCGCGCCTAGAGCAAGCCTGTAAAGATGCGCTGATGCTGACAAAACCCAACTACACCTTCGTCAATAATCTGTTG
AAGAACAATCGTGAAGGCCAACTAAGCAAAGACAAAGCGAGTACACCAAACCTCGTTCATAGCAATGTTCGTGGCCCGAA
CTGTTACCACTAG

Upstream 100 bases:

>100_bases
CGAAAACCGCGATCGGAATGTCCGAAACCCTTCGTTTTTCTCTTTTAAATCAATAGCTCGCTATTCTTTACGTCTTAAAC
AAGAAGGTAAGGAAGCGACC

Downstream 100 bases:

>100_bases
GAGAAGAGAGATGAACGCACTCAACGACCAACTCAAAACCCTGCGCTTGAGCCATGCCGCGAAAGCGTTAGAGCAGCAAC
AAGAGCAACTGAACACCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MAKKRTPMNKIKEVLRLKYDCGLSNRSIASCLKLGPSTISELLTRFKQSQLGWPLPEGCSDADLTKALYHSKKASRDKVM
PDFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCEHFTRWFKTQKRSMRQLHVAGDKLFIDYCGPRLQVVNPDTG
EVREAEVFVATLGASNYTYVEAFPSQGKSYWLEAHANAFEHFGGVPQLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQ
TAVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNERKMKQYGASRKALFDKLDKPALKP
LPKQRYLYTETKRAKVGPDYHIEYRRHYYSVPHQLVGHHVELEASNRLVQIYHKGNLVAQHPLSQRERGNSTQPEHMPSN
HQHQKWSPGRLLNWGANIGPATREVVNKMLNSKPHPEQSYRSCLGLLNLSKTHGESRLEQACKDALMLTKPNYTFVNNLL
KNNREGQLSKDKASTPNLVHSNVRGPNCYH

Sequences:

>Translated_510_residues
MAKKRTPMNKIKEVLRLKYDCGLSNRSIASCLKLGPSTISELLTRFKQSQLGWPLPEGCSDADLTKALYHSKKASRDKVM
PDFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCEHFTRWFKTQKRSMRQLHVAGDKLFIDYCGPRLQVVNPDTG
EVREAEVFVATLGASNYTYVEAFPSQGKSYWLEAHANAFEHFGGVPQLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQ
TAVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNERKMKQYGASRKALFDKLDKPALKP
LPKQRYLYTETKRAKVGPDYHIEYRRHYYSVPHQLVGHHVELEASNRLVQIYHKGNLVAQHPLSQRERGNSTQPEHMPSN
HQHQKWSPGRLLNWGANIGPATREVVNKMLNSKPHPEQSYRSCLGLLNLSKTHGESRLEQACKDALMLTKPNYTFVNNLL
KNNREGQLSKDKASTPNLVHSNVRGPNCYH
>Mature_509_residues
AKKRTPMNKIKEVLRLKYDCGLSNRSIASCLKLGPSTISELLTRFKQSQLGWPLPEGCSDADLTKALYHSKKASRDKVMP
DFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCEHFTRWFKTQKRSMRQLHVAGDKLFIDYCGPRLQVVNPDTGE
VREAEVFVATLGASNYTYVEAFPSQGKSYWLEAHANAFEHFGGVPQLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQT
AVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNERKMKQYGASRKALFDKLDKPALKPL
PKQRYLYTETKRAKVGPDYHIEYRRHYYSVPHQLVGHHVELEASNRLVQIYHKGNLVAQHPLSQRERGNSTQPEHMPSNH
QHQKWSPGRLLNWGANIGPATREVVNKMLNSKPHPEQSYRSCLGLLNLSKTHGESRLEQACKDALMLTKPNYTFVNNLLK
NNREGQLSKDKASTPNLVHSNVRGPNCYH

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017895
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 59091; Mature: 58960

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKRTPMNKIKEVLRLKYDCGLSNRSIASCLKLGPSTISELLTRFKQSQLGWPLPEGCS
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
DADLTKALYHSKKASRDKVMPDFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HFTRWFKTQKRSMRQLHVAGDKLFIDYCGPRLQVVNPDTGEVREAEVFVATLGASNYTYV
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCHHHEEEEEEECCCCCEEE
EAFPSQGKSYWLEAHANAFEHFGGVPQLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQ
EECCCCCCCEEHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TAVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNERKMK
HHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYGASRKALFDKLDKPALKPLPKQRYLYTETKRAKVGPDYHIEYRRHYYSVPHQLVGHHV
HHCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHCCEE
ELEASNRLVQIYHKGNLVAQHPLSQRERGNSTQPEHMPSNHQHQKWSPGRLLNWGANIGP
EEECCCCEEEEEECCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCH
ATREVVNKMLNSKPHPEQSYRSCLGLLNLSKTHGESRLEQACKDALMLTKPNYTFVNNLL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCHHHHHHHH
KNNREGQLSKDKASTPNLVHSNVRGPNCYH
HCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
AKKRTPMNKIKEVLRLKYDCGLSNRSIASCLKLGPSTISELLTRFKQSQLGWPLPEGCS
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
DADLTKALYHSKKASRDKVMPDFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HFTRWFKTQKRSMRQLHVAGDKLFIDYCGPRLQVVNPDTGEVREAEVFVATLGASNYTYV
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCHHHEEEEEEECCCCCEEE
EAFPSQGKSYWLEAHANAFEHFGGVPQLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQ
EECCCCCCCEEHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TAVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNERKMK
HHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYGASRKALFDKLDKPALKPLPKQRYLYTETKRAKVGPDYHIEYRRHYYSVPHQLVGHHV
HHCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHCCEE
ELEASNRLVQIYHKGNLVAQHPLSQRERGNSTQPEHMPSNHQHQKWSPGRLLNWGANIGP
EEECCCCEEEEEECCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCH
ATREVVNKMLNSKPHPEQSYRSCLGLLNLSKTHGESRLEQACKDALMLTKPNYTFVNNLL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCHHHHHHHH
KNNREGQLSKDKASTPNLVHSNVRGPNCYH
HCCCCCCCCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]