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The map label for this gene is nahR [H]

Identifier: 156977058

GI number: 156977058

Start: 1027026

End: 1027937

Strand: Reverse

Name: nahR [H]

Synonym: VIBHAR_05843

Alternate gene names: 156977058

Gene position: 1027937-1027026 (Counterclockwise)

Preceding gene: 156977059

Following gene: 156977057

Centisome position: 46.64

GC content: 43.09

Gene sequence:

>912_bases
TTGATTCTATTTGGTAACCACGCTGTGAATAAAGATCTCGACCTAAATCTCCTCAAAATTCTTGTGTTGCTGGAGCGTCA
TCGTCAACTTAAACCTGTCGCGAAAGCGTTGGGTAAAAGCGAAGCGTCTATAAGTAAGTATCTCACCCGTTTACGAACGC
AATTAGAGGATGAACTGTTTATCCGACACGCTCATCACTTTGAGCCTACGCATTATCTAAAGAGGAAGTTGCCCGAAATT
ACGAATGCACTTGATCAGCTAGAAACCTGCTTGATTAGACGTGAGTTTGATCCTCTGTCTTATGACAGGAGCATCACCAT
CTGTTTGCCACAATCCGCGCAGCAATCCTTTGGCCACCTGCTGTTGGATGATCTGATGGAGTTGTTTCCTAATGCCCACG
TCAATGTTGCAAGCAGCACGGATAGCACGATCGATGAAATCCTTGAAGATAAAGTCGATATGCAATTGCATTACTTTAAT
GAGGAATACCCAAAATCCATTCATCAGCAATTTATTGGTTACGCTCCTGCCGTCATCGTCGTGCCTGCCGATTTAGGTAT
TACTGAAGTAGAAAAAGCGTGTGAGCTTAAATTTATTCTACTTGAGTTGGCAGGCTGGAAGGACAGGGAACAAGTCACTA
AACGAGCCCTTGAGCAGAGCGGACTTAACATTGATCGAGTCGCTACTATCGGAAATATAACCAGCTTACTTAAGGTTATT
AGAATGAGAGGGGCAGCGACGATTTTACTTGAGTATCAAAAACCAATTGATGGCTTTAATTTTATTCCTGTACCTGAAAC
TTTTTATCCGCAGGGGCGCCCAAATGTGGTGGTACAAATGAAGCAAACGCATCGCTACAACTCGATGCACCAGCTATTAA
CTGATGCTATCGCGAAATATGTGATTACTTAG

Upstream 100 bases:

>100_bases
TGACCAAAACGTGACTTTAGTCTCCTATAGTTAATCAGCCTATGAAAAGGCTGCTTTCTTTGTATTTGGCCGAAAGTAAT
TATAAAAATATAATTAGTCT

Downstream 100 bases:

>100_bases
AACCTATCTCAATAGGTGTTGTCTGAGTTAAATTAGCACCTATTGAAATACTATAAATGAGTTCAACACAATACCTAATC
TCTGATGCCCTTTGGGCGAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MILFGNHAVNKDLDLNLLKILVLLERHRQLKPVAKALGKSEASISKYLTRLRTQLEDELFIRHAHHFEPTHYLKRKLPEI
TNALDQLETCLIRREFDPLSYDRSITICLPQSAQQSFGHLLLDDLMELFPNAHVNVASSTDSTIDEILEDKVDMQLHYFN
EEYPKSIHQQFIGYAPAVIVVPADLGITEVEKACELKFILLELAGWKDREQVTKRALEQSGLNIDRVATIGNITSLLKVI
RMRGAATILLEYQKPIDGFNFIPVPETFYPQGRPNVVVQMKQTHRYNSMHQLLTDAIAKYVIT

Sequences:

>Translated_303_residues
MILFGNHAVNKDLDLNLLKILVLLERHRQLKPVAKALGKSEASISKYLTRLRTQLEDELFIRHAHHFEPTHYLKRKLPEI
TNALDQLETCLIRREFDPLSYDRSITICLPQSAQQSFGHLLLDDLMELFPNAHVNVASSTDSTIDEILEDKVDMQLHYFN
EEYPKSIHQQFIGYAPAVIVVPADLGITEVEKACELKFILLELAGWKDREQVTKRALEQSGLNIDRVATIGNITSLLKVI
RMRGAATILLEYQKPIDGFNFIPVPETFYPQGRPNVVVQMKQTHRYNSMHQLLTDAIAKYVIT
>Mature_303_residues
MILFGNHAVNKDLDLNLLKILVLLERHRQLKPVAKALGKSEASISKYLTRLRTQLEDELFIRHAHHFEPTHYLKRKLPEI
TNALDQLETCLIRREFDPLSYDRSITICLPQSAQQSFGHLLLDDLMELFPNAHVNVASSTDSTIDEILEDKVDMQLHYFN
EEYPKSIHQQFIGYAPAVIVVPADLGITEVEKACELKFILLELAGWKDREQVTKRALEQSGLNIDRVATIGNITSLLKVI
RMRGAATILLEYQKPIDGFNFIPVPETFYPQGRPNVVVQMKQTHRYNSMHQLLTDAIAKYVIT

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34725; Mature: 34725

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILFGNHAVNKDLDLNLLKILVLLERHRQLKPVAKALGKSEASISKYLTRLRTQLEDELF
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IRHAHHFEPTHYLKRKLPEITNALDQLETCLIRREFDPLSYDRSITICLPQSAQQSFGHL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHH
LLDDLMELFPNAHVNVASSTDSTIDEILEDKVDMQLHYFNEEYPKSIHQQFIGYAPAVIV
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCEEEE
VPADLGITEVEKACELKFILLELAGWKDREQVTKRALEQSGLNIDRVATIGNITSLLKVI
EECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RMRGAATILLEYQKPIDGFNFIPVPETFYPQGRPNVVVQMKQTHRYNSMHQLLTDAIAKY
HHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
VIT
HCC
>Mature Secondary Structure
MILFGNHAVNKDLDLNLLKILVLLERHRQLKPVAKALGKSEASISKYLTRLRTQLEDELF
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IRHAHHFEPTHYLKRKLPEITNALDQLETCLIRREFDPLSYDRSITICLPQSAQQSFGHL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHH
LLDDLMELFPNAHVNVASSTDSTIDEILEDKVDMQLHYFNEEYPKSIHQQFIGYAPAVIV
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCEEEE
VPADLGITEVEKACELKFILLELAGWKDREQVTKRALEQSGLNIDRVATIGNITSLLKVI
EECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RMRGAATILLEYQKPIDGFNFIPVPETFYPQGRPNVVVQMKQTHRYNSMHQLLTDAIAKY
HHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
VIT
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]