Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977069

Identifier: 156977069

GI number: 156977069

Start: 1038294

End: 1039808

Strand: Reverse

Name: 156977069

Synonym: VIBHAR_05854

Alternate gene names: NA

Gene position: 1039808-1038294 (Counterclockwise)

Preceding gene: 156977070

Following gene: 156977068

Centisome position: 47.18

GC content: 45.87

Gene sequence:

>1515_bases
ATGCAAACACATCAGCTAGTCCTATTCATTTCAAAGTGCCCGGAGGAATATACGGGCGCGAAGCATGTTGAAATGCCAGA
AGGTGGTGGTTCAGTCGGCCGAGCACCGAGCTGTACACTGCCTTTGACTGATCATAACCGTTTCATCTCTGGCACACATT
GTCTGATCAGCGTATACGGAGACACGTACTACATCAGCGATGTGTCGACCAACGGCACAATGGTGAATGGCAACAAAATA
CTTAAGAACCAACCTGTGTCCATTGTTGATGGCGATGTGATTTCTCTGGGTCAATACGAAATTGGTGTTTCGCTAGAGCA
TGTCACAGCAGCGCAAGATATTGCTTCTGACATTGCGCCAGAACGTGTATCGAATGATCCACTCGTCAATCTCGGTGAGG
CGGTTGTAGAAGAGGAAGAAAAAGTCGGTGCATTAGAAGACTTGTTCACGGAGACCAAGCAAGATGATGTCAATACTGAC
GATCCTATTGCTCATCTAAAGTTTTCGATGCAGCGTGAAGACGACCATCTTATCCGCGATGTCGAAAAGCCAGAACCTGC
AAAGGCTAAGCCAGTCGAAAACACGCGACAAGTCGTTGATGACAGCTTCAGCATCCATTCTGAATTCGATATTCCAAACT
TAATCCCGGAAGATTGGTTGGGAGGCACTGCCACGAATAAAGCATCTGTCGAACCCGCGGCAGAACAAACTAAACAAGCG
GCGTTCATTCCAGAAGATTTTGCGCAAACGGAAGCCGTTCCACTTCAAGCTCGTAGGGTGGAACCAGAGGTTACCCAGCC
TCAAATGCCTCAATATCAAGCGCCACATAATCACGCAGCATCAAACGTTACTCAAAGAGCAGAGCCTGTTGGGCAGAAAT
GGGAAGAGGTAACGCAAGCTTTTATTCCATCAGCACAACCTACTCAGCCAGAAACGAAAGCGACAGAGAACCAAGTCGGC
TTTGTAAGCAATGATCCACTAGGAGCCGAGAGCGCTACGCATTCTTCCGATATCGGTAAAGCATTTTATGAAGGTTTGGG
TATTAGCAACCCAGATCTGATCAGCAACGAAGCTCTGTTGTTTAAACAGATGGGTACATGTCTTCGTTTATGTATCGATA
ACCTGCAAAAAGACCTGCATGAAGTTGAGTCACTCAAAGGTGAACAAGGTTTAAGTGAAGCGGATTCAAACTTAGCGGAG
CTGATGCTGACGCTAAATAGCCAGAACTTGCTGTCTCCGAATGAATTGGTGGAGCAAATGTTGGATGAGCTCAACGATCA
TCAAATTATTTTTAACAAGGCTCTCAATGAGTTGCTGATTGAACAATCAGAGACGAATGACCCTGTCACGTTTGCAAACG
ACGTTGCAAGTAAATCCATGTTCACCACCAAATCAAAGCTATGGGGTGAGTATCTTGAGTTTTACGCCAATAACCGTCGC
CAAATGAATGAGACATCATTGAAAGGCTTGATCAAGAAAAACTACACCAAAGCGATTAAGGGAAGCCATGCGTAG

Upstream 100 bases:

>100_bases
CATCCAAATCATCCCTCAAGCTTCCTATATTCTTCCTGTAGTAAATGATGGAATTGGTGGGTTAGAGCTGTCTGTTTCTC
TATTATTTTAAGGTTTAGCA

Downstream 100 bases:

>100_bases
TATAGCTATATTACTCGGATGCGCTTTGCTATCCGGTTGTTCCATGTGGGGGCAATTTAAAGAATCAACAGGCATTACGC
CAGAAACGTCCTCAATCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: FHA Domain-Containing Protein; Protein ImpI/VasC

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MQTHQLVLFISKCPEEYTGAKHVEMPEGGGSVGRAPSCTLPLTDHNRFISGTHCLISVYGDTYYISDVSTNGTMVNGNKI
LKNQPVSIVDGDVISLGQYEIGVSLEHVTAAQDIASDIAPERVSNDPLVNLGEAVVEEEEKVGALEDLFTETKQDDVNTD
DPIAHLKFSMQREDDHLIRDVEKPEPAKAKPVENTRQVVDDSFSIHSEFDIPNLIPEDWLGGTATNKASVEPAAEQTKQA
AFIPEDFAQTEAVPLQARRVEPEVTQPQMPQYQAPHNHAASNVTQRAEPVGQKWEEVTQAFIPSAQPTQPETKATENQVG
FVSNDPLGAESATHSSDIGKAFYEGLGISNPDLISNEALLFKQMGTCLRLCIDNLQKDLHEVESLKGEQGLSEADSNLAE
LMLTLNSQNLLSPNELVEQMLDELNDHQIIFNKALNELLIEQSETNDPVTFANDVASKSMFTTKSKLWGEYLEFYANNRR
QMNETSLKGLIKKNYTKAIKGSHA

Sequences:

>Translated_504_residues
MQTHQLVLFISKCPEEYTGAKHVEMPEGGGSVGRAPSCTLPLTDHNRFISGTHCLISVYGDTYYISDVSTNGTMVNGNKI
LKNQPVSIVDGDVISLGQYEIGVSLEHVTAAQDIASDIAPERVSNDPLVNLGEAVVEEEEKVGALEDLFTETKQDDVNTD
DPIAHLKFSMQREDDHLIRDVEKPEPAKAKPVENTRQVVDDSFSIHSEFDIPNLIPEDWLGGTATNKASVEPAAEQTKQA
AFIPEDFAQTEAVPLQARRVEPEVTQPQMPQYQAPHNHAASNVTQRAEPVGQKWEEVTQAFIPSAQPTQPETKATENQVG
FVSNDPLGAESATHSSDIGKAFYEGLGISNPDLISNEALLFKQMGTCLRLCIDNLQKDLHEVESLKGEQGLSEADSNLAE
LMLTLNSQNLLSPNELVEQMLDELNDHQIIFNKALNELLIEQSETNDPVTFANDVASKSMFTTKSKLWGEYLEFYANNRR
QMNETSLKGLIKKNYTKAIKGSHA
>Mature_504_residues
MQTHQLVLFISKCPEEYTGAKHVEMPEGGGSVGRAPSCTLPLTDHNRFISGTHCLISVYGDTYYISDVSTNGTMVNGNKI
LKNQPVSIVDGDVISLGQYEIGVSLEHVTAAQDIASDIAPERVSNDPLVNLGEAVVEEEEKVGALEDLFTETKQDDVNTD
DPIAHLKFSMQREDDHLIRDVEKPEPAKAKPVENTRQVVDDSFSIHSEFDIPNLIPEDWLGGTATNKASVEPAAEQTKQA
AFIPEDFAQTEAVPLQARRVEPEVTQPQMPQYQAPHNHAASNVTQRAEPVGQKWEEVTQAFIPSAQPTQPETKATENQVG
FVSNDPLGAESATHSSDIGKAFYEGLGISNPDLISNEALLFKQMGTCLRLCIDNLQKDLHEVESLKGEQGLSEADSNLAE
LMLTLNSQNLLSPNELVEQMLDELNDHQIIFNKALNELLIEQSETNDPVTFANDVASKSMFTTKSKLWGEYLEFYANNRR
QMNETSLKGLIKKNYTKAIKGSHA

Specific function: Unknown

COG id: COG3456

COG function: function code T; Uncharacterized conserved protein, contains FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55543; Mature: 55543

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTHQLVLFISKCPEEYTGAKHVEMPEGGGSVGRAPSCTLPLTDHNRFISGTHCLISVYG
CCCCEEEEEHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEECCCEEEEEEEC
DTYYISDVSTNGTMVNGNKILKNQPVSIVDGDVISLGQYEIGVSLEHVTAAQDIASDIAP
CEEEEEEECCCCEEECCCEEECCCCCEEECCCEEECCCEEECCCHHHHHHHHHHHHHCCH
ERVSNDPLVNLGEAVVEEEEKVGALEDLFTETKQDDVNTDDPIAHLKFSMQREDDHLIRD
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCHHHHHHH
VEKPEPAKAKPVENTRQVVDDSFSIHSEFDIPNLIPEDWLGGTATNKASVEPAAEQTKQA
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHC
AFIPEDFAQTEAVPLQARRVEPEVTQPQMPQYQAPHNHAASNVTQRAEPVGQKWEEVTQA
CCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FIPSAQPTQPETKATENQVGFVSNDPLGAESATHSSDIGKAFYEGLGISNPDLISNEALL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
FKQMGTCLRLCIDNLQKDLHEVESLKGEQGLSEADSNLAELMLTLNSQNLLSPNELVEQM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LDELNDHQIIFNKALNELLIEQSETNDPVTFANDVASKSMFTTKSKLWGEYLEFYANNRR
HHHCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QMNETSLKGLIKKNYTKAIKGSHA
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQTHQLVLFISKCPEEYTGAKHVEMPEGGGSVGRAPSCTLPLTDHNRFISGTHCLISVYG
CCCCEEEEEHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEECCCEEEEEEEC
DTYYISDVSTNGTMVNGNKILKNQPVSIVDGDVISLGQYEIGVSLEHVTAAQDIASDIAP
CEEEEEEECCCCEEECCCEEECCCCCEEECCCEEECCCEEECCCHHHHHHHHHHHHHCCH
ERVSNDPLVNLGEAVVEEEEKVGALEDLFTETKQDDVNTDDPIAHLKFSMQREDDHLIRD
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCHHHHHHH
VEKPEPAKAKPVENTRQVVDDSFSIHSEFDIPNLIPEDWLGGTATNKASVEPAAEQTKQA
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHC
AFIPEDFAQTEAVPLQARRVEPEVTQPQMPQYQAPHNHAASNVTQRAEPVGQKWEEVTQA
CCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FIPSAQPTQPETKATENQVGFVSNDPLGAESATHSSDIGKAFYEGLGISNPDLISNEALL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
FKQMGTCLRLCIDNLQKDLHEVESLKGEQGLSEADSNLAELMLTLNSQNLLSPNELVEQM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LDELNDHQIIFNKALNELLIEQSETNDPVTFANDVASKSMFTTKSKLWGEYLEFYANNRR
HHHCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QMNETSLKGLIKKNYTKAIKGSHA
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA