| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is iutA [H]
Identifier: 156977225
GI number: 156977225
Start: 1196825
End: 1198966
Strand: Direct
Name: iutA [H]
Synonym: VIBHAR_06011
Alternate gene names: 156977225
Gene position: 1196825-1198966 (Clockwise)
Preceding gene: 156977224
Following gene: 156977227
Centisome position: 54.3
GC content: 45.85
Gene sequence:
>2142_bases ATGAATAAACTTCCTTTCACTCTTTCAGTATTAGCACTTTCAATCGCGAGTGCACACGCTGAGACAGATACGCAAAACGA AGGCGTACAAGAGATGGAAACCATGGTGGTAACAGCGACCCGTTATACCCAAACGCCAGATAAAATTGCAGGTGCGGTCA CCGTCATCGATTCTGAGGATATTGAAGAACAATCTATCATCTCTGACGACCTAACCAGCATTCTTGCTACCTTGGTTCCG GGTATTACACCAAGTCGCCAAAAGATGTCTAACCAAGGCGAAAACCTGCGTGGTCGCCAAGCGCTCATCATGATTGATGG TGTACCTCAAGTGAACCCTCTTCGAAACGGCAACCGTTACGGCTACACGATTGATCCATCAATGGTTGAACGAATCGAGG TCGTGAATGGTGCAAGTGCGGTTCAAGGTATGGGAGCAACAGGCGGTATCATCAACTACATCACGAAAGGTGCAAAACCG GGTGATGATTGGAAACAAACGGTTGGTACTCGTGTGACTTCAAGCTTCGATAACGACAGCACTGGCGGAAAAGTTTTCTA CAACGTCAGTAAGTACGATGACGAATTTGACCTGTTCTTTGGTGGTTCTTGGGATCAACAAGGCCTTTACTACGATAGTA ATGGTAACCCTATTGGCATGAACGACATTCAGGGTGAAACGCAAGACAGCACAGCGACGGATATTTTCTTTAAAGGTGGC TACAACTTTAATGACGGTAATCAGCGTATCGAATTGACGGCTAACACCTATACGATCGAGGCCAATGGTAACTATAAAGG TGTCAAAGGTGATTTCGAGAATGGTATTCCTGGGACAGTAGAACCAGGCTCGCCTTCAGGTGAACCAGTGAGCAATGAAG CTCAGTTATTCAACCTACAATATACGAACTACGATCTGGGCAATGGTATGCTTACCGCTCAGATGTTCTACCAAAACTAC GATGCGGTGTTTGGTGAAGCAACGTGGTACCCAACCGAAACCAAAGTTAACGACCAAGGCGCTATCTCTTCTCAAAAGAC TGGCTTTAAAGTTGGTTACGAAACCTATGACTTACTCGACCTCGATGATACTTGGGTATTTGGCTTAGATGGCCTACACG ATCAAACGGAGCAAACGCTCGATCAGTCAGGTTTGAACGTAACGCCTCTTATGGAATATTACAGCCTAGCGCCGTTCGTT CAAGGTGACTTCCTAGTGACGGATGCGCTCCGCCTATCGACCGGCGTTCGCTATGAAAGCATCCGAGTAAAAGTAAGCGA TGGTCAAACTATCTATGGCTACGGTGTCGATGGACACAACTCTGAGATCATTGGTGGCACACAGGATTCTTCAAAATCGG TATTCAACGTAGGCGCCGTTTATACTTTTACGGATGAATTCAGTACGTTTGCTAGCTTCAACCAAGGGTTTGGCCTGCCA GATATTGGTCGTATCCTACGTGGTAACTGGGTTGGTGATGCGAACCCTGGCCAAAACGGTACGCCAATTGATTTCAATAC AATGCCAGCTGTAGAACCGGTTGTAACAGACAACTATGAGTTAGGCATTACCTATCGCGGCGACAAGTTGTTTGTTAGTG CAAGTACCTACATGTCTATTGCAAAAGATGGCGCTAACCTAGCACTAAACAACAATGGTACCTACGACGTAGAACGCCAA CGTACCGACATCATGGGTTACGAACTGACCTCAACCTACCAAGTGCTCGACTCAACTAAGCTGAGTGCTATGTACGCGCA CGTTGAAGGTGAAGTCGATACTACAGGCAATGGCAGTGTTGACTCTGACATGGATCTAAAAAACCTGACACCAGATCGCC TACTGCTTGCCGTTAACCATAATTTCTCTGATGTGCTAGCGAGCCGAATTCAATACAACTACCTATTCGACAGCAAGAAA AGTGCAAACAATGTTGGCGCAGAACAAAACTTTGATGGCTACGGACTGGTTGATTTCAGTACGCATTACGACATGCGTGA TAAAGGCCGTATCGCTTTTGGTATTGAAAACGTAATGGATGAGCAATACATCAACTACTTCAGCCAAATTCGTAATAACA GCTCTTACTACTTCTCTGGTCGTGGCCGCACATTCAGCTTAAGTTACGAGCTTGATTTCTAA
Upstream 100 bases:
>100_bases AATGATCATGAATGACCCCGTTTCAAACAAACCTATGTGTATAAACCTATAAAAACAATCGACATAGCCTTAATTTAAAT ACTCAAGACAGGATATTAAA
Downstream 100 bases:
>100_bases CTCTGATTTTTCTTATAAGCACTGTCCCACAGACAAAGAATGAAAATCAAAAAAGGCGAACCACATGGTTCGCCTTTTCA ATTTAAAGCTAGTGATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 713; Mature: 713
Protein sequence:
>713_residues MNKLPFTLSVLALSIASAHAETDTQNEGVQEMETMVVTATRYTQTPDKIAGAVTVIDSEDIEEQSIISDDLTSILATLVP GITPSRQKMSNQGENLRGRQALIMIDGVPQVNPLRNGNRYGYTIDPSMVERIEVVNGASAVQGMGATGGIINYITKGAKP GDDWKQTVGTRVTSSFDNDSTGGKVFYNVSKYDDEFDLFFGGSWDQQGLYYDSNGNPIGMNDIQGETQDSTATDIFFKGG YNFNDGNQRIELTANTYTIEANGNYKGVKGDFENGIPGTVEPGSPSGEPVSNEAQLFNLQYTNYDLGNGMLTAQMFYQNY DAVFGEATWYPTETKVNDQGAISSQKTGFKVGYETYDLLDLDDTWVFGLDGLHDQTEQTLDQSGLNVTPLMEYYSLAPFV QGDFLVTDALRLSTGVRYESIRVKVSDGQTIYGYGVDGHNSEIIGGTQDSSKSVFNVGAVYTFTDEFSTFASFNQGFGLP DIGRILRGNWVGDANPGQNGTPIDFNTMPAVEPVVTDNYELGITYRGDKLFVSASTYMSIAKDGANLALNNNGTYDVERQ RTDIMGYELTSTYQVLDSTKLSAMYAHVEGEVDTTGNGSVDSDMDLKNLTPDRLLLAVNHNFSDVLASRIQYNYLFDSKK SANNVGAEQNFDGYGLVDFSTHYDMRDKGRIAFGIENVMDEQYINYFSQIRNNSSYYFSGRGRTFSLSYELDF
Sequences:
>Translated_713_residues MNKLPFTLSVLALSIASAHAETDTQNEGVQEMETMVVTATRYTQTPDKIAGAVTVIDSEDIEEQSIISDDLTSILATLVP GITPSRQKMSNQGENLRGRQALIMIDGVPQVNPLRNGNRYGYTIDPSMVERIEVVNGASAVQGMGATGGIINYITKGAKP GDDWKQTVGTRVTSSFDNDSTGGKVFYNVSKYDDEFDLFFGGSWDQQGLYYDSNGNPIGMNDIQGETQDSTATDIFFKGG YNFNDGNQRIELTANTYTIEANGNYKGVKGDFENGIPGTVEPGSPSGEPVSNEAQLFNLQYTNYDLGNGMLTAQMFYQNY DAVFGEATWYPTETKVNDQGAISSQKTGFKVGYETYDLLDLDDTWVFGLDGLHDQTEQTLDQSGLNVTPLMEYYSLAPFV QGDFLVTDALRLSTGVRYESIRVKVSDGQTIYGYGVDGHNSEIIGGTQDSSKSVFNVGAVYTFTDEFSTFASFNQGFGLP DIGRILRGNWVGDANPGQNGTPIDFNTMPAVEPVVTDNYELGITYRGDKLFVSASTYMSIAKDGANLALNNNGTYDVERQ RTDIMGYELTSTYQVLDSTKLSAMYAHVEGEVDTTGNGSVDSDMDLKNLTPDRLLLAVNHNFSDVLASRIQYNYLFDSKK SANNVGAEQNFDGYGLVDFSTHYDMRDKGRIAFGIENVMDEQYINYFSQIRNNSSYYFSGRGRTFSLSYELDF >Mature_713_residues MNKLPFTLSVLALSIASAHAETDTQNEGVQEMETMVVTATRYTQTPDKIAGAVTVIDSEDIEEQSIISDDLTSILATLVP GITPSRQKMSNQGENLRGRQALIMIDGVPQVNPLRNGNRYGYTIDPSMVERIEVVNGASAVQGMGATGGIINYITKGAKP GDDWKQTVGTRVTSSFDNDSTGGKVFYNVSKYDDEFDLFFGGSWDQQGLYYDSNGNPIGMNDIQGETQDSTATDIFFKGG YNFNDGNQRIELTANTYTIEANGNYKGVKGDFENGIPGTVEPGSPSGEPVSNEAQLFNLQYTNYDLGNGMLTAQMFYQNY DAVFGEATWYPTETKVNDQGAISSQKTGFKVGYETYDLLDLDDTWVFGLDGLHDQTEQTLDQSGLNVTPLMEYYSLAPFV QGDFLVTDALRLSTGVRYESIRVKVSDGQTIYGYGVDGHNSEIIGGTQDSSKSVFNVGAVYTFTDEFSTFASFNQGFGLP DIGRILRGNWVGDANPGQNGTPIDFNTMPAVEPVVTDNYELGITYRGDKLFVSASTYMSIAKDGANLALNNNGTYDVERQ RTDIMGYELTSTYQVLDSTKLSAMYAHVEGEVDTTGNGSVDSDMDLKNLTPDRLLLAVNHNFSDVLASRIQYNYLFDSKK SANNVGAEQNFDGYGLVDFSTHYDMRDKGRIAFGIENVMDEQYINYFSQIRNNSSYYFSGRGRTFSLSYELDF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786798, Length=181, Percent_Identity=32.5966850828729, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78449; Mature: 78449
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLPFTLSVLALSIASAHAETDTQNEGVQEMETMVVTATRYTQTPDKIAGAVTVIDSED CCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEECCCCHHHHCEEEEEEECCC IEEQSIISDDLTSILATLVPGITPSRQKMSNQGENLRGRQALIMIDGVPQVNPLRNGNRY CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEE GYTIDPSMVERIEVVNGASAVQGMGATGGIINYITKGAKPGDDWKQTVGTRVTSSFDNDS EEEECHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHCCHHCCCCCCCC TGGKVFYNVSKYDDEFDLFFGGSWDQQGLYYDSNGNPIGMNDIQGETQDSTATDIFFKGG CCCEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCEECCCCCCCCCCCCCEEEEEEECC YNFNDGNQRIELTANTYTIEANGNYKGVKGDFENGIPGTVEPGSPSGEPVSNEAQLFNLQ CCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE YTNYDLGNGMLTAQMFYQNYDAVFGEATWYPTETKVNDQGAISSQKTGFKVGYETYDLLD ECCEECCCCEEEEHHHHHCCHHHCCCEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEE LDDTWVFGLDGLHDQTEQTLDQSGLNVTPLMEYYSLAPFVQGDFLVTDALRLSTGVRYES CCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHCCCEEEE IRVKVSDGQTIYGYGVDGHNSEIIGGTQDSSKSVFNVGAVYTFTDEFSTFASFNQGFGLP EEEEECCCCEEEEECCCCCCCEEECCCCCCCCCEEEECEEEEECCCHHHHHHHHCCCCCC DIGRILRGNWVGDANPGQNGTPIDFNTMPAVEPVVTDNYELGITYRGDKLFVSASTYMSI HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCEEEEEEHHHHHH AKDGANLALNNNGTYDVERQRTDIMGYELTSTYQVLDSTKLSAMYAHVEGEVDTTGNGSV HCCCCEEEECCCCCEEECCCCCCCCCEEECHHHHHHCCCCEEEEEEEECCCEECCCCCCC DSDMDLKNLTPDRLLLAVNHNFSDVLASRIQYNYLFDSKKSANNVGAEQNFDGYGLVDFS CCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEC THYDMRDKGRIAFGIENVMDEQYINYFSQIRNNSSYYFSGRGRTFSLSYELDF CCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEECC >Mature Secondary Structure MNKLPFTLSVLALSIASAHAETDTQNEGVQEMETMVVTATRYTQTPDKIAGAVTVIDSED CCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEECCCCHHHHCEEEEEEECCC IEEQSIISDDLTSILATLVPGITPSRQKMSNQGENLRGRQALIMIDGVPQVNPLRNGNRY CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEE GYTIDPSMVERIEVVNGASAVQGMGATGGIINYITKGAKPGDDWKQTVGTRVTSSFDNDS EEEECHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHCCHHCCCCCCCC TGGKVFYNVSKYDDEFDLFFGGSWDQQGLYYDSNGNPIGMNDIQGETQDSTATDIFFKGG CCCEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCEECCCCCCCCCCCCCEEEEEEECC YNFNDGNQRIELTANTYTIEANGNYKGVKGDFENGIPGTVEPGSPSGEPVSNEAQLFNLQ CCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE YTNYDLGNGMLTAQMFYQNYDAVFGEATWYPTETKVNDQGAISSQKTGFKVGYETYDLLD ECCEECCCCEEEEHHHHHCCHHHCCCEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEE LDDTWVFGLDGLHDQTEQTLDQSGLNVTPLMEYYSLAPFVQGDFLVTDALRLSTGVRYES CCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHCCCEEEE IRVKVSDGQTIYGYGVDGHNSEIIGGTQDSSKSVFNVGAVYTFTDEFSTFASFNQGFGLP EEEEECCCCEEEEECCCCCCCEEECCCCCCCCCEEEECEEEEECCCHHHHHHHHCCCCCC DIGRILRGNWVGDANPGQNGTPIDFNTMPAVEPVVTDNYELGITYRGDKLFVSASTYMSI HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCEEEEEEHHHHHH AKDGANLALNNNGTYDVERQRTDIMGYELTSTYQVLDSTKLSAMYAHVEGEVDTTGNGSV HCCCCEEEECCCCCEEECCCCCCCCCEEECHHHHHHCCCCEEEEEEEECCCEECCCCCCC DSDMDLKNLTPDRLLLAVNHNFSDVLASRIQYNYLFDSKKSANNVGAEQNFDGYGLVDFS CCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEC THYDMRDKGRIAFGIENVMDEQYINYFSQIRNNSSYYFSGRGRTFSLSYELDF CCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA