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The map label for this gene is mipA [H]

Identifier: 156977234

GI number: 156977234

Start: 1204493

End: 1205128

Strand: Reverse

Name: mipA [H]

Synonym: VIBHAR_06020

Alternate gene names: 156977234

Gene position: 1205128-1204493 (Counterclockwise)

Preceding gene: 156977235

Following gene: 156977232

Centisome position: 54.68

GC content: 43.4

Gene sequence:

>636_bases
ATGGATACGCAGTTTACACCTTTACCTTCGATTGTTTATCGAGATAAGCACGTGAGTGTTGAGGGTACGACAGCAAGTTA
CAGCTTTAATGGCCGAGGCGCACCGATTGAGTACTTTGCGAAAGTGGGCTTCGATCCTAGGATTATGCGACCTTCGGATT
CGAGTGATGTAGACATGCAGAAGCTAGACAAGCGTAAGACATCCTTCATGGGTGGAGCAGGGGTGAGATTCAACTTTCCT
GGAACCACCGCGTTTCTAGAAAGCACGATCGCAACCGATATCAGTGGAGTTCATAATGGTCATTACGGAGAGATCAAAGC
GGCCTATCCGATAAGAATGGGTGCGTTTGGTATCACGCCTTCAATCGGTTATCAAATAAACAGCGCAGATCTTAATAATC
ATCTTTACGGTGTATCTCGTGAAGAGGCGAGTCGTACTCGATTTGATGAATATTCCATGGACTATGAGGGTGATTACTTC
ATTGGCTTGAATGGCTATATGTTCTTAACCAAAAAAATCAGTATTTCAGGTAGCGTTCGCTACGTGAGTCTTGAAGATGA
TTTGAAAAAAAGTCCAATCCTTTCAGAAACAGACAGCATGACCGCATATTTGTCGATCAATTACACCTTTTTCTAA

Upstream 100 bases:

>100_bases
ATTACTTGTGCCGACATTATTATTTAGCGCTTATTCTCACGCCGATAGCTCTTTGTCTCTTGGTATTGGTGCGCTTTATT
CTCCTTCTCCATATATTGGA

Downstream 100 bases:

>100_bases
ACAGCCTTTTTCTGTCAAATAGAAATATAAGCCGGCACACTGTGTCGGCTGTTTAATATATTTGGAGTGCCGTTATTTTT
CTTATCTTTATTATTCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MDTQFTPLPSIVYRDKHVSVEGTTASYSFNGRGAPIEYFAKVGFDPRIMRPSDSSDVDMQKLDKRKTSFMGGAGVRFNFP
GTTAFLESTIATDISGVHNGHYGEIKAAYPIRMGAFGITPSIGYQINSADLNNHLYGVSREEASRTRFDEYSMDYEGDYF
IGLNGYMFLTKKISISGSVRYVSLEDDLKKSPILSETDSMTAYLSINYTFF

Sequences:

>Translated_211_residues
MDTQFTPLPSIVYRDKHVSVEGTTASYSFNGRGAPIEYFAKVGFDPRIMRPSDSSDVDMQKLDKRKTSFMGGAGVRFNFP
GTTAFLESTIATDISGVHNGHYGEIKAAYPIRMGAFGITPSIGYQINSADLNNHLYGVSREEASRTRFDEYSMDYEGDYF
IGLNGYMFLTKKISISGSVRYVSLEDDLKKSPILSETDSMTAYLSINYTFF
>Mature_211_residues
MDTQFTPLPSIVYRDKHVSVEGTTASYSFNGRGAPIEYFAKVGFDPRIMRPSDSSDVDMQKLDKRKTSFMGGAGVRFNFP
GTTAFLESTIATDISGVHNGHYGEIKAAYPIRMGAFGITPSIGYQINSADLNNHLYGVSREEASRTRFDEYSMDYEGDYF
IGLNGYMFLTKKISISGSVRYVSLEDDLKKSPILSETDSMTAYLSINYTFF

Specific function: May serve as a scaffold protein required for the formation of a complex with mrcB/ponB and mltA, this complex could play a role in enlargement and septation of the murein sacculus [H]

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

Organism=Escherichia coli, GI1788082, Length=209, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1790010, Length=165, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 23540; Mature: 23540

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQFTPLPSIVYRDKHVSVEGTTASYSFNGRGAPIEYFAKVGFDPRIMRPSDSSDVDMQ
CCCCCCCCCCEEEECCEEEEECCEEEEEECCCCCCHHHHHHCCCCCEEECCCCCCCCCHH
KLDKRKTSFMGGAGVRFNFPGTTAFLESTIATDISGVHNGHYGEIKAAYPIRMGAFGITP
HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCEECCC
SIGYQINSADLNNHLYGVSREEASRTRFDEYSMDYEGDYFIGLNGYMFLTKKISISGSVR
CCCEEEECCCCCCEEEECCHHHHHHHCCHHCCCCCCCCEEEECCCEEEEEEEEEECCCEE
YVSLEDDLKKSPILSETDSMTAYLSINYTFF
EEEECCCCCCCCCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MDTQFTPLPSIVYRDKHVSVEGTTASYSFNGRGAPIEYFAKVGFDPRIMRPSDSSDVDMQ
CCCCCCCCCCEEEECCEEEEECCEEEEEECCCCCCHHHHHHCCCCCEEECCCCCCCCCHH
KLDKRKTSFMGGAGVRFNFPGTTAFLESTIATDISGVHNGHYGEIKAAYPIRMGAFGITP
HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCEECCC
SIGYQINSADLNNHLYGVSREEASRTRFDEYSMDYEGDYFIGLNGYMFLTKKISISGSVR
CCCEEEECCCCCCEEEECCHHHHHHHCCHHCCCCCCCCEEEECCCEEEEEEEEEECCCEE
YVSLEDDLKKSPILSETDSMTAYLSINYTFF
EEEECCCCCCCCCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10037771; 10806384 [H]