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The map label for this gene is 156977110

Identifier: 156977110

GI number: 156977110

Start: 1087893

End: 1088279

Strand: Reverse

Name: 156977110

Synonym: VIBHAR_05896

Alternate gene names: NA

Gene position: 1088279-1087893 (Counterclockwise)

Preceding gene: 156977111

Following gene: 156977109

Centisome position: 49.38

GC content: 46.25

Gene sequence:

>387_bases
ATGAGTTCAACACAATACCTAATCTCTGATGCCCTTTGGGCGAAAATTGAGCCTTTGTTGCCTATCCACAAGACTAATCA
CCCTCTCGGGACACATCGAAAGAGGGTCGATAATCGCGATGCAATGAATGGAATTCTTTTTGTTCTCAGAACGGGTTGTC
AGTGGAACGCCCTTAACGCAACGGGTATTTGTACCTCTAGCTCTGCACATCGTCGCTTTCAAGAGTGGCGGGATGCTGGT
GTCTTTGAGCGATTTTGGCAAAATGGCCTGATTTATGAAGGTGTTGATTGGCGTTCTATATCAATGGATGGCTGCCAAAC
GAAAGCGCCTTTAGCAGGCTCAAAAAAACAGGTAAAAACCCAACAGACAGAGCGAAGCAAGGCGTAA

Upstream 100 bases:

>100_bases
ACAGCAAGACATAGAGTGAAGTCGTTATCAATCGGAAAGTTAAGAACCTATCTCAATAGGTGTTGTCTGAGTTAAATTAG
CACCTATTGAAATACTATAA

Downstream 100 bases:

>100_bases
AACGCAGTTTGCTTACCGACGCAAATGGATTGCCACTTGCCGTTGTCAGTGATGGTGCGAACGTCCACGATATCAAGCTG
GTACTTCAAACATTAAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: LOW QUALITY PROTEIN Transposase; Transposase IS4 Family Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase Fragment; Transposase And Inactivated Derivatives-Like; Transposase Is4-Like Protein; Transposase Protein

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSSTQYLISDALWAKIEPLLPIHKTNHPLGTHRKRVDNRDAMNGILFVLRTGCQWNALNATGICTSSSAHRRFQEWRDAG
VFERFWQNGLIYEGVDWRSISMDGCQTKAPLAGSKKQVKTQQTERSKA

Sequences:

>Translated_128_residues
MSSTQYLISDALWAKIEPLLPIHKTNHPLGTHRKRVDNRDAMNGILFVLRTGCQWNALNATGICTSSSAHRRFQEWRDAG
VFERFWQNGLIYEGVDWRSISMDGCQTKAPLAGSKKQVKTQQTERSKA
>Mature_127_residues
SSTQYLISDALWAKIEPLLPIHKTNHPLGTHRKRVDNRDAMNGILFVLRTGCQWNALNATGICTSSSAHRRFQEWRDAGV
FERFWQNGLIYEGVDWRSISMDGCQTKAPLAGSKKQVKTQQTERSKA

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14562; Mature: 14431

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTQYLISDALWAKIEPLLPIHKTNHPLGTHRKRVDNRDAMNGILFVLRTGCQWNALNA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
TGICTSSSAHRRFQEWRDAGVFERFWQNGLIYEGVDWRSISMDGCQTKAPLAGSKKQVKT
CCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEECCCCCCEECCCCCCCCCCCCCCHHHHHH
QQTERSKA
HHHHCCCC
>Mature Secondary Structure 
SSTQYLISDALWAKIEPLLPIHKTNHPLGTHRKRVDNRDAMNGILFVLRTGCQWNALNA
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
TGICTSSSAHRRFQEWRDAGVFERFWQNGLIYEGVDWRSISMDGCQTKAPLAGSKKQVKT
CCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEECCCCCCEECCCCCCCCCCCCCCHHHHHH
QQTERSKA
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA