Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156977192

Identifier: 156977192

GI number: 156977192

Start: 1170545

End: 1170673

Strand: Direct

Name: 156977192

Synonym: VIBHAR_05978

Alternate gene names: NA

Gene position: 1170545-1170673 (Clockwise)

Preceding gene: 156977189

Following gene: 156977194

Centisome position: 53.11

GC content: 34.11

Gene sequence:

>129_bases
ATGATTGGCAACTCTGACACTCACTGGGGCATCATCATTGCTTGTTTTTTCATTAAGAATACCTATATTAATTTATCGCT
ATCCCATACATTTAAGCTTTCATTCTTTACTGAAAGCCCATTTACCTAA

Upstream 100 bases:

>100_bases
TAGCTCTTCCCCCGTCAATTTCGCACTCAATGTCAAGGCCTGCGCAGACCAACCGATAAGGCAAAGGCTACAAATTAAAA
GTTTTTTCAATAGATTGATC

Downstream 100 bases:

>100_bases
AATATGCGGTCGTGACTCAAATCGGTTAAATTACCAGTAGAATTCCCTTTCAATAAAATAGATTCACGTCACAGAACCAC
AAGAAAAAATTAACATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MIGNSDTHWGIIIACFFIKNTYINLSLSHTFKLSFFTESPFT

Sequences:

>Translated_42_residues
MIGNSDTHWGIIIACFFIKNTYINLSLSHTFKLSFFTESPFT
>Mature_42_residues
MIGNSDTHWGIIIACFFIKNTYINLSLSHTFKLSFFTESPFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4844; Mature: 4844

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGNSDTHWGIIIACFFIKNTYINLSLSHTFKLSFFTESPFT
CCCCCCCCCEEEEEEEEECCEEEEEEECCEEEEEEEECCCCC
>Mature Secondary Structure
MIGNSDTHWGIIIACFFIKNTYINLSLSHTFKLSFFTESPFT
CCCCCCCCCEEEEEEEEECCEEEEEEECCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA