Click here to switch to the map view.

The map label for this gene is 156977098

Identifier: 156977098

GI number: 156977098

Start: 1079296

End: 1080336

Strand: Reverse

Name: 156977098

Synonym: VIBHAR_05883

Alternate gene names: NA

Gene position: 1080336-1079296 (Counterclockwise)

Preceding gene: 156977099

Following gene: 156977097

Centisome position: 49.02

GC content: 47.45

Gene sequence:

>1041_bases
GTGAAACATGCCATCAAACGTATCGACCGATTGCTTGGTAATCGCAATCTACATCGTGAAAAAGAATCCATATATAAATG
GCATGCCTCCTTTATTACACGTGCCAATCCATTTCCAGTGGTGCTGGTTGATTGGTCAGATGTTCGAGAACAACTGCGCT
ATATGACATTACGCGCTTCGGTATCTGTTAAAGGACGTGCCGTCACGCTTTATGAGCAGGCATTCGAGTACAAAAACTAC
AACTCACCCAAGAGTCATCAACTCTTTCTCGATAAGCTTCAATCCCTGCTCCCCCAAGGCTGCACGCCCATCATTGTCTC
TGATGCGGGCTTTAGAAATACGTGGTTCCGGCAAGTGGCCAACAAAGGTTGGTTCTGGCTTGGGCGTGTACGTGGCGAAG
TCTCGATTAAGTGCGGTGAGGGCGCGTGGCTATGGAACAAAACGTTTTATCCTCAAGCAACAGATAAACCACTGTTTTTA
GGAGAAAGCCAACTTACTAGGCGTTCGCCGCTCAGGTGTTTTGCGTATTTGTATAAAGGCCAGCCCAAAGGCAGAAAAGC
GCATCGACATAGTCGAACCTGCCAGAAACACTCGGCTGGAAAAGTGTTCCATAAAGGAGCAAAAGAGCCTTGGCTTCTGG
TCACCAACATCCCGAACCATGTACTTAACGGCGTCAAAATCACTCGTTTATACGCAAAAAGAATGCAAATTGAAGAGTCG
TTCCGAGATTTGAAAAGCCCCGCTTACGGATTAGCGCTACGCCACAATCGGACACGTTGTACTAAGCGCATTGATATCTT
GCTACTCATGGCATTGATGGCCGAAATCATCATGTGGTGGAATGGCTTAATCGCCATACAAGCCAAATGGCATTATGACT
TCCAAGCTAACACAATCAAGCATCGGCGTGTGCTCTCGATCCCTAGACTGGGAAAGGAAGTACGCAGCCATCGGCGATAC
CGAATAAAAGAGTCGCAATATCATTGGGCGATGGGGGAATATCAACGCCTCACCCATACTTGCGGGGTGGGTGAATTATG
A

Upstream 100 bases:

>100_bases
AACGACTTAGATCTCTGATGCTTGCAACCAAAGCGGTTCTTGATGGCTCTAATTTAACACTCACTAAAATTGGAAGAGCT
CTCTCGACACTGATACCACA

Downstream 100 bases:

>100_bases
GGGGATCCGCCAGCGCCCGGATAAAAGTGGTAATGACAGTTTCCCTTCTAACCATACGGCTAACGCTTTTGCTTCGGCGA
CAAACCTTTATTTACGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; ISxac1 Transposase; Transposase For IS; IS10 Orf; ISCro2 Transposase; Transposase IS; IS4 Family Transposase; ISSod3 Transposase; ISSfl3 ORF

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKHAIKRIDRLLGNRNLHREKESIYKWHASFITRANPFPVVLVDWSDVREQLRYMTLRASVSVKGRAVTLYEQAFEYKNY
NSPKSHQLFLDKLQSLLPQGCTPIIVSDAGFRNTWFRQVANKGWFWLGRVRGEVSIKCGEGAWLWNKTFYPQATDKPLFL
GESQLTRRSPLRCFAYLYKGQPKGRKAHRHSRTCQKHSAGKVFHKGAKEPWLLVTNIPNHVLNGVKITRLYAKRMQIEES
FRDLKSPAYGLALRHNRTRCTKRIDILLLMALMAEIIMWWNGLIAIQAKWHYDFQANTIKHRRVLSIPRLGKEVRSHRRY
RIKESQYHWAMGEYQRLTHTCGVGEL

Sequences:

>Translated_346_residues
MKHAIKRIDRLLGNRNLHREKESIYKWHASFITRANPFPVVLVDWSDVREQLRYMTLRASVSVKGRAVTLYEQAFEYKNY
NSPKSHQLFLDKLQSLLPQGCTPIIVSDAGFRNTWFRQVANKGWFWLGRVRGEVSIKCGEGAWLWNKTFYPQATDKPLFL
GESQLTRRSPLRCFAYLYKGQPKGRKAHRHSRTCQKHSAGKVFHKGAKEPWLLVTNIPNHVLNGVKITRLYAKRMQIEES
FRDLKSPAYGLALRHNRTRCTKRIDILLLMALMAEIIMWWNGLIAIQAKWHYDFQANTIKHRRVLSIPRLGKEVRSHRRY
RIKESQYHWAMGEYQRLTHTCGVGEL
>Mature_346_residues
MKHAIKRIDRLLGNRNLHREKESIYKWHASFITRANPFPVVLVDWSDVREQLRYMTLRASVSVKGRAVTLYEQAFEYKNY
NSPKSHQLFLDKLQSLLPQGCTPIIVSDAGFRNTWFRQVANKGWFWLGRVRGEVSIKCGEGAWLWNKTFYPQATDKPLFL
GESQLTRRSPLRCFAYLYKGQPKGRKAHRHSRTCQKHSAGKVFHKGAKEPWLLVTNIPNHVLNGVKITRLYAKRMQIEES
FRDLKSPAYGLALRHNRTRCTKRIDILLLMALMAEIIMWWNGLIAIQAKWHYDFQANTIKHRRVLSIPRLGKEVRSHRRY
RIKESQYHWAMGEYQRLTHTCGVGEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40700; Mature: 40700

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHAIKRIDRLLGNRNLHREKESIYKWHASFITRANPFPVVLVDWSDVREQLRYMTLRAS
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHEEE
VSVKGRAVTLYEQAFEYKNYNSPKSHQLFLDKLQSLLPQGCTPIIVSDAGFRNTWFRQVA
EEECCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
NKGWFWLGRVRGEVSIKCGEGAWLWNKTFYPQATDKPLFLGESQLTRRSPLRCFAYLYKG
CCCCEEEEEECCEEEEEECCCEEEECCCCCCCCCCCCEEECCHHHHHCCHHHHHHHHHCC
QPKGRKAHRHSRTCQKHSAGKVFHKGAKEPWLLVTNIPNHVLNGVKITRLYAKRMQIEES
CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHH
FRDLKSPAYGLALRHNRTRCTKRIDILLLMALMAEIIMWWNGLIAIQAKWHYDFQANTIK
HHHHCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECEECCCHH
HRRVLSIPRLGKEVRSHRRYRIKESQYHWAMGEYQRLTHTCGVGEL
HHHHHCCHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKHAIKRIDRLLGNRNLHREKESIYKWHASFITRANPFPVVLVDWSDVREQLRYMTLRAS
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHEEE
VSVKGRAVTLYEQAFEYKNYNSPKSHQLFLDKLQSLLPQGCTPIIVSDAGFRNTWFRQVA
EEECCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
NKGWFWLGRVRGEVSIKCGEGAWLWNKTFYPQATDKPLFLGESQLTRRSPLRCFAYLYKG
CCCCEEEEEECCEEEEEECCCEEEECCCCCCCCCCCCEEECCHHHHHCCHHHHHHHHHCC
QPKGRKAHRHSRTCQKHSAGKVFHKGAKEPWLLVTNIPNHVLNGVKITRLYAKRMQIEES
CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHH
FRDLKSPAYGLALRHNRTRCTKRIDILLLMALMAEIIMWWNGLIAIQAKWHYDFQANTIK
HHHHCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECEECCCHH
HRRVLSIPRLGKEVRSHRRYRIKESQYHWAMGEYQRLTHTCGVGEL
HHHHHCCHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA