| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977253
Identifier: 156977253
GI number: 156977253
Start: 1217808
End: 1218809
Strand: Reverse
Name: 156977253
Synonym: VIBHAR_06039
Alternate gene names: NA
Gene position: 1218809-1217808 (Counterclockwise)
Preceding gene: 156977254
Following gene: 156977251
Centisome position: 55.3
GC content: 46.21
Gene sequence:
>1002_bases GTGGATCCATTAACTCAAGGATTAGTTGGGGCATCCTTGTCCCTGTCAGCGGGTAAAAAGCAGCATCTAGTGTCTGCTGG TGCACTTGGCTTACTTGCAGGCATGGCGCCAGACTTGGACATATTGATCCGATCAACCAAGGATCCATTGCTGTTTTTGG AATTTCACCGACAGTTCACACATTCACTTTTCTTTATCCCTATTGGAAGCTTTATCTGTGCCCTGATATTACATCCACTT ATTGCTAAAAAAGGTAGATTATCCTTCAAACAAAGCTGGTGGTACTGCGCATTAGGTTACGCTACGCATGGCTTATTGGA CGCATGTACCAGCTACGGGACCCAGCTCTTATGGCCGTTCACCGATACCCGTTATTCTTGGAGTACGGTTTCCGTGATTG ACCCTCTTTTTACCTTACCAATCTTGTTCACTTTGATACTTGGCCTGATGAAGCGTAACCCTTGGTATCCGCGTATTGCT GTAGTTTGGGCGCTTGTTTATCTCACATTTGGCATGTATCAAAGAGACCGAGCAGAAGAGGCAGGTTGGGCGTTGGCTGA AGCAAGGCAGCATACGCCACAAAGATTAGAAGCCAAACCCACGTTCGCAAATACCTTGGTTTGGAAAGTCATCTACGAAA CCGAACGCCATTACTACGTTGATGCCATAAGAGCAGGGAGGTCAATAAAAACGTATACCGGAGAGTCCATTGCCAAGTTG AATGTGGCTGCAGATTTTCCATGGTTGGATCCTGCATCGCAGCAAGCCAAAGACATTGAACGATTTCGTTGGTTTTCTGA TGGCTTCATCGCCAGAGCCCCAAACAAGGGATTGCGAATCATTGACGTGCGTTACTCTATCGTACCAAATGAGTTCAACG CTCTGTGGGGGATTGAGTTATCAGAGACAGCCGATAAAGGTATGCATGTAGAATACACCACACATCGCGACAGCTCTCAG CAATCAAGGCAAGCTTTTATTGAGATGTTGAAAGGCGATTAA
Upstream 100 bases:
>100_bases GCTTTCGGCGTGATGGATTAAAACCAGTCCTTTTATTTAAATACGGAGATTTTATGGGGCAAAGATTTCTCGTTTTTAAG CACAGCAGAGTGAACAAACC
Downstream 100 bases:
>100_bases CCGAACGACACCACAAGTTACGACGTGTATTAAAAGTCTTTAATCAGAGTCGGTTTGTGTGAAAAAAAGAGTCTGCTAAA TAGAGATTTATATTCCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Membrane-Bound Metal-Dependent Hydrolase Family Protein; Membrane Bound Hydrolase; Hydrolase; Transmembrane Metal-Dependent Hydrolase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFTHSLFFIPIGSFICALILHPL IAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPFTDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIA VVWALVYLTFGMYQRDRAEEAGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIELSETADKGMHVEYTTHRDSSQ QSRQAFIEMLKGD
Sequences:
>Translated_333_residues MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFTHSLFFIPIGSFICALILHPL IAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPFTDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIA VVWALVYLTFGMYQRDRAEEAGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIELSETADKGMHVEYTTHRDSSQ QSRQAFIEMLKGD >Mature_333_residues MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFTHSLFFIPIGSFICALILHPL IAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPFTDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIA VVWALVYLTFGMYQRDRAEEAGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIELSETADKGMHVEYTTHRDSSQ QSRQAFIEMLKGD
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37798; Mature: 37798
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFT CCCHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEHHHHHHHHH HSLFFIPIGSFICALILHPLIAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPF HHEHEEEHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEHHHHHHHHHHHHHCCCEEEEEE TDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIAVVWALVYLTFGMYQRDRAEE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL HHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCEEHHHHHCCCCEEEECCCCEEEE NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIEL EEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCCCEECCEE SETADKGMHVEYTTHRDSSQQSRQAFIEMLKGD HHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFT CCCHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEHHHHHHHHH HSLFFIPIGSFICALILHPLIAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPF HHEHEEEHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEHHHHHHHHHHHHHCCCEEEEEE TDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIAVVWALVYLTFGMYQRDRAEE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL HHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCEEHHHHHCCCCEEEECCCCEEEE NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIEL EEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCCCEECCEE SETADKGMHVEYTTHRDSSQQSRQAFIEMLKGD HHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA