| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977077
Identifier: 156977077
GI number: 156977077
Start: 1049572
End: 1051047
Strand: Reverse
Name: 156977077
Synonym: VIBHAR_05862
Alternate gene names: NA
Gene position: 1051047-1049572 (Counterclockwise)
Preceding gene: 156977078
Following gene: 156977076
Centisome position: 47.69
GC content: 45.73
Gene sequence:
>1476_bases ATGTCTGCAGAAGCACAAGCTCCAGAACAAGAAGCAGCCTTAGTTGAATCAGGCTCACTTCTGGATAGCATTCTTAACGA AACTCGTTTAAAGCCAAGTGATGAAGGTTTTGACGTTGCAAAACGCGGCGTAGAAGCGTTCATCAGTGAGCTACTAAGCA GCTCGAACACAGAGAAAGTAGACCAATCTTTGGTTGACCTAATGATCTCTGAAATCGATCAAAAACTGTCTAAGCAAGTT GATGCGATTCTTCACAGCGAAGAAGTTCAAGCGATTGAGTCAACGTGGCTTGGTCTTAAGTACCTTGTTGAACACACTGA CTTCCGTGAGAACATTCAAATTGAACTGATTTCTGCGAAGAAAGATGAAGTACTTGATGACTTCGAAGACGCTCCAGAAG TGGTGAAGTCTGGCCTTTACAAACAGATCTACACACGTGAATACGGTCAATTTGGTGGTAAACCAGTTGGTGCTGTTATC TGTGATTTCGCGATGTCAGCGTCCTCTCCAGATATTAAGTTGATGGAATACATGGCGAACGTGGGTGCAATGTCTCATGC ACCTTTCATCACGTCTGCTTCGGCTAAGTTCTTTGGTCTAGATAGCTACGAAGAGCTACCAAACCTGAAAGACCTTAAGT CAGTATTCGAAGGCCCACAATACGCGAAATGGCGCGGCCTACGTGAACACGAAGATGCACGTTACCTAGGTCTATGTACG TCTCGCTTTATGCTACGTACGCCTTACTCAGTAGAAGATAACCCAATTAAGGCGTTTGACTACGATGAGCAAGTAACAGA TGGCCACGATAACTACCTATGGGGCAACTCTGCGTACGCAATGGCTTCTAAGATCAGTGAGTCATTTGCTAAGTACCGTT GGTGTCCAAACATCATTGGTCCTCAAAGTGGTGGTGCAGTTCAAGACCTGCCGGTTTATAACTTTGAAGCAATGGGTCAA ATTGAAACTAAGATCCCAACTGAGATCCTTGTTTCTGACCGTCGTGAGTACGAACTAGCAGAAGAGGGCTTTATTGCTCT AACCATGCGTAAAGGTTCTGACAACGCGGCATTCTTCTCTGCTAACTCTGTTCAAAAACCAAAAGTGTTTGCGAACACGC CAGAAGGCAAACAAGCAGAGATGAACTACAAGCTAGGTACTCAGCTTCCTTACATGTTCATCATCAACCGTCTGGCACAC TACATCAAAGTGCTACAGCGTGAGCAAATCGGTTCTTGGAAAGAGCGTTCAGACCTAGAAATCGAACTGAACAAGTGGAT CCGTCAATACGTTTCTGACCAGGAAAACCCGCCAGCGGAAGTTCGTGGTCGTCGTCCACTGCGTGCTGCTAAGGTTGAGG TATCAGACGTAGAAGGCGATCCAGGCTGGTACAAAGTATCAATGTCTGTCCGTCCTCACTTCAAGTACATGGGCGCAAGC TTCGACTTGTCTCTAGTGGGTAAACTAGACCAGTAA
Upstream 100 bases:
>100_bases AGATCGCATCGGTTCTTCAAGACGAAGAAGCGAGAAAGAAACTGTTGGATGAACTAAGCATTGGCGACGACCAAGAAGCG AAAGAAGAGTAAGGGATATC
Downstream 100 bases:
>100_bases CCCATTACTGAAACCATCAAGCAGCCAGTGAAGACTGGCTGCTTTTTTCGTAGGACCGAACATGGAAAAAGGTTATCGTC TTTTAGAGCGGATTGAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSAEAQAPEQEAALVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTEKVDQSLVDLMISEIDQKLSKQV DAILHSEEVQAIESTWLGLKYLVEHTDFRENIQIELISAKKDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVI CDFAMSASSPDIKLMEYMANVGAMSHAPFITSASAKFFGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCT SRFMLRTPYSVEDNPIKAFDYDEQVTDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGAVQDLPVYNFEAMGQ IETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGKQAEMNYKLGTQLPYMFIINRLAH YIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGAS FDLSLVGKLDQ
Sequences:
>Translated_491_residues MSAEAQAPEQEAALVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTEKVDQSLVDLMISEIDQKLSKQV DAILHSEEVQAIESTWLGLKYLVEHTDFRENIQIELISAKKDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVI CDFAMSASSPDIKLMEYMANVGAMSHAPFITSASAKFFGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCT SRFMLRTPYSVEDNPIKAFDYDEQVTDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGAVQDLPVYNFEAMGQ IETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGKQAEMNYKLGTQLPYMFIINRLAH YIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGAS FDLSLVGKLDQ >Mature_490_residues SAEAQAPEQEAALVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTEKVDQSLVDLMISEIDQKLSKQVD AILHSEEVQAIESTWLGLKYLVEHTDFRENIQIELISAKKDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVIC DFAMSASSPDIKLMEYMANVGAMSHAPFITSASAKFFGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCTS RFMLRTPYSVEDNPIKAFDYDEQVTDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGAVQDLPVYNFEAMGQI ETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKPKVFANTPEGKQAEMNYKLGTQLPYMFIINRLAHY IKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGASF DLSLVGKLDQ
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55368; Mature: 55237
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEAQAPEQEAALVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTEKV CCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH DQSLVDLMISEIDQKLSKQVDAILHSEEVQAIESTWLGLKYLVEHTDFRENIQIELISAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC KDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVICDFAMSASSPDIKLMEYMAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH VGAMSHAPFITSASAKFFGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCT CCCCCCCCCEECCCCCEECCCCHHHCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHH SRFMLRTPYSVEDNPIKAFDYDEQVTDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIG HHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCC PQSGGAVQDLPVYNFEAMGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFS CCCCCCCCCCCCCCHHHCCCHHHCCCHHHHHCCCHHHHHHCCCEEEEEEECCCCCCEEEE ANSVQKPKVFANTPEGKQAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLE CCCCCCCCEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE IELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGAS EHHHHHHHHHHCCCCCCCHHCCCCCCCHHHEEEEECCCCCCCEEEEEEEECCCHHHCCCC FDLSLVGKLDQ CCEEECCCCCC >Mature Secondary Structure SAEAQAPEQEAALVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSNTEKV CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH DQSLVDLMISEIDQKLSKQVDAILHSEEVQAIESTWLGLKYLVEHTDFRENIQIELISAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC KDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVICDFAMSASSPDIKLMEYMAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH VGAMSHAPFITSASAKFFGLDSYEELPNLKDLKSVFEGPQYAKWRGLREHEDARYLGLCT CCCCCCCCCEECCCCCEECCCCHHHCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHH SRFMLRTPYSVEDNPIKAFDYDEQVTDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIG HHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCC PQSGGAVQDLPVYNFEAMGQIETKIPTEILVSDRREYELAEEGFIALTMRKGSDNAAFFS CCCCCCCCCCCCCCHHHCCCHHHCCCHHHHHCCCHHHHHHCCCEEEEEEECCCCCCEEEE ANSVQKPKVFANTPEGKQAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLE CCCCCCCCEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE IELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGAS EHHHHHHHHHHCCCCCCCHHCCCCCCCHHHEEEEECCCCCCCEEEEEEEECCCHHHCCCC FDLSLVGKLDQ CCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA