Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156977253

Identifier: 156977253

GI number: 156977253

Start: 1217808

End: 1218809

Strand: Reverse

Name: 156977253

Synonym: VIBHAR_06039

Alternate gene names: NA

Gene position: 1218809-1217808 (Counterclockwise)

Preceding gene: 156977254

Following gene: 156977251

Centisome position: 55.3

GC content: 46.21

Gene sequence:

>1002_bases
GTGGATCCATTAACTCAAGGATTAGTTGGGGCATCCTTGTCCCTGTCAGCGGGTAAAAAGCAGCATCTAGTGTCTGCTGG
TGCACTTGGCTTACTTGCAGGCATGGCGCCAGACTTGGACATATTGATCCGATCAACCAAGGATCCATTGCTGTTTTTGG
AATTTCACCGACAGTTCACACATTCACTTTTCTTTATCCCTATTGGAAGCTTTATCTGTGCCCTGATATTACATCCACTT
ATTGCTAAAAAAGGTAGATTATCCTTCAAACAAAGCTGGTGGTACTGCGCATTAGGTTACGCTACGCATGGCTTATTGGA
CGCATGTACCAGCTACGGGACCCAGCTCTTATGGCCGTTCACCGATACCCGTTATTCTTGGAGTACGGTTTCCGTGATTG
ACCCTCTTTTTACCTTACCAATCTTGTTCACTTTGATACTTGGCCTGATGAAGCGTAACCCTTGGTATCCGCGTATTGCT
GTAGTTTGGGCGCTTGTTTATCTCACATTTGGCATGTATCAAAGAGACCGAGCAGAAGAGGCAGGTTGGGCGTTGGCTGA
AGCAAGGCAGCATACGCCACAAAGATTAGAAGCCAAACCCACGTTCGCAAATACCTTGGTTTGGAAAGTCATCTACGAAA
CCGAACGCCATTACTACGTTGATGCCATAAGAGCAGGGAGGTCAATAAAAACGTATACCGGAGAGTCCATTGCCAAGTTG
AATGTGGCTGCAGATTTTCCATGGTTGGATCCTGCATCGCAGCAAGCCAAAGACATTGAACGATTTCGTTGGTTTTCTGA
TGGCTTCATCGCCAGAGCCCCAAACAAGGGATTGCGAATCATTGACGTGCGTTACTCTATCGTACCAAATGAGTTCAACG
CTCTGTGGGGGATTGAGTTATCAGAGACAGCCGATAAAGGTATGCATGTAGAATACACCACACATCGCGACAGCTCTCAG
CAATCAAGGCAAGCTTTTATTGAGATGTTGAAAGGCGATTAA

Upstream 100 bases:

>100_bases
GCTTTCGGCGTGATGGATTAAAACCAGTCCTTTTATTTAAATACGGAGATTTTATGGGGCAAAGATTTCTCGTTTTTAAG
CACAGCAGAGTGAACAAACC

Downstream 100 bases:

>100_bases
CCGAACGACACCACAAGTTACGACGTGTATTAAAAGTCTTTAATCAGAGTCGGTTTGTGTGAAAAAAAGAGTCTGCTAAA
TAGAGATTTATATTCCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Membrane-Bound Metal-Dependent Hydrolase Family Protein; Membrane Bound Hydrolase; Hydrolase; Transmembrane Metal-Dependent Hydrolase

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFTHSLFFIPIGSFICALILHPL
IAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPFTDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIA
VVWALVYLTFGMYQRDRAEEAGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL
NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIELSETADKGMHVEYTTHRDSSQ
QSRQAFIEMLKGD

Sequences:

>Translated_333_residues
MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFTHSLFFIPIGSFICALILHPL
IAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPFTDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIA
VVWALVYLTFGMYQRDRAEEAGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL
NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIELSETADKGMHVEYTTHRDSSQ
QSRQAFIEMLKGD
>Mature_333_residues
MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFTHSLFFIPIGSFICALILHPL
IAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPFTDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIA
VVWALVYLTFGMYQRDRAEEAGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL
NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIELSETADKGMHVEYTTHRDSSQ
QSRQAFIEMLKGD

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37798; Mature: 37798

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFT
CCCHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEHHHHHHHHH
HSLFFIPIGSFICALILHPLIAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPF
HHEHEEEHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEHHHHHHHHHHHHHCCCEEEEEE
TDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIAVVWALVYLTFGMYQRDRAEE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL
HHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCEEHHHHHCCCCEEEECCCCEEEE
NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIEL
EEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCCCEECCEE
SETADKGMHVEYTTHRDSSQQSRQAFIEMLKGD
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDPLTQGLVGASLSLSAGKKQHLVSAGALGLLAGMAPDLDILIRSTKDPLLFLEFHRQFT
CCCHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEHHHHHHHHH
HSLFFIPIGSFICALILHPLIAKKGRLSFKQSWWYCALGYATHGLLDACTSYGTQLLWPF
HHEHEEEHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEHHHHHHHHHHHHHCCCEEEEEE
TDTRYSWSTVSVIDPLFTLPILFTLILGLMKRNPWYPRIAVVWALVYLTFGMYQRDRAEE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGWALAEARQHTPQRLEAKPTFANTLVWKVIYETERHYYVDAIRAGRSIKTYTGESIAKL
HHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCEEHHHHHCCCCEEEECCCCEEEE
NVAADFPWLDPASQQAKDIERFRWFSDGFIARAPNKGLRIIDVRYSIVPNEFNALWGIEL
EEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCCCEECCEE
SETADKGMHVEYTTHRDSSQQSRQAFIEMLKGD
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA