| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977209
Identifier: 156977209
GI number: 156977209
Start: 1184520
End: 1185020
Strand: Reverse
Name: 156977209
Synonym: VIBHAR_05995
Alternate gene names: NA
Gene position: 1185020-1184520 (Counterclockwise)
Preceding gene: 156977210
Following gene: 156977208
Centisome position: 53.77
GC content: 43.71
Gene sequence:
>501_bases ATGCGTTACTGGTGGCTAGGTATCTTGAGTTTTGGTAGCGTTGCTGCGCCTATTACAAAGTATTTACCTCTTTCGACATA CATCAATAAAACGGAGTTTTATTCGTACGTTATCTCTTTGGATGTGCCAAATCAAGTGGTGCTAGAGTTTGATGAGCAGC AGCAGCGTTTCCGAAGTCATGATGTTGATGTTGTGGTGTCATCGAACATTCCTAACGACGAAACAGGGCGTGGGTTTAAA TACAATCTTTCTCTGCAGAATAACACATCTAATTGCAAGCGATCTTATAGTTTGGAGCAGACCCAAGACAATGTCATGAA TTTGACCTTAGACGGCAAGGTTTTTGATGAGCAAAACCCTTTAGAGGAGCAGTTGTTGGCTTCACAAGGTGATGGTGTCT TGGGAGGTAAGCACGTTTTGACGCTGAACAGTGATGTTATCACCGATGAGGCAGTGCAATGTAGTGGGACGATCACGCTG GAGGCTGAACTTGCGTTATAA
Upstream 100 bases:
>100_bases GGCGGCTCTCTTTAAGGCATATAGAGCAGTCCGGCTCGTAATAAGTAAATAAGGCAGGGAGCTGCCTTATTATTTTTTGG TCTTTTTATGGGTGTAAAGT
Downstream 100 bases:
>100_bases CAAGTGGTTTTTGATTTTTGGTATGTTTACGAGCAGCGGTTTAAGTGCTGCTCCTGCTGGTTTTGAAGATTTGACGACAT TAGTACCGGCCGACATTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSHDVDVVVSSNIPNDETGRGFK YNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNPLEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITL EAELAL
Sequences:
>Translated_166_residues MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSHDVDVVVSSNIPNDETGRGFK YNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNPLEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITL EAELAL >Mature_166_residues MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSHDVDVVVSSNIPNDETGRGFK YNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNPLEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITL EAELAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18617; Mature: 18617
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSH CEEEEEEEHHCCCHHHHHHHHCCHHHHCCCCEEEEEEEEECCCCEEEEEECHHHHHHHCC DVDVVVSSNIPNDETGRGFKYNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNP CEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCEEEEEECCEEECCCCC LEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITLEAELAL HHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCEEEEEEEECC >Mature Secondary Structure MRYWWLGILSFGSVAAPITKYLPLSTYINKTEFYSYVISLDVPNQVVLEFDEQQQRFRSH CEEEEEEEHHCCCHHHHHHHHCCHHHHCCCCEEEEEEEEECCCCEEEEEECHHHHHHHCC DVDVVVSSNIPNDETGRGFKYNLSLQNNTSNCKRSYSLEQTQDNVMNLTLDGKVFDEQNP CEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCEEEEEECCEEECCCCC LEEQLLASQGDGVLGGKHVLTLNSDVITDEAVQCSGTITLEAELAL HHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA