| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yeeJ [C]
Identifier: 156977204
GI number: 156977204
Start: 1177110
End: 1179683
Strand: Reverse
Name: yeeJ [C]
Synonym: VIBHAR_05990
Alternate gene names: 156977204
Gene position: 1179683-1177110 (Counterclockwise)
Preceding gene: 156977205
Following gene: 156977199
Centisome position: 53.52
GC content: 49.26
Gene sequence:
>2574_bases GTGGAGAGAAGAGAAATGTGGCGAAAATCGATAGCAAGCTTGTTATTGCTTGTATTGTTTGGATGTGGCGGAGAAGGGGA TAAAGGGGATAACGCCTCCACCGCCACCGATAATGTTCTGGCCGATAATGTTCTGGCGCCTTTAGCCAGTGATGCCTTTA ACCAGTTGTCAATGGCGGATGGTCAAACGCAAGTGTCTTTGAAAGAATCGGTGGTTGACCCGCAAGGATTGCCGGTGACA CTGGAGTCGGTGACGGTGAGTCATGCTGATTGTCCAGCGCCCACGAGCATCAATCGAGAGCAACTCAGCTTTACGGTCGA AGCGAATGGGCCCGACATGTGTTTTTATGGTTATACGGTCAAAAACCATCCCAAAGAGATCGAGCACGCGAAGTCTGCGA GTGCGCAAAGCAATGTGATGATAAACTTGACCTCAGACCCCGCGCAGTTGGCACCAAAATCTAGGACGACGAATGTGGAT GAGACCATCACGATAGAGGTGCGTGACCCGGATTTAACCGCCGGTTATACCCTCGACCGTGAGGTTGTGGTGATGGGTGA TGGCGTCGCCAGTGGTAATAGCGAGACGGATGTAATCACTTATGAGGCGAACTCTCAGGGGGTGACACGTTTGGTGTACA CCATGACGAACGCCGATGGCAGTGCGCTTTTAGTGGGGACGGTTGACGTGGCGGTGTCAGGCCCCGGAAATCATGCGCCA GTGGCGACAGATGCGTCGTTTAGGATGGAATCTGATGAATCGCCCAAAACATTTGACCTCAGTGCTTATGTTAGTGATGA GGATGATGGTGATGACATCCAGCTTATTCTAGTTGACGCGTGGAATGCGCAGGTTGATTTAGCGGCGCCGGATGACACTA GCAATCTTTCGTTTACCTTTAAACCGGACCATGCTGGGTTTCACTATGTGAAGTATGTGGTGACTGACCATAAAGGCGGT TATGGTGTCGCGCAAGTAAAAATTGAGGTGGTTGACCTCTCTGCGGGGGCGACATGGGGAAATATCCAGATGGGGCTTAA ATTGTTTTTTGGCCCATTGACGAGCTCAGAAGCAGATTTACAAGGAGTCACTTCTACGAGTTCTAATTTTGATAGTAATG ATGCTGACGTGGCGACGTTTAACTTCGCTCGCGCTGAAGATTCCTGTCAAAGTAAGGGGCGCTTGCCGACTTCTGATGAA CTAAAGGCGCTTGCCCAATACAACAACGGTCAGGTAATTTCCGACGGTTGGCCGGTGGATTTGGCTTATTGGGCGAATAA TAATGGTACTGGTGAGCTGATTGATTTGAAGAACAACGGGTCAGTGGTACCGGAAACCAACCCTGGTGGTTACTATGTGT CTTGCATGAATGAAGCGGGCCTTGTTGTGGTGGACGCCGATTCTAGGCTTGAGGCGGTAGCGGATGATGCCGAACAGGCA GTCGTAGCGGTGAAGTTGACTCGGGACGATATGCCCGTAGAAGGTCAGTTGCTTGAGGCGTCAGCCCCCAACCGGACTAA TGTGACCTTTGACGATACAACTCTCTATACAAACGACAAAGGGGTAGCCAAGTTTGCCTTAAACACTTGGGAAGCAGGAC AGGTTCCGGTCAATATCAAGTACGACGGCGAAACGTTGTTGACGCAAAATGTGACGTTTGTTGCGGATGAAGCTACTGCT CGTTTAGTGCTTGAGGTAACCAAAAATAATGTATCATATGATGATTCAACTGGTAATGAGGTTGAGGCTACAATGTTGGA CGACAATAACAATCCGTTGGTGGGGCGCCCGGTAACCTTTACGTCGCCTGAGGAACAATCTGTCACCATTAATAAGGGCT CTGAAGTTACGGATGCTACGGGTAAGCAGAACGCATCAGTGGTTTGGAAGGATAGTTCGACAACTGATACCTCTACAACT GTTACTGTCACCGGAAGTTATACCCCCCAATCTACGGGAACTCCAATTTCAGATACCGCCGAGATAACGTTTATTTCACC ACAGCCGACACTGAAGATTTGTGGTGAAAGAATAAACGACACCAACAAAAGGAATGCTGCAGGCAACTGTCTGAAAATTG CTACTGATCGTAATGATTTATGGTTTACCAGCTCGCCAAGCGTTGCAGTGATGGACCAGCTTGGGTATAGCATAAACGAT GAGAGCAACAACACTGGTGATACATATGCAGGTTCGTTTTACGAGGATGGACAGTTTGGGCCTAGAGGTTATTATGCGGT GTTTATGCAGGCTGGTGATGGTGTCTCTCCCCCTGGTAGTGCTAATGCCGGTGTTAACGGGCAGTTTGACCGTTGGTGCC AAAAGCTTAATGATTTTGGGTTTGGTGGAAGAACAACATGGGAGCGCCCAACACTGGCTGAGTTGGTCTCACTTCAGGAC ACTTATGACAACCTGTTGTTAAGGCGTGGTTTTCCGGTCCGGTTCAATTACTGGTCGTCGGATGTCAAAGTCGATAGTTA CGACTTCTACACTGCGTCCCTGAGATATTACTCACCCAGCTGGAGCCGACCCGATTCCATGAACTTCGGGTCCTGCATCT CAAAACGTCCTTAG
Upstream 100 bases:
>100_bases AGCGTGAGGATGGACTCATGATTGCAACGCGAACCTTGCTTGTGATGGTGGCTTATATGATAGCCGCGAATGTGTTGATG CTCATCGCCTTTGGCGCATA
Downstream 100 bases:
>100_bases TGTTTTACGTTCAGCGTTTGACGTTTAAATTTTAATATTTTTGGCGCCATCCTTATGGTTGGCGTCTTATTCTCGGAGTT TATTTTGTGAATATTGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 857; Mature: 857
Protein sequence:
>857_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVT LESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVD ETITIEVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP VATDASFRMESDESPKTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPDHAGFHYVKYVVTDHKGG YGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFARAEDSCQSKGRLPTSDE LKALAQYNNGQVISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQA VVAVKLTRDDMPVEGQLLEASAPNRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNIKYDGETLLTQNVTFVADEATA RLVLEVTKNNVSYDDSTGNEVEATMLDDNNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTT VTVTGSYTPQSTGTPISDTAEITFISPQPTLKICGERINDTNKRNAAGNCLKIATDRNDLWFTSSPSVAVMDQLGYSIND ESNNTGDTYAGSFYEDGQFGPRGYYAVFMQAGDGVSPPGSANAGVNGQFDRWCQKLNDFGFGGRTTWERPTLAELVSLQD TYDNLLLRRGFPVRFNYWSSDVKVDSYDFYTASLRYYSPSWSRPDSMNFGSCISKRP
Sequences:
>Translated_857_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVT LESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVD ETITIEVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP VATDASFRMESDESPKTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPDHAGFHYVKYVVTDHKGG YGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFARAEDSCQSKGRLPTSDE LKALAQYNNGQVISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQA VVAVKLTRDDMPVEGQLLEASAPNRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNIKYDGETLLTQNVTFVADEATA RLVLEVTKNNVSYDDSTGNEVEATMLDDNNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTT VTVTGSYTPQSTGTPISDTAEITFISPQPTLKICGERINDTNKRNAAGNCLKIATDRNDLWFTSSPSVAVMDQLGYSIND ESNNTGDTYAGSFYEDGQFGPRGYYAVFMQAGDGVSPPGSANAGVNGQFDRWCQKLNDFGFGGRTTWERPTLAELVSLQD TYDNLLLRRGFPVRFNYWSSDVKVDSYDFYTASLRYYSPSWSRPDSMNFGSCISKRP >Mature_857_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVT LESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVD ETITIEVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP VATDASFRMESDESPKTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPDHAGFHYVKYVVTDHKGG YGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFARAEDSCQSKGRLPTSDE LKALAQYNNGQVISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQA VVAVKLTRDDMPVEGQLLEASAPNRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNIKYDGETLLTQNVTFVADEATA RLVLEVTKNNVSYDDSTGNEVEATMLDDNNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTT VTVTGSYTPQSTGTPISDTAEITFISPQPTLKICGERINDTNKRNAAGNCLKIATDRNDLWFTSSPSVAVMDQLGYSIND ESNNTGDTYAGSFYEDGQFGPRGYYAVFMQAGDGVSPPGSANAGVNGQFDRWCQKLNDFGFGGRTTWERPTLAELVSLQD TYDNLLLRRGFPVRFNYWSSDVKVDSYDFYTASLRYYSPSWSRPDSMNFGSCISKRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92367; Mature: 92367
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMAD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GQTQVSLKESVVDPQGLPVTLESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTV CCEEEEHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHEEEEEECCCCCEEEEEEEE KNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETITIEVRDPDLTAGYTLDR CCCCHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEECC EVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP EEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCC VATDASFRMESDESPKTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTF EECCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCCEEEEE KPDHAGFHYVKYVVTDHKGGYGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTSSEADL CCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCC QGVTSTSSNFDSNDADVATFNFARAEDSCQSKGRLPTSDELKALAQYNNGQVISDGWPVD CEEECCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCEE LAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQA EEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHCCCCCE VVAVKLTRDDMPVEGQLLEASAPNRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNIK EEEEEEECCCCCCCCEEEECCCCCCCEEEECCCEEEECCCCEEEEEEECCCCCCEEEEEE YDGETLLTQNVTFVADEATARLVLEVTKNNVSYDDSTGNEVEATMLDDNNNPLVGRPVTF ECCCEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEECCCEEE TSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTTVTVTGSYTPQSTGTPISDTA CCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCE EITFISPQPTLKICGERINDTNKRNAAGNCLKIATDRNDLWFTSSPSVAVMDQLGYSIND EEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEHHHCCCEECC ESNNTGDTYAGSFYEDGQFGPRGYYAVFMQAGDGVSPPGSANAGVNGQFDRWCQKLNDFG CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCC FGGRTTWERPTLAELVSLQDTYDNLLLRRGFPVRFNYWSSDVKVDSYDFYTASLRYYSPS CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECEEEEEEEEEEECCC WSRPDSMNFGSCISKRP CCCCCCCCCCCHHCCCC >Mature Secondary Structure MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLADNVLAPLASDAFNQLSMAD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GQTQVSLKESVVDPQGLPVTLESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTV CCEEEEHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHEEEEEECCCCCEEEEEEEE KNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETITIEVRDPDLTAGYTLDR CCCCHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEECC EVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAP EEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCC VATDASFRMESDESPKTFDLSAYVSDEDDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTF EECCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCCEEEEE KPDHAGFHYVKYVVTDHKGGYGVAQVKIEVVDLSAGATWGNIQMGLKLFFGPLTSSEADL CCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCC QGVTSTSSNFDSNDADVATFNFARAEDSCQSKGRLPTSDELKALAQYNNGQVISDGWPVD CEEECCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCEE LAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQA EEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHCCCCCE VVAVKLTRDDMPVEGQLLEASAPNRTNVTFDDTTLYTNDKGVAKFALNTWEAGQVPVNIK EEEEEEECCCCCCCCEEEECCCCCCCEEEECCCEEEECCCCEEEEEEECCCCCCEEEEEE YDGETLLTQNVTFVADEATARLVLEVTKNNVSYDDSTGNEVEATMLDDNNNPLVGRPVTF ECCCEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEECCCEEE TSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTTVTVTGSYTPQSTGTPISDTA CCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCE EITFISPQPTLKICGERINDTNKRNAAGNCLKIATDRNDLWFTSSPSVAVMDQLGYSIND EEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEHHHCCCEECC ESNNTGDTYAGSFYEDGQFGPRGYYAVFMQAGDGVSPPGSANAGVNGQFDRWCQKLNDFG CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCC FGGRTTWERPTLAELVSLQDTYDNLLLRRGFPVRFNYWSSDVKVDSYDFYTASLRYYSPS CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECEEEEEEEEEEECCC WSRPDSMNFGSCISKRP CCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA