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The map label for this gene is 156977071

Identifier: 156977071

GI number: 156977071

Start: 1041040

End: 1042344

Strand: Direct

Name: 156977071

Synonym: VIBHAR_05856

Alternate gene names: NA

Gene position: 1041040-1042344 (Clockwise)

Preceding gene: 156977065

Following gene: 156977072

Centisome position: 47.23

GC content: 44.44

Gene sequence:

>1305_bases
ATGTTTTTCAGCGACTTCGCTAGAAGGCCGATCGATGAAAGTAATCCAAGCGGCTCAAACCCTAATGGCTTAGATGATTT
TGACGAAATTAAGCGCCAGATAAATAACCTGAATAAAGTGACTGGTCGAGTATCATGGAAAACGATTCAAACACTTTCTA
AGAAAATTCTTAGTACTCAGGGGAAAGATTTTCGTTGTAGTTGCTACTTTACCGTGGCGGCTACGCACAACGATGGCTTG
AAAGGCTTGGTTGAAGGCTTGAACTCACTGCTCGACTTATGTGTTGTGTATTGGTACACCGCCTACCCAGAGCACGCGAA
GGCCAATGCACGTATCAGTGCCATCGAGTGGATGGTCGAATACACTGAGAAGCGAATTAAAAAGCATCGAGCCTTACCAG
AAGAGCTCCCGCTTATTGAAGCGGCGCATCAACTGTGTTTACGCATCGAAGAAGAACTGCGCCTACATTATGGGATTAAA
GCGCCATCATTCGGTCGCATTCGTCGTATATTGAACCAATGGATTGAAGAGATTAAAGAAACAAAAGCAAAGGAAGCTAA
AGCATTAGAAGTCAAACAAGAGAAGCCAGAAACACCATCGAATCCAGGTGGCATCCAAGTCAATATTGCGCCGCCACCAA
AAACGGAAACCAAGCCGACGCCTCAGCCGCAAGTAAAAGAAGCGCCTAAGTCCAGCCGCGCGGTTGTATTTTCTGTTATT
GGATTGCTTGTCGTTGCATTTGCTTCCCACTTTGTTTACAAGCAGCACAAATACCAGACTCTGAAAGATGACATTGAACA
CTCGTCACTAAAACAGCTAGCAGCAATCGTCGATTCATTGAGCGTTGAGAACAAAGAACACCGCATCGCTTTACGTTCTG
CGACGGTCGAACGCCTTGATGCATTAATGACCGATTGGGCAATCGATCCTGTAAAAGTCAGCGAAGTGAATACCATTGAT
GAGCTTACTAGTGAATTGACGGAGATCTACCCAGATTCATCATCTGCTCAGCAACTTCGAGAGAATTTTTTAGACCAACG
TTCTCGTTTCGAAAATGAATTCGATGTCATATACAAACGCTTTGCTTATGCTAGGACGGTATTTGCCAACGTAGCGAAAC
AGAACACCGACAGGGACTCGAAGAAAGCGTATGAATACAGCAATTCGCTGTTCCCGCTTCTTGGGCGGATTGAGTACGCA
GAAAAGAATGCGCAGCAAAAGGAAATTGAACGCTCCCTCCTTTTACTGAACGCCTACCTATATAAGATTAATCAGTTGCA
AACTGCAACAAACGACAATAAATAA

Upstream 100 bases:

>100_bases
TTTTGCCTATAAAATCCATCAAAATAAAGATGATAGTCCCGCCTTTATAAATAAAAAGTCGGCTGACTACCCTTCATATA
ATCAGTTGGAATTGGAAAAT

Downstream 100 bases:

>100_bases
CAATACAAGTAAAGAAACTATAGGCTTATGTTCAAACAAAAAATACTAAGAAACCCGATTTTGGTTTCTACCATAGTGGC
TTTGCTATTAGCCGCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Family Protein

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MFFSDFARRPIDESNPSGSNPNGLDDFDEIKRQINNLNKVTGRVSWKTIQTLSKKILSTQGKDFRCSCYFTVAATHNDGL
KGLVEGLNSLLDLCVVYWYTAYPEHAKANARISAIEWMVEYTEKRIKKHRALPEELPLIEAAHQLCLRIEEELRLHYGIK
APSFGRIRRILNQWIEEIKETKAKEAKALEVKQEKPETPSNPGGIQVNIAPPPKTETKPTPQPQVKEAPKSSRAVVFSVI
GLLVVAFASHFVYKQHKYQTLKDDIEHSSLKQLAAIVDSLSVENKEHRIALRSATVERLDALMTDWAIDPVKVSEVNTID
ELTSELTEIYPDSSSAQQLRENFLDQRSRFENEFDVIYKRFAYARTVFANVAKQNTDRDSKKAYEYSNSLFPLLGRIEYA
EKNAQQKEIERSLLLLNAYLYKINQLQTATNDNK

Sequences:

>Translated_434_residues
MFFSDFARRPIDESNPSGSNPNGLDDFDEIKRQINNLNKVTGRVSWKTIQTLSKKILSTQGKDFRCSCYFTVAATHNDGL
KGLVEGLNSLLDLCVVYWYTAYPEHAKANARISAIEWMVEYTEKRIKKHRALPEELPLIEAAHQLCLRIEEELRLHYGIK
APSFGRIRRILNQWIEEIKETKAKEAKALEVKQEKPETPSNPGGIQVNIAPPPKTETKPTPQPQVKEAPKSSRAVVFSVI
GLLVVAFASHFVYKQHKYQTLKDDIEHSSLKQLAAIVDSLSVENKEHRIALRSATVERLDALMTDWAIDPVKVSEVNTID
ELTSELTEIYPDSSSAQQLRENFLDQRSRFENEFDVIYKRFAYARTVFANVAKQNTDRDSKKAYEYSNSLFPLLGRIEYA
EKNAQQKEIERSLLLLNAYLYKINQLQTATNDNK
>Mature_434_residues
MFFSDFARRPIDESNPSGSNPNGLDDFDEIKRQINNLNKVTGRVSWKTIQTLSKKILSTQGKDFRCSCYFTVAATHNDGL
KGLVEGLNSLLDLCVVYWYTAYPEHAKANARISAIEWMVEYTEKRIKKHRALPEELPLIEAAHQLCLRIEEELRLHYGIK
APSFGRIRRILNQWIEEIKETKAKEAKALEVKQEKPETPSNPGGIQVNIAPPPKTETKPTPQPQVKEAPKSSRAVVFSVI
GLLVVAFASHFVYKQHKYQTLKDDIEHSSLKQLAAIVDSLSVENKEHRIALRSATVERLDALMTDWAIDPVKVSEVNTID
ELTSELTEIYPDSSSAQQLRENFLDQRSRFENEFDVIYKRFAYARTVFANVAKQNTDRDSKKAYEYSNSLFPLLGRIEYA
EKNAQQKEIERSLLLLNAYLYKINQLQTATNDNK

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49653; Mature: 49653

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFSDFARRPIDESNPSGSNPNGLDDFDEIKRQINNLNKVTGRVSWKTIQTLSKKILSTQ
CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
GKDFRCSCYFTVAATHNDGLKGLVEGLNSLLDLCVVYWYTAYPEHAKANARISAIEWMVE
CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
YTEKRIKKHRALPEELPLIEAAHQLCLRIEEELRLHYGIKAPSFGRIRRILNQWIEEIKE
HHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TKAKEAKALEVKQEKPETPSNPGGIQVNIAPPPKTETKPTPQPQVKEAPKSSRAVVFSVI
HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
GLLVVAFASHFVYKQHKYQTLKDDIEHSSLKQLAAIVDSLSVENKEHRIALRSATVERLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ALMTDWAIDPVKVSEVNTIDELTSELTEIYPDSSSAQQLRENFLDQRSRFENEFDVIYKR
HHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
FAYARTVFANVAKQNTDRDSKKAYEYSNSLFPLLGRIEYAEKNAQQKEIERSLLLLNAYL
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YKINQLQTATNDNK
HHHHHHHHHCCCCC
>Mature Secondary Structure
MFFSDFARRPIDESNPSGSNPNGLDDFDEIKRQINNLNKVTGRVSWKTIQTLSKKILSTQ
CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
GKDFRCSCYFTVAATHNDGLKGLVEGLNSLLDLCVVYWYTAYPEHAKANARISAIEWMVE
CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
YTEKRIKKHRALPEELPLIEAAHQLCLRIEEELRLHYGIKAPSFGRIRRILNQWIEEIKE
HHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TKAKEAKALEVKQEKPETPSNPGGIQVNIAPPPKTETKPTPQPQVKEAPKSSRAVVFSVI
HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
GLLVVAFASHFVYKQHKYQTLKDDIEHSSLKQLAAIVDSLSVENKEHRIALRSATVERLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ALMTDWAIDPVKVSEVNTIDELTSELTEIYPDSSSAQQLRENFLDQRSRFENEFDVIYKR
HHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
FAYARTVFANVAKQNTDRDSKKAYEYSNSLFPLLGRIEYAEKNAQQKEIERSLLLLNAYL
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YKINQLQTATNDNK
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA