Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977054

Identifier: 156977054

GI number: 156977054

Start: 1023698

End: 1024231

Strand: Reverse

Name: 156977054

Synonym: VIBHAR_05839

Alternate gene names: NA

Gene position: 1024231-1023698 (Counterclockwise)

Preceding gene: 156977055

Following gene: 156977053

Centisome position: 46.47

GC content: 49.06

Gene sequence:

>534_bases
ATGATGATGGCCCTACTTAGTGCAGGCCTTATCGGACAAAATGTATATGCATTACCATCAACTTCTAATATTGAATGGGT
CGGTGTGGTGCCTGGAGGGATTAACGGTGATCAAATTGGTCTGACAGGTCAAAACGGCGGTACTGTTAACCAGGGTGAGC
TGGCTATAACACAAGACGGCGCCTTTACTACGCGATTACCTGTCACTCTCGAAGCGCATGAGATGGTTGACGACGGCGGT
GTTCTTGTGCCTGGTCCTAATTTCTATCCTGGTGAAGTGAATTGGACTTTGGGCTCTGTCTATGTAACCAACCCGGCGTA
TGATACTACGGACGAGGGCAATGACGTTAAAATCGTGATGAACGGTCATGAGCTTAGTAGAGGTACCCCAGTGAAGATTG
CAGAGGGCTTGCACCAAATGCAATTTAGCGCATCGTCTGAAGGTCCGACTAATGGTTCAGTCCTTCCGAATCAGACTGTC
GTGGCCACGGCGACGATCTTTGCTGAAGGAACGGGCGGCGATCCTAATTCTTAA

Upstream 100 bases:

>100_bases
ACCGCATATTTTAGGTAAATGGGCTTTCAGTAAAGAATGAAAGCTTAAATTTATGGGATAGCGATAAATTAATATAGGTA
TTCTTAATGAAAAACAAGCA

Downstream 100 bases:

>100_bases
GGCATATATACCCAAGTAACCTCGAGATGCAAGGTTCAGCGAGAATGACTTGGTTTGTAGACGCGGCGGCGATTTAAAGA
TTTAGTCACTCTAAATCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MMMALLSAGLIGQNVYALPSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELAITQDGAFTTRLPVTLEAHEMVDDGG
VLVPGPNFYPGEVNWTLGSVYVTNPAYDTTDEGNDVKIVMNGHELSRGTPVKIAEGLHQMQFSASSEGPTNGSVLPNQTV
VATATIFAEGTGGDPNS

Sequences:

>Translated_177_residues
MMMALLSAGLIGQNVYALPSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELAITQDGAFTTRLPVTLEAHEMVDDGG
VLVPGPNFYPGEVNWTLGSVYVTNPAYDTTDEGNDVKIVMNGHELSRGTPVKIAEGLHQMQFSASSEGPTNGSVLPNQTV
VATATIFAEGTGGDPNS
>Mature_177_residues
MMMALLSAGLIGQNVYALPSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELAITQDGAFTTRLPVTLEAHEMVDDGG
VLVPGPNFYPGEVNWTLGSVYVTNPAYDTTDEGNDVKIVMNGHELSRGTPVKIAEGLHQMQFSASSEGPTNGSVLPNQTV
VATATIFAEGTGGDPNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18275; Mature: 18275

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMALLSAGLIGQNVYALPSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELAITQDG
CEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEECC
AFTTRLPVTLEAHEMVDDGGVLVPGPNFYPGEVNWTLGSVYVTNPAYDTTDEGNDVKIVM
CEEEEEEEEEEHHHEECCCCEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEE
NGHELSRGTPVKIAEGLHQMQFSASSEGPTNGSVLPNQTVVATATIFAEGTGGDPNS
CCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MMMALLSAGLIGQNVYALPSTSNIEWVGVVPGGINGDQIGLTGQNGGTVNQGELAITQDG
CEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEECC
AFTTRLPVTLEAHEMVDDGGVLVPGPNFYPGEVNWTLGSVYVTNPAYDTTDEGNDVKIVM
CEEEEEEEEEEHHHEECCCCEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEE
NGHELSRGTPVKIAEGLHQMQFSASSEGPTNGSVLPNQTVVATATIFAEGTGGDPNS
CCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA