| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977226
Identifier: 156977226
GI number: 156977226
Start: 1199062
End: 1199556
Strand: Reverse
Name: 156977226
Synonym: VIBHAR_06012
Alternate gene names: NA
Gene position: 1199556-1199062 (Counterclockwise)
Preceding gene: 156977228
Following gene: 156977220
Centisome position: 54.43
GC content: 43.03
Gene sequence:
>495_bases ATGTCTAAAGATTTCGAATTCACCACAGAATACATACTCGACAAGCCTTTTTTTGCAGAGTGCTATGACCAAACTAGCCA GCCAACTAAGTTCCCACAGGCGTATTTGAAAGGATTACTCTTTCTCATTTTTGGTGTGGTTTTATTAGAGTTCGAACTGC TACCCAATGGTTATGTCGGTTGGTTCTTTATCGTGTTGAGTGTGATTGAAGCATGCAGCGTTTACTTCAAAAGGACTTGG TGGCTTTGGCGTCAAACCATCAGTTCAAGCCGTGGCAGCAAAGTGGTATTTGAAGTGAATGCGGATGGCGTGCACTACAA AAGCGGTAAAGTTGATCGCAGACTTGCTTGGAAAGAAATCGACCAGCTCGAACAAACTGATTTGGGCTTCATTCTTCATC TTGGTAAACAACGCCAATACATCAGCAAATCTTGCTTAAACGAAGAAGTCATTTCGTTTATGGCAGCGCAGCACGCCGCA TCTAAAGCGAACTAA
Upstream 100 bases:
>100_bases TCAAAATCGCTAAAGATAACGCCTGAGAAGCGCTACAATGCACGTGTTGCAAGAGCGCAACCAAGAACACTCATTCACAG AAACCTTAAAGTAACCATAC
Downstream 100 bases:
>100_bases TCACTAGCTTTAAATTGAAAAGGCGAACCATGTGGTTCGCCTTTTTTGATTTTCATTCTTTGTCTGTGGGACAGTGCTTA TAAGAAAAATCAGAGTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSKDFEFTTEYILDKPFFAECYDQTSQPTKFPQAYLKGLLFLIFGVVLLEFELLPNGYVGWFFIVLSVIEACSVYFKRTW WLWRQTISSSRGSKVVFEVNADGVHYKSGKVDRRLAWKEIDQLEQTDLGFILHLGKQRQYISKSCLNEEVISFMAAQHAA SKAN
Sequences:
>Translated_164_residues MSKDFEFTTEYILDKPFFAECYDQTSQPTKFPQAYLKGLLFLIFGVVLLEFELLPNGYVGWFFIVLSVIEACSVYFKRTW WLWRQTISSSRGSKVVFEVNADGVHYKSGKVDRRLAWKEIDQLEQTDLGFILHLGKQRQYISKSCLNEEVISFMAAQHAA SKAN >Mature_163_residues SKDFEFTTEYILDKPFFAECYDQTSQPTKFPQAYLKGLLFLIFGVVLLEFELLPNGYVGWFFIVLSVIEACSVYFKRTWW LWRQTISSSRGSKVVFEVNADGVHYKSGKVDRRLAWKEIDQLEQTDLGFILHLGKQRQYISKSCLNEEVISFMAAQHAAS KAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19030; Mature: 18899
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDFEFTTEYILDKPFFAECYDQTSQPTKFPQAYLKGLLFLIFGVVLLEFELLPNGYVG CCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH WFFIVLSVIEACSVYFKRTWWLWRQTISSSRGSKVVFEVNADGVHYKSGKVDRRLAWKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCHHHHHHHHH DQLEQTDLGFILHLGKQRQYISKSCLNEEVISFMAAQHAASKAN HHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKDFEFTTEYILDKPFFAECYDQTSQPTKFPQAYLKGLLFLIFGVVLLEFELLPNGYVG CCCHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH WFFIVLSVIEACSVYFKRTWWLWRQTISSSRGSKVVFEVNADGVHYKSGKVDRRLAWKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCHHHHHHHHH DQLEQTDLGFILHLGKQRQYISKSCLNEEVISFMAAQHAASKAN HHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA