| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977230
Identifier: 156977230
GI number: 156977230
Start: 1201041
End: 1201301
Strand: Reverse
Name: 156977230
Synonym: VIBHAR_06016
Alternate gene names: NA
Gene position: 1201301-1201041 (Counterclockwise)
Preceding gene: 156977232
Following gene: 156977229
Centisome position: 54.51
GC content: 44.44
Gene sequence:
>261_bases ATGTCAAAAAGCTCCAAGCTTCACAATGAAGACAAACTGGTTAAGAAGGCACTAGAAATTGGTGGGAAGATGGCGAAACT ACAAGGTTTTGACCTTCCTCAGTCACCACAGCCTGTAAGAGTAAAAGCGATTTATCTATTCTTGGTCGATGCAAAACAGA TCACGCCACTACCTGAAAGCAAGCTAGACGGTGCAAGCATCAAACACCGACTGGCAGTATGGATACACAGTGCGTTGCCA GATAACGACCCTCTAAAGTAA
Upstream 100 bases:
>100_bases CTTGGCAATAACGCATAAACTTACCAATATGCGAGCTTACTAACATGCCATGCGTGACACTTAATGTATTCTTAACTGAA GCGAAGAAGAGGATTTATCA
Downstream 100 bases:
>100_bases AAAACTCAAGAAGTCACATCGGTAAATAACAACAAGGCGAGCCAAATGGTTCGCCTTGTTTGAGAAATGGCCCCCAATTT TCGGACATGACTTTAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSKSSKLHNEDKLVKKALEIGGKMAKLQGFDLPQSPQPVRVKAIYLFLVDAKQITPLPESKLDGASIKHRLAVWIHSALP DNDPLK
Sequences:
>Translated_86_residues MSKSSKLHNEDKLVKKALEIGGKMAKLQGFDLPQSPQPVRVKAIYLFLVDAKQITPLPESKLDGASIKHRLAVWIHSALP DNDPLK >Mature_85_residues SKSSKLHNEDKLVKKALEIGGKMAKLQGFDLPQSPQPVRVKAIYLFLVDAKQITPLPESKLDGASIKHRLAVWIHSALPD NDPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9540; Mature: 9409
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSSKLHNEDKLVKKALEIGGKMAKLQGFDLPQSPQPVRVKAIYLFLVDAKQITPLPES CCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC KLDGASIKHRLAVWIHSALPDNDPLK CCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SKSSKLHNEDKLVKKALEIGGKMAKLQGFDLPQSPQPVRVKAIYLFLVDAKQITPLPES CCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC KLDGASIKHRLAVWIHSALPDNDPLK CCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA