Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977209

Identifier: 156977209

GI number: 156977209

Start: 1184520

End: 1185020

Strand: Reverse

Name: 156977209

Synonym: VIBHAR_05995

Alternate gene names: NA

Gene position: 1185020-1184520 (Counterclockwise)

Preceding gene: 156977210

Following gene: 156977208

Centisome position: 53.77

GC content: 43.71

Gene sequence:

>501_bases
ATGCGTTACTGGTGGCTAGGTATCTTGAGTTTTGGTAGCGTTGCTGCGCCTATTACAAAGTATTTACCTCTTTCGACATA
CATCAATAAAACGGAGTTTTATTCGTACGTTATCTCTTTGGATGTGCCAAATCAAGTGGTGCTAGAGTTTGATGAGCAGC
AGCAGCGTTTCCGAAGTCATGATGTTGATGTTGTGGTGTCATCGAACATTCCTAACGACGAAACAGGGCGTGGGTTTAAA
TACAATCTTTCTCTGCAGAATAACACATCTAATTGCAAGCGATCTTATAGTTTGGAGCAGACCCAAGACAATGTCATGAA
TTTGACCTTAGACGGCAAGGTTTTTGATGAGCAAAACCCTTTAGAGGAGCAGTTGTTGGCTTCACAAGGTGATGGTGTCT
TGGGAGGTAAGCACGTTTTGACGCTGAACAGTGATGTTATCACCGATGAGGCAGTGCAATGTAGTGGGACGATCACGCTG
GAGGCTGAACTTGCGTTATAA

Upstream 100 bases:

>100_bases
GGCGGCTCTCTTTAAGGCATATAGAGCAGTCCGGCTCGTAATAAGTAAATAAGGCAGGGAGCTGCCTTATTATTTTTTGG
TCTTTTTATGGGTGTAAAGT

Downstream 100 bases:

>100_bases
CAAGTGGTTTTTGATTTTTGGTATGTTTACGAGCAGCGGTTTAAGTGCTGCTCCTGCTGGTTTTGAAGATTTGACGACAT
TAGTACCGGCCGACATTACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSHDVDVVVSSNIPNDETGRGFK
YNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNPLEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITL
EAELAL

Sequences:

>Translated_166_residues
MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSHDVDVVVSSNIPNDETGRGFK
YNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNPLEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITL
EAELAL
>Mature_166_residues
MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSHDVDVVVSSNIPNDETGRGFK
YNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNPLEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITL
EAELAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18617; Mature: 18617

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSH
CEEEEEEEHHCCCHHHHHHHHCCHHHHCCCCEEEEEEEEECCCCEEEEEECHHHHHHHCC
DVDVVVSSNIPNDETGRGFKYNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNP
CEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCEEEEEECCEEECCCCC
LEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITLEAELAL
HHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCEEEEEEEECC
>Mature Secondary Structure
MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSH
CEEEEEEEHHCCCHHHHHHHHCCHHHHCCCCEEEEEEEEECCCCEEEEEECHHHHHHHCC
DVDVVVSSNIPNDETGRGFKYNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNP
CEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCEEEEEECCEEECCCCC
LEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITLEAELAL
HHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA